| Protein: | PKP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 394 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PKP1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-85 | [21..391] | [208..596] |
|
|
4.0E-85 | [21..391] | [208..596] |
|
|
5.0E-85 | [21..391] | [208..595] |
|
|
7.0E-85 | [21..391] | [208..596] |
|
|
2.0E-84 | [21..391] | [208..596] |
|
|
5.0E-84 | [21..391] | [207..594] |
|
|
6.0E-84 | [21..391] | [37..425] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MWKIMRSWKC GGMRWAHRQR PSHELLSQLS FDQHYKIRSN IELLIQDYAS KPIAPLNYEY 60
61 FLQYRPPLTK KEEYMLTIKT INLLLSLTCK RLNAIQRLPY NAVINPHIER TNSLYLKSLQ 120
121 TLLSIAYPYE LHNPPKIQAK FTELLDDHED AIVVLAKGLQ EIQSCYPKFQ ISQFLNFHLK 180
181 ERITMKLLVT HYLSLMAQNK GDTNKRMIGI
|
| Detection Method: |  |
| Confidence: | 321.218487 |
| Match: | 1gkxA_ |
| Description: | Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [211-394] |
1 11 21 31 41 51
| | | | | |
1 LHRDLPIAQL IKHVSDYVND ICFVKFNTQR TPVLIHPPSQ DITFTCIPPI LEYIMTEVFK 60
61 NAFEAQIALG KEHMPIEINL LKPDDDELYL RIRDHGGGIT PEVEALMFNY SYSTHTQQSA 120
121 DSESTDLPGE QINNVSGMGF GLPMCKTYLE LFGGKIDVQS LLGWGTDVYI KLKGPSKTAL 180
181 LSKK
|
| Detection Method: | |
| Confidence: | 321.218487 |
| Match: | 1gkxA_ |
| Description: | Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) |
| Matching Structure (courtesy of the PDB): |
|
