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View Structure Prediction Details

Protein: gi|25403243, gi|...
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25403243, gi|....

Description E-value Query
Range
Subject
Range
gi|23125759 - gi|23125759|ref|ZP_00107678.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
319.0 [0..6] [436..3800]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNVEILSR EIVKPSSPTP DDKRILNLSL LDILSSPMYT GALLFYAADP QNLLGFSTEE  60
   61 TSLKLKKSLS KTLPIFYPLA GRIIGSFVEC NDEGAVFIEA RVDHLLSEFL KCPVPESLEL 120
  121 LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG 180
  181 ITLIPSFTAS EVFPKPLDEL PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV 240
  241 KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL 300
  301 KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS 360
  361 NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD GEGIEAWITL TEEQMSLFEC 420
  421 DQELLESASL NPPVLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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