YRC Public Data Repository - Protein Structure Prediction

Protein:	ETCG_PHOLL
Organism:	Photorhabdus luminescens subsp. laumondii TTO1
Length:	209 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETCG_PHOLL.

Description	E-value	Query Range	Subject Range
Q66AG8\|Q66AG8_YERPS - Putative exported protein precursor - Yersinia pseudotuberculosis gi\|149292253, gi... - gi\|149365840\|ref\|ZP_01887875.1\| putative exported protein [Yersinia pestis CA88-4125], gi\|149292253\|... ETCG_YERPE - Electron transport complex subunit G OS=Yersinia pestis GN=YPO2241 PE=3 SV=1 gi\|145598191, gi... - gi\|145598191\|ref\|YP_001162267.1\| electron transport complex protein RnfG [Yersinia pestis Pestoides ... gi\|229694006, gi... - gi\|229897669\|ref\|ZP_04512825.1\| electron transport complex protein [Yersinia pestis biovar Orientali... gi\|229688604, gi... - gi\|229898314\|ref\|ZP_04513461.1\| electron transport complex protein [Yersinia pestis biovar Orientali... gi\|108807595, gi... - gi\|108807595\|ref\|YP_651511.1\| electron transport complex protein RnfG [Yersinia pestis Antiqua], gi\|... gi\|229902173, gi... - gi\|229902173\|ref\|ZP_04517294.1\| electron transport complex protein [Yersinia pestis Nepal516], gi\|22... gi\|21958915, gi\|... - gi\|22125972\|ref\|NP_669395.1\| electron transport complex protein RnfG [Yersinia pestis KIM], gi\|21958... gi\|51589770, gi\|... - gi\|51596488\|ref\|YP_070679.1\| electron transport complex protein RnfG [Yersinia pseudotuberculosis IP... gi\|45441839, gi\|... - gi\|45441839\|ref\|NP_993378.1\| electron transport complex protein RnfG [Yersinia pestis biovar Microtu... gi\|15980241, gi\|... - gi\|218929337\|ref\|YP_002347212.1\| electron transport complex protein RnfG [Yersinia pestis CO92], gi\|... gi\|170024246, gi... - gi\|170024246\|ref\|YP_001720751.1\| electron transport complex protein RnfG [Yersinia pseudotuberculosi... gi\|186895538, gi... - gi\|186895538\|ref\|YP_001872650.1\| electron transport complex protein RnfG [Yersinia pseudotuberculosi... gi\|166210872, gi... - gi\|166210872\|ref\|ZP_02236907.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|167049722, gi... - gi\|167400869\|ref\|ZP_02306375.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|167420102, gi... - gi\|167420102\|ref\|ZP_02311855.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|167424897, gi... - gi\|167424897\|ref\|ZP_02316650.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|162419734, gi... - gi\|162419734\|ref\|YP_001606694.1\| electron transport complex protein RnfG [Yersinia pestis Angola], g... gi\|165927414, gi... - gi\|165927414\|ref\|ZP_02223246.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|229894926, gi... - gi\|229894926\|ref\|ZP_04510104.1\| electron transport complex protein [Yersinia pestis Pestoides A], gi... gi\|165913931, gi... - gi\|165938270\|ref\|ZP_02226829.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest... gi\|166010778, gi... - gi\|166010778\|ref\|ZP_02231676.1\| electron transport complex, RnfABCDGE type, G subunit [Yersinia pest...	236.0	[0..1]	[207..1]

Back

Predicted Domain #1

Region A:
Residues: [1-67]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLETMRRHGI TLAIFAALTT GLTAVVNSLT KSTIAEQAAL QHKSLLDQVI PPALYDNDIQ  60
   61 NECYLVN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [68-209]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANALGNNLPH RLYLARKNGH PVAAALESTA PDGYSGAIQL LVGADFSGKV LGVRVTEHHE  60
   61 TPGLGDKIET RISNWINVFS GKTITSNHDQ HWAVKKDGGE FDQFTGATIT PRAVVNSVKR 120
  121 TALYLQTIPE HLSSLESCGE KS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	25.200659
Match:	PF04205.5
Description:	No description for PF04205.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits