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Protein Overview: KU80_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..530] PSI-BLAST 102.0 Ku80 subunit
2 View Details [531..680] PSI-BLAST 45.30103 Three-dimensional structure of Ku80 CTD

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • double-stranded telomeric DNA binding
  • 8.29108426371603 bayes_pls_golite062009
  • telomeric DNA binding
  • 5.16364366157397 bayes_pls_golite062009
  • binding
  • 2.75824485094584 bayes_pls_golite062009
  • protein binding
  • 2.58357303743968 bayes_pls_golite062009
  • promoter binding
  • 2.1752902301709 bayes_pls_golite062009
  • transcription activator activity
  • 1.52393053398849 bayes_pls_golite062009
  • transcription regulator activity
  • 1.27592771659837 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.985753648509262 bayes_pls_golite062009
  • protein complex binding
  • 0.94234534987624 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.814975395718076 bayes_pls_golite062009
  • protein dimerization activity
  • 0.73404855126602 bayes_pls_golite062009
  • DNA helicase activity
  • 0.720743494912414 bayes_pls_golite062009
  • nucleic acid binding
  • 0.655463239522058 bayes_pls_golite062009
  • protein heterodimerization activity
  • 0.64812784969409 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.506640285146188 bayes_pls_golite062009
  • DNA binding
  • 0.496246846559375 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.450760554291027 bayes_pls_golite062009
  • receptor binding
  • 0.234020194580985 bayes_pls_golite062009
  • transcription repressor activity
  • 0.233577421367532 bayes_pls_golite062009
  • protein C-terminus binding
  • 0.15516806759612 bayes_pls_golite062009
  • identical protein binding
  • 0.125363466534611 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle