YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|188017530, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLSNENDR RLKSAVPPTN SGILCIIAAF FGNLPFFGAF ALLTFEEIHM SLPHCPKCNS  60
   61 EYTYEDNGMY ICPECAYEWN DAEPAQESDE LIVKDANGNL LADGDSVTII KDLKVKGSSS 120
  121 MLKIGTKVKN IRLVEGDHNI DCKIDGFGPM KLKSEFVKKN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	43	0.93
Non-Cytoplasmic	44	160	0.96