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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18252341
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFSMHS RTVAIVMTMA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GGTLALEECA 180
  181 LWMPTRTGLE LQLSYTLRQQ NPVGYTVPIH LPVINQVFSS NRAVKISPNS PVARLRQLAG 240
  241 RHIPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNIAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILRSSN LLATLVNDVL DLSRLEDGSL QLEIATFNLH 420
  421 SVFREVHNLI KPVASVKKLS VTLNIAADLP MYAIGDEKRL MQTILNVVGN AVKFSKEGSI 480
  481 SITAFVAKSE SLRDFRAPDF FPVQSDNHFY LRVQVKDSGS GINPQDIPKL FTKFAQTQTL 540
  541 ATRNSGGSGL GLAICKRYVN LMEGHIWIES EGLGKGCTAT FIVKLGFPER SNESKLPFGP 600
  601 KLQANHVQTN FPGLKVLVMD DNGVSRSVTK GLLAHLGCDV TAVSLIDESL HVISQEHKVV 660
  661 FMDVSMPGID GYELAVRIHE KFTKRHERPA LVALTGSIDK ITKENCMRVG VDGVILKPVS 720
  721 VDKMRSVLSE ILEHRVLFEA M

YRC Informatics Platform - Version 3.0
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