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Protein Overview: UBP6

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen UBP6 YIL168W 2 Unpublished Fields Lab Data
View Screen UBP6 CSR2 2 Unpublished Fields Lab Data
View Screen UBP6 BNA4 2 Unpublished Fields Lab Data
View Screen UBP6 TSC13 2 Unpublished Fields Lab Data
View Screen UBP6 CYS3 2 Unpublished Fields Lab Data
View Screen UBP6 SSA3 1 Unpublished Fields Lab Data
View Screen UBP6 MSW1 1 Unpublished Fields Lab Data
View Screen UBP6 PEX18 1 Unpublished Fields Lab Data
View Screen UBP6 CRT10 1 Unpublished Fields Lab Data
View Screen UBP6 ATH1 1 Unpublished Fields Lab Data
View Screen UBP6 PET112 1 Unpublished Fields Lab Data
View Screen UBP6 YDR306C 1 Unpublished Fields Lab Data
View Screen UBP6 NUF2 1 Unpublished Fields Lab Data
View Screen UBP6 OMS1 1 Unpublished Fields Lab Data
View Screen UBP6 JSN1 1 Unpublished Fields Lab Data
View Screen UBP6 YOL083W 1 Unpublished Fields Lab Data
View Screen UBP6 CTF4 1 Unpublished Fields Lab Data
View Screen UBP6 SPC110 1 Unpublished Fields Lab Data
View Screen UBP6 NAP1 1 Unpublished Fields Lab Data
View Screen UBP6 RTC1 1 Unpublished Fields Lab Data
View Screen UBP6 KRE6 1 Unpublished Fields Lab Data
View Screen UBP6 YFH1 1 Unpublished Fields Lab Data
View Screen UBP6 SHE9 1 Unpublished Fields Lab Data
View Screen UBP6 RTT109 1 Unpublished Fields Lab Data
View Screen UBP6 WHI2 1 Unpublished Fields Lab Data
View Screen UBP6 DPB2 1 Unpublished Fields Lab Data
View Screen UBP6 RPL4B 1 Unpublished Fields Lab Data
View Screen UBP6 YDR415C 1 Unpublished Fields Lab Data
View Screen UBP6 IRC20 1 Unpublished Fields Lab Data
View Screen UBP6 ALG8 1 Unpublished Fields Lab Data
View Screen UBP6 GDB1 1 Unpublished Fields Lab Data
View Screen UBP6 KRS1 1 Unpublished Fields Lab Data
View Screen UBP6 YDR532C 1 Unpublished Fields Lab Data
View Screen UBP6 FKS1 1 Unpublished Fields Lab Data
View Screen UBP6 GYP1 1 Unpublished Fields Lab Data
View Screen UBP6 PST1 1 Unpublished Fields Lab Data
View Screen UBP6 YDR541C 1 Unpublished Fields Lab Data
View Screen UBP6 SPT5 1 Unpublished Fields Lab Data
View Screen UBP6 SLP1 1 Unpublished Fields Lab Data
View Screen UBP6 AFR1 1 Unpublished Fields Lab Data
View Screen UBP6 SPF1 1 Unpublished Fields Lab Data
View Screen UBP6 ARG81 1 Unpublished Fields Lab Data
View Screen UBP6 SWT1 1 Unpublished Fields Lab Data
View Screen UBP6 KGD2 1 Unpublished Fields Lab Data
View Screen UBP6 RPN14 1 Unpublished Fields Lab Data
View Screen UBP6 SKY1 1 Unpublished Fields Lab Data
View Screen UBP6 SEC63 1 Unpublished Fields Lab Data
View Screen UBP6 SEC1 1 Unpublished Fields Lab Data
View Screen UBP6 LYS5 1 Unpublished Fields Lab Data
View Screen UBP6 YMR316C-A 1 Unpublished Fields Lab Data
View Screen UBP6 BUD7 1 Unpublished Fields Lab Data
View Screen UBP6 ATC1 1 Unpublished Fields Lab Data
View Screen UBP6 YGR026W 1 Unpublished Fields Lab Data
View Screen UBP6 PAU19 1 Unpublished Fields Lab Data
View Screen UBP6 PYK2 1 Unpublished Fields Lab Data
View Screen UBP6 RVB1 1 Unpublished Fields Lab Data
View Screen UBP6 YHL018W 1 Unpublished Fields Lab Data
View Screen UBP6 SKO1 1 Unpublished Fields Lab Data
View Screen UBP6 SOG2 1 Unpublished Fields Lab Data
View Screen UBP6 TPD3 1 Unpublished Fields Lab Data
View Screen UBP6 RAV2 1 Unpublished Fields Lab Data
View Screen UBP6 ECM29 1 Unpublished Fields Lab Data
View Screen UBP6 ATG4 1 Unpublished Fields Lab Data
View Screen UBP6 SYH1 1 Unpublished Fields Lab Data
View Screen UBP6 APN2 1 Unpublished Fields Lab Data
View Screen UBP6 RMD5 1 Unpublished Fields Lab Data
View Screen UBP6 VMR1 1 Unpublished Fields Lab Data
View Screen UBP6 BSC5 1 Unpublished Fields Lab Data
View Screen UBP6 CAR1 1 Unpublished Fields Lab Data
View Screen UBP6 YBL055C 1 Unpublished Fields Lab Data
View Screen UBP6 YAP6 1 Unpublished Fields Lab Data
View Screen UBP6 YHR080C 1 Unpublished Fields Lab Data
View Screen UBP6 THI20 1 Unpublished Fields Lab Data
View Screen UBP6 YPL260W 1 Unpublished Fields Lab Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

  PROTEIN(S) PUBLICATION
View Data UBP6 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..80] PSI-BLAST 8.39794 Ubiquitin
2 View Details [81..155] Pfam 14.031517 No description for PF00442 was found. No confident structure predictions are available.
3 View Details [156..425] MSA 6.241996 View MSA. No confident structure predictions are available.
4 View Details [426..499] Pfam 29.619789 Ubiquitin carboxyl-terminal hydrolase No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • small conjugating protein ligase activity
  • 3.22676362920771 bayes_pls_golite062009
  • hydrolase activity
  • 2.77871378503369 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 2.46621820231139 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.24025972049145 bayes_pls_golite062009
  • binding
  • 2.19381585790185 bayes_pls_golite062009
  • protein tag
  • 1.93603588492737 bayes_pls_golite062009
  • protein binding
  • 1.84908810286528 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 1.54640383227873 bayes_pls_golite062009
  • SUMO ligase activity
  • 0.58905960362002 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.536856055841234 bayes_pls_golite062009
  • kinase activity
  • 0.506057697290914 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.410719674374641 bayes_pls_golite062009
  • nucleic acid binding
  • 0.383121378043805 bayes_pls_golite062009
  • protein kinase activity
  • 0.325253662829604 bayes_pls_golite062009
  • transferase activity
  • 0.236208643697075 bayes_pls_golite062009
  • DNA binding
  • 0.0840213088061073 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0485636215870291 bayes_pls_golite062009
    2
    Term Confidence Notes
  • peptidase activity
  • 7.38847948226412 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 7.21002260103248 bayes_pls_golite062009
  • endopeptidase activity
  • 6.57191549077589 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 6.54685807643041 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 6.39247995905454 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 5.91394445088241 bayes_pls_golite062009
  • hydrolase activity
  • 4.82615927403291 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 4.1832081096766 bayes_pls_golite062009
  • thiolester hydrolase activity
  • 2.96735553959103 bayes_pls_golite062009
  • SUMO-specific protease activity
  • 2.65263825059319 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
  • 1.95802900199539 bayes_pls_golite062009
  • binding
  • 1.3276268995308 bayes_pls_golite062009
  • catalytic activity
  • 1.05972260874031 bayes_pls_golite062009
  • protein binding
  • 0.854677025220204 bayes_pls_golite062009
  • NEDD8-specific protease activity
  • 0.687958315289315 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.495951820083869 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.467924587720185 bayes_pls_golite062009
  • nucleic acid binding
  • 0.439226369799415 bayes_pls_golite062009
  • calcium-dependent cysteine-type endopeptidase activity
  • 0.196538841514154 bayes_pls_golite062009
  • DNA binding
  • 0.168761518285256 bayes_pls_golite062009
  • transferase activity
  • 0.0852393573521809 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle