YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YAR028W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPSENTDV KMDTLDEPSA HLIEENVALP EDTFSSHLSY VLYEIAHCKP IMFMIIIIVS  60
   61 LISLIVLFHD NDGCTVILVM SLIVASMALM VVAAFTFGKA ITEQEFMIKL LVEVIARKPA 120
  121 GKEWGTVAYN MNQYLFMKRL WYTPYYFYSG KKCHEFFTTL IKEVNSGSHS DSSSNSAEDT 180
  181 QSPVSAGKTS NGLNNFYSIR SDPILMAYVL KATQIEKEAQ SEYWRKQYPD ADLP

Type	Start	End	Confidence
Cytoplasmic	1	47	0.92
Transmembrane Helix	48	69	0.90
Non-Cytoplasmic	70	75	0.82
Transmembrane Helix	76	98	0.94
Cytoplasmic	99	234	0.94