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Protein Overview: YDR306C

General Information:
Name(s) found: YDR306C [SGD]
Description(s) found:
Found 25 descriptions.
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  • F-box protein of unknown function; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [ISSLink to PubMed article]
    Biological Process: ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKSRPKKI KAPYRKYVAG EGFSSTRNDN KAKEFTITIP EDAELIETPQ GSYYYDETND  60
   61 TIVKLTRLSN EKKDKKGRKQ SPSSSSTSSS KGEKNGKVIE SEEARMHSVS VKMVLPWEIQ 120
  121 HRIIHYLDIP EKEEKLNKTA NGKKTTTGIN MNYLLVCRNW YAMCLPKLYY APALTSKNFN 180
  181 GFVDTIIINK KKNLGHYVFE LNLSTILQSG RNSFVSKLLR RCCSNLTKFI APQTSFGYAP 240
  241 LISLKSCHDL KFLDLGLVSE TVKLKELFSA IKNFTKLTHL SFPRSSIDCQ GFQDIQWPQN 300
  301 LRYLKLSGGI TNEFVIDTKW PTTITTLEFS YCPQITELSI YSLLSQIGDN LKHLFFHYPM 360
  361 PSLAENSLDH VFTYCANLIS LQLMVDYCSK WCFSEFMLSK LVEYDRPLKT LYLECSGSLG 420
  421 LASKIHPDDL TIAILESRLP CLKNICVSPK LGWNMKSDEV ADLVVSLEDQ DGSLYLNY

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) SPC2 YDR306C
    View Details Ho Y, et al. (2002) CDC53 MDH1 PGM2 SAH1 SKP1 SRV2 STI1 YDR306C
    View Details Qiu et al. (2008) HRT3 YDR306C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..478] deduced N/A No confident structure predictions are available.
    2 View Details [94..478] FFAS03 4.27 Skp2; Cyclin A/CDK2-associated p19, Skp2


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle