YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: psq-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..137] PSI-BLAST 10.39794 No description for 2ihcA was found.
2 View Details [138..204] deduced N/A No confident structure predictions are available.
3 View Details [205..310] PSI-BLAST 11.39794 No description for 2dlqA was found.
4 View Details [311..440] PSI-BLAST 42.0 No description for 2i13A was found.
5 View Details [441..609] PSI-BLAST 14.221849 Transcription factor IIIA, TFIIIA
6 View Details [610..670] deduced N/A No confident structure predictions are available.
7 View Details [671..917] FFAS03 1.08 No description for 2q1zA was found.
8 View Details [918..1046] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • transcription regulator activity
  • 4.70988788192472 bayes_pls_golite062009
  • nucleic acid binding
  • 4.58713908116892 bayes_pls_golite062009
  • DNA binding
  • 4.56219307357342 bayes_pls_golite062009
  • transcription activator activity
  • 3.52873291636993 bayes_pls_golite062009
  • transcription factor activity
  • 3.50954949535763 bayes_pls_golite062009
  • transcription repressor activity
  • 3.27542149084008 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 3.22082323675675 bayes_pls_golite062009
  • binding
  • 3.10743787485868 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.53101891154822 bayes_pls_golite062009
  • chromatin binding
  • 2.18464662431232 bayes_pls_golite062009
  • protein binding
  • 2.05530362750351 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 1.63161912031789 bayes_pls_golite062009
  • transcription factor binding
  • 1.39608963544799 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.34049786451995 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.77874411480713 bayes_pls_golite062009
  • catalytic activity
  • 0.245893663605433 bayes_pls_golite062009
    4 No functions predicted.
    5
    Term Confidence Notes
  • transcription regulator activity
  • 4.70988788192472 bayes_pls_golite062009
  • nucleic acid binding
  • 4.58713908116892 bayes_pls_golite062009
  • DNA binding
  • 4.56219307357342 bayes_pls_golite062009
  • transcription activator activity
  • 3.52873291636993 bayes_pls_golite062009
  • transcription factor activity
  • 3.50954949535763 bayes_pls_golite062009
  • transcription repressor activity
  • 3.27542149084008 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 3.22082323675675 bayes_pls_golite062009
  • binding
  • 3.10743787485868 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.53101891154822 bayes_pls_golite062009
  • chromatin binding
  • 2.18464662431232 bayes_pls_golite062009
  • protein binding
  • 2.05530362750351 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 1.63161912031789 bayes_pls_golite062009
  • transcription factor binding
  • 1.39608963544799 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.34049786451995 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.77874411480713 bayes_pls_golite062009
  • catalytic activity
  • 0.245893663605433 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle