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View Structure Prediction Details

Protein: SGF73
Organism: Saccharomyces cerevisiae
Length: 657 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGF73.

Description E-value Query
Range
Subject
Range
SGF73 - Subunit of SAGA histone acetyltransferase complex; involved in formation of the preinitiation comple...
SGF73_YEAST - SAGA-associated factor 73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGF73 PE=1 SV=...
0.0 [1..657] [1..657]
SGF73_SCHPO - SAGA-associated factor 73 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgf73 PE=3 SV=1
SPCC126.04c - SAGA complex subunit Sgf73
4.0E-90 [68..398] [74..318]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-58 [173..329] [283..437]
gi|187252509 - gi|187252509|gb|AAI66666.1| Ataxin 7 [synthetic construct]
ATXN7 - ataxin 7
5.0E-58 [173..329] [283..437]
ATX7_MOUSE - Ataxin-7 OS=Mus musculus GN=Atxn7 PE=1 SV=1
5.0E-49 [173..317] [269..410]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGDAEIKG IKPKVIEEYS LSQGSGPSND SWKSLMSSAK DTPLQYDHMN RESLKKYFNP  60
   61 NAQLIEDPLD KPIQYRVCEK CGKPLALTAI VDHLENHCAG ASGKSSTDPR 

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 10.1
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #2
Region A:
Residues: [111-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESTRETIRN GVESTGRNNN DDDNSNDNNN DDDDDDDNDD NEDDDDADDD DDNSNGANYK  60
   61 KNDSSFNPLK RSTSMESAN

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 10.1
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #3
Region A:
Residues: [190-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPNMDTKRSK TGTPQTFSSS IKKQKKVKQR NPTEKHLIDF NKQCGVELPE GGYCARSLTC  60
   61 KSHSMGAKR

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 10.1
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #4
Region A:
Residues: [259-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVSGRSKPYD VLLADYHREH QTKIGAAAEK RAKQQELQKL QKQIQKEQKK HTQQQKQGQR  60
   61 SKQRNVNGGK SAKN

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 10.1
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #5
Region A:
Residues: [333-657]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGKSTVHNGN NINEIGHVNL TPEEETTQVL NGVSRSFPLP LESTVLSSVR YRTKYFRMRE  60
   61 MFASSFSVKP GYTSPGYGAI HSRVGCLDLD RTTDYKFRVR TPQPINHLTN QNLNPKQIQR 120
  121 LQQQRALQAQ LLSQQQQQQQ QQQQHHSPQA QAQASTQQPT QGMVPNHFPG GATNSSFNAN 180
  181 VSSKQIQQQQ QQQQHKSQDT GLTPLEIQSQ QQKLRQQQLQ QQKFEAAASY LANATKLMQE 240
  241 SNQDSHLSGT HNNNSSKNGN NNLMTMKASI SSPNTSVNSI QSPPSVNSVN GSGQGVSTGI 300
  301 NVSGNNGRIE VGIGNSVNPY NGRIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle