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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67549423, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRPAGSRVC RRARESVASY SPWRSFVSGY CRRSPSDAPD APNAIHDCTG RHVTPRHALC  60
   61 CRDGRPRSEP RHRARRAARR SQRDRRRAPA GLKRVRDEPH ARALARGHRR PAARARRTPA 120
  121 RADAARDGVA RARARGRTRS AGRAAAGSGR PRPRDAVGHL HAARGGVVHG DAGRPGRRRD 180
  181 RRRRARRARA LRAAARARPR AAARRLGRSR HRQARRRRAG AAHARAVSRR ARRGGAQRPP 240
  241 AVRRGQNHAG ALRGLPPRDR GAARRLRRPG RRRRAHGGGR AQRPRGRARL SGCDARRGRH 300
  301 RPDRAGAALE PRQRAHAGAR GCARAAQLRD PGQVARDPDL GAVAPAHARR PGASAAARRR 360
  361 HRRLHACVSA KPRAAPPALT VHGTAAPSFS TPFAAAVPWP PGAGRRATPR GGAPGRSAKM 420
  421 PHFPSCPARS SMQPASSARS AAHGADDASS ARDLVYGPND RPAPTIAFVA ALQHLLAIIV 480
  481 PIVTPGLLIC QALGVASRDT TLIVSMSLVI SGIATFVQCK RFGPLGAGLL IVQGTSFNFV 540
  541 GPLIAGGSVM VKQGTPVETV MAAIFGVVIA GSFVEMAVSR ILPFVKRLIT PLVTGIVVLL 600
  601 IGLTLIKVGL VSMGGGYGAM ANGTFASAQN LTLSCVVLGT IIVLNRVPIV WVRSTALVIA 660
  661 LAIGYAVAAA LGRLDFTGMH QAALFQVPTP LHFGIGFSWS LFVPMLIIYL VTSLEAIGDV 720
  721 TATSKISNEP VEGPVWMRRI KGGVLVNGAN SLLAGVFNTF PSSVFAQNNG VIQITGVASR 780
  781 YVGIWIAAML VVLGLFPVVA GALQAVPEPV LGGAAMVMFG AVAASGINIL SGVHLDRRAL 840
  841 LIIAVSLALG LGVSQVPDIL NSLPHALKNV LASGVATGGI CALVMNWFLP ERQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle