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View Structure Prediction Details

Protein: KNAT6_ARATH
Organism: Arabidopsis thaliana
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KNAT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|9295701, gi|1... - gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana], gi|15991300|dbj|BAB69678.1| h...
250.0 [0..4] [327..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS  60
   61 ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ AYIDCQKVGA PPEIACLLEE 120
  121 IQRESDVYKQ E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVPSSCFGAD PELDEFMETY CDILVKYKSD LARPFDEATC FLNKIEMQLR NLCTGVESAR  60
   61 GVSEDGVISS DEELSGGDHE VAEDGRQRCE DRDLKDRLLR KFGSRISTLK LEFSKKKKKG 120
  121 KLPREARQAL LDWWNLHYKW PYPTEGDKIA LADATGLDQK QINNWFINQR KRHWKPSENM 180
  181 PFAMMDDSSG SFFTEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 2h8rA
Description: No description for 2h8rA was found.

YRC Informatics Platform - Version 3.0
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