D parc

DTASelect v1.9
/data/1/aobailey/Antczak/cac1_02092005/parc
/scratch/yates/yrcdb/yeastorf5.fasta
SEQUEST 2.7 in SQT format.

Jump to the summary table.

sequest.params modifications:

*	X	0.0
#	X	0.0
@	X	0.0
Static	C	57.0

true	Use criteria
1.8	Minimum +1 XCorr
2.5	Minimum +2 XCorr
3.5	Minimum +3 XCorr
0.08	Minimum DeltCN
1	Minimum charge state
3	Maximum charge state
0.0	Minimum ion proportion
1000	Maximum Sp rank
-1.0	Minimum Sp score
Include	Modified peptide inclusion
Any	Tryptic status requirement
true	Multiple, ambiguous IDs allowed
Ignore	Peptide validation handling
XCorr	Purge duplicate peptides by protein
false	Include only loci with unique peptide
false	Remove subset proteins
Ignore	Locus validation handling
0	Minimum modified peptides per locus
10	Minimum redundancy for low coverage loci
2	Minimum peptides per locus

Locus Key:

Validation Status

Locus

Sequence Count

Spectrum Count

Sequence Coverage

Length

MolWt

Descriptive Name

Similarity Key:

Locus

# of identical peptides

# of differing peptides

ORFP:YBR195C

79.6%

422

47365

5.6

MSI1 SGDID:S0000399, Chr II from 611837-610569, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01730.01730.2	4.7219	0.4121	1824.35	1824.985	1	1113.4	73.3%	2	K.DITHEASSIPIDLQER.Y	2
*	PARC_cac1_02092005-02.01708.01708.2	3.5626	0.2903	1445.11	1445.612	1	1488.6	77.3%	1	K.LLYDYLNTNSTK.W	2
*	PARC_cac1_02092005-02.03142.03142.2	4.0454	0.525	2452.29	2453.593	1	594.3	47.4%	3	K.WPSLTCQFFPDLDTTSDEHR.I	2
*	PARC_cac1_02092005-02.03162.03162.3	5.5889	0.4994	2452.88	2453.593	1	2947.2	52.6%	2	K.WPSLTCQFFPDLDTTSDEHR.I	3
*	PARC_cac1_02092005-03.02218.02218.2	4.5122	0.3729	2387.69	2387.689	1	1107.9	47.5%	5	R.ILLSSFTSSQKPEDETIYISK.I	2
*	PARC_cac1_02092005-04.02235.02235.3	3.9824	0.3552	2390.39	2387.689	1	716.5	33.8%	3	R.ILLSSFTSSQKPEDETIYISK.I	3
*	PARC_cac1_02092005-02.02375.02375.2	4.3948	0.387	2578.05	2578.787	1	1411.8	55.0%	3	K.WSSLNNFDMDEMEFKPENSTR.F	2
*	PARC_cac1_02092005-02.02380.02380.3	3.9581	0.2623	2580.26	2578.787	1	660.8	33.8%	2	K.WSSLNNFDMDEMEFKPENSTR.F	3
*	PARC_cac1_02092005-02.01916.01916.2	3.4108	0.2285	2305.09	2305.496	8	252.8	33.3%	1	S.SLNNFDMDEMEFKPENSTR.F	2
*	PARC_cac1_02092005-03.02820.02820.2	5.8859	0.4932	2034.77	2033.217	1	2454.7	81.2%	7	K.HLVNDISIFFPNGECNR.A	2
*	PARC_cac1_02092005-04.03187.03187.2	4.5703	0.3888	2495.97	2497.767	1	1069.5	63.6%	29	R.YLPQNPDIIAGASSDGAIYIFDR.T	2
*	PARC_cac1_02092005-03.01199.01199.1	1.8621	0.1294	958.48	959.09	2	370.6	64.3%	1	K.ISHPFETK.L	1
*	PARC_cac1_02092005-07.03938.03938.3	4.2922	0.4281	4399.4	4400.818	1	1120.0	21.2%	1	K.LFGSHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSH.S	3
*	PARC_cac1_02092005-03.03351.03351.3	4.4687	0.2988	2866.43	2866.206	1	1059.7	33.3%	2	L.AWNLQQEALLLSSHSNGQVQVWDIK.Q	3
*	PARC_cac1_02092005-04.02138.02138.2	2.7227	0.1691	1927.41	1925.195	8	391.8	37.5%	1	A.LLLSSHSNGQVQVWDIK.Q	2
*	PARC_cac1_02092005-02.03102.03102.2	3.761	0.3705	1952.53	1953.202	19	387.8	40.6%	1	K.QYSHENPIIDLPLVSIN.S	2
*	PARC_cac1_02092005-04.03459.03459.3	4.7903	0.423	3665.36	3665.977	1	699.7	22.7%	1	N.SDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLR.T	3
*	PARC_cac1_02092005-02.01967.01967.1	2.0252	0.0855	1287.79	1288.444	28	152.4	40.9%	1	C.TEGNAVSLLDLR.T	1
*	PARC_cac1_02092005-02.01311.01311.1	2.0495	0.165	1317.46	1318.429	1	132.8	50.0%	1	K.NSLILASADSNGR.L	1
*	PARC_cac1_02092005-05.03806.03806.3	6.6855	0.5188	3789.56	3791.178	1	1975.0	28.6%	13	K.SPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVK.L	3
*	PARC_cac1_02092005-02.03190.03190.2	4.2793	0.5652	2277.15	2278.48	1	1185.8	52.5%	2	L.EWSPNFDTVLATAGQEDGLVK.L	2
*	PARC_cac1_02092005-04.02263.02263.2	2.7461	0.1934	1640.03	1639.725	1	753.4	58.3%	1	K.LWDTSCEETIFTH.G	2
*	PARC_cac1_02092005-03.03086.03086.2	4.0597	0.4577	2294.11	2291.506	1	655.0	47.4%	1	K.LWDTSCEETIFTHGGHMLGV.N	2
*	PARC_cac1_02092005-07.02707.02707.3	4.89	0.3541	2892.14	2891.243	1	1146.0	30.0%	1	D.PWLMCSVANDNSVHIWKPAGNLVGHS.-	3
*	PARC_cac1_02092005-05.02062.02062.2	3.6922	0.5039	2200.63	2203.422	1	500.4	35.0%	1	C.SVANDNSVHIWKPAGNLVGHS.-	2
*	PARC_cac1_02092005-05.02038.02038.2	5.2466	0.5283	2115.73	2116.344	1	1574.7	60.5%	1	S.VANDNSVHIWKPAGNLVGHS.-	2
*	PARC_cac1_02092005-05.02046.02046.3	3.9461	0.3285	2117.0	2116.344	1	1377.2	42.1%	1	S.VANDNSVHIWKPAGNLVGHS.-	3
*	PARC_cac1_02092005-05.02034.02034.2	3.8491	0.3278	2016.19	2017.211	1	1032.2	55.6%	1	V.ANDNSVHIWKPAGNLVGHS.-	2
*	PARC_cac1_02092005-05.02018.02018.2	4.3821	0.3849	1945.49	1946.133	1	1088.1	58.8%	1	A.NDNSVHIWKPAGNLVGHS.-	2

ORFP:YML102W

65.4%

468

51252

6.3

CAC2 SGDID:S0004570, Chr XIII from 68294-69700

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.02472.02472.2	2.6928	0.3212	1885.97	1887.105	1	710.7	53.6%	1	S.HLQIYWHDSQPVYSL.T	2 3
*	PARC_cac1_02092005-05.02772.02772.2	5.3484	0.5426	2389.77	2391.691	1	1957.8	63.9%	1	S.HLQIYWHDSQPVYSLTFQK.N	2
*	PARC_cac1_02092005-04.02294.02294.2	4.8495	0.5562	2140.43	2141.39	1	1041.2	59.4%	1	L.QIYWHDSQPVYSLTFQK.N	2
*	PARC_cac1_02092005-03.03126.03126.2	2.7863	0.2583	1901.79	1900.1	2	253.5	39.3%	2	I.YWHDSQPVYSLTFQK.N	2
*	PARC_cac1_02092005-02.01572.01572.1	2.5499	0.2307	1231.44	1232.338	1	564.0	72.2%	1	Y.WHDSQPVYSL.T	1
*	PARC_cac1_02092005-03.01802.01802.2	5.3083	0.4888	1737.09	1736.924	1	1269.3	80.8%	2	Y.WHDSQPVYSLTFQK.N	2
*	PARC_cac1_02092005-02.01127.01127.1	2.1268	0.1033	922.51	923.013	1	949.4	87.5%	1	K.LFTAGGDNK.V	1
*	PARC_cac1_02092005-02.03090.03090.1	2.6422	0.2561	1222.64	1222.424	1	744.7	65.0%	1	R.KIESLDFLGSL.T	1
*	PARC_cac1_02092005-02.02971.02971.1	1.9171	0.1491	1322.29	1323.529	30	183.7	45.5%	1	R.KIESLDFLGSLT.H	1
*	PARC_cac1_02092005-05.03130.03130.3	5.884	0.4877	2521.28	2521.879	1	2772.5	46.4%	2	R.KIESLDFLGSLTHHEQAINVIR.F	3
*	PARC_cac1_02092005-05.03134.03134.2	5.9843	0.4743	2521.49	2521.879	1	1734.7	57.1%	3	R.KIESLDFLGSLTHHEQAINVIR.F	2
*	PARC_cac1_02092005-05.01647.01647.1	2.9647	0.2096	1317.65	1318.478	1	587.7	65.0%	1	L.THHEQAINVIR.F	1
*	PARC_cac1_02092005-02.02003.02003.2	5.3086	0.4808	2074.01	2074.298	1	2533.3	68.4%	1	F.NSKGDVLASAGDDGQVLLWK.Q	2
*	PARC_cac1_02092005-02.01399.01399.3	4.5281	0.4263	3409.28	3410.561	1	535.6	23.3%	1	K.QEDPNTQQESVVRPFGMDAETSEADENKEK.W	3
*	PARC_cac1_02092005-02.00755.00755.2	3.5098	0.4047	1655.41	1654.7	1	1111.9	60.7%	1	F.GMDAETSEADENKEK.W	2
*	PARC_cac1_02092005-03.02752.02752.2	3.7589	0.3299	2391.59	2392.59	1	415.3	40.9%	1	R.LRGGSGATAAAEIYDLAWSPDNR.N	2
*	PARC_cac1_02092005-02.02778.02778.2	5.029	0.4434	2122.93	2123.243	1	2115.9	57.5%	6	R.GGSGATAAAEIYDLAWSPDNR.N	2
*	PARC_cac1_02092005-02.01518.01518.1	2.1936	0.3744	1391.57	1392.579	3	157.0	54.5%	1	R.NIVVACMDNSIR.L	1
*	PARC_cac1_02092005-02.01519.01519.2	4.0643	0.3919	1393.79	1392.579	1	1729.5	81.8%	1	R.NIVVACMDNSIR.L	2
*	PARC_cac1_02092005-04.03139.03139.3	4.8679	0.3386	3287.45	3287.498	1	1216.2	29.5%	1	V.CGQSDHGHYVQGVAWDPLNQFILSQSADR.S	3
*	PARC_cac1_02092005-04.03176.03176.3	5.3069	0.4829	2940.62	2942.177	1	1260.3	30.0%	1	Q.SDHGHYVQGVAWDPLNQFILSQSADR.S	3
*	PARC_cac1_02092005-02.03240.03240.2	4.1286	0.5439	1860.95	1862.052	1	1039.0	60.0%	1	V.AWDPLNQFILSQSADR.S	2
*	PARC_cac1_02092005-03.02514.02514.1	2.1641	0.2894	1001.24	1001.214	36	258.7	56.2%	1	R.SLHVYGVIL.S	1
*	PARC_cac1_02092005-05.03363.03363.2	6.3481	0.5675	1900.45	1901.257	1	3626.3	80.6%	10	R.SLHVYGVILSSAGVVTGLK.L	2
*	PARC_cac1_02092005-04.02894.02894.2	4.59	0.4929	1886.53	1887.105	1	1051.6	64.3%	3	R.TNYLFHNETLPSFFR.R	2
*	PARC_cac1_02092005-05.03099.03099.2	4.2003	0.479	1671.39	1671.896	1	1662.4	83.3%	1	N.YLFHNETLPSFFR.R	2
*	PARC_cac1_02092005-05.02792.02792.1	2.7257	0.297	1508.24	1508.72	1	295.8	54.5%	1	Y.LFHNETLPSFFR.R	1
*	PARC_cac1_02092005-05.02390.02390.2	4.2056	0.416	2049.55	2050.338	1	697.4	58.3%	1	R.RCSISPCGGLVVIPSGVYK.V	2
*	PARC_cac1_02092005-03.02306.02306.2	4.4224	0.218	1893.09	1894.151	1	1247.5	64.7%	1	R.CSISPCGGLVVIPSGVYK.V	2
*	PARC_cac1_02092005-03.02276.02276.2	4.0732	0.4623	1734.09	1734.012	1	829.0	59.4%	1	C.SISPCGGLVVIPSGVYK.V	2
*	PARC_cac1_02092005-02.01767.01767.1	2.5782	0.2244	1189.98	1189.44	12	422.4	59.1%	1	C.GGLVVIPSGVYK.V	1
*	PARC_cac1_02092005-02.01623.01623.2	4.1631	0.4454	1718.01	1716.854	1	1120.8	64.3%	1	K.VAGDEVANCVYVYTR.S	2
*	PARC_cac1_02092005-02.01202.01202.1	1.8493	0.2287	1002.52	1003.144	5	370.7	55.0%	2	R.SGILNSAGGVK.N	1
*	PARC_cac1_02092005-05.03046.03046.2	5.7455	0.5227	2090.17	2089.423	1	1962.4	67.6%	2	K.KPALMAAFSPVFYETCQK.S	2
*	PARC_cac1_02092005-02.01251.01251.1	2.5642	0.3304	1258.34	1259.367	1	480.3	61.1%	1	F.SPVFYETCQK.S	1
*	PARC_cac1_02092005-02.01302.01302.1	2.2283	0.3306	1339.55	1340.433	1	274.9	54.5%	1	Y.VSIDTETQFGSR.I	1
*	PARC_cac1_02092005-02.01400.01400.2	3.8606	0.4416	2192.35	2193.433	1	551.7	57.5%	1	R.IEPPAMHAEPLDTDESAVAAK.N	2
*	PARC_cac1_02092005-02.01430.01430.2	4.0088	0.4004	1951.37	1951.158	1	948.6	52.8%	1	E.PPAMHAEPLDTDESAVAAK.N	2
*	PARC_cac1_02092005-02.01942.01942.1	2.4831	0.2483	1227.71	1228.493	3	301.5	59.1%	2	R.EAGGIVNMLPVK.K	1

KERATIN02

59.8%

622

61987

5.2

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.00842.00842.1	2.4269	0.2278	1232.49	1233.283	486	80.7	30.0%	3	T.SGGGGGGGLGSGGSIR.S	1
*	PARC_cac1_02092005-03.00840.00840.2	3.8409	0.4127	1234.39	1233.283	1	1376.3	73.3%	1	T.SGGGGGGGLGSGGSIR.S	2
*	PARC_cac1_02092005-04.01627.01627.2	3.453	0.3238	1929.87	1929.957	1	513.0	40.5%	1	G.RGGGGSFGYSYGGGSGGGFSAS.S	2
*	PARC_cac1_02092005-03.02284.02284.2	5.477	0.5792	2705.89	2706.761	1	1522.1	45.2%	4	R.GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR.G	2
*	PARC_cac1_02092005-03.02255.02255.3	5.2149	0.5036	2706.86	2706.761	1	1136.9	29.8%	1	R.GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR.G	3
*	PARC_cac1_02092005-03.01752.01752.2	3.6585	0.5578	2022.89	2024.07	1	813.7	43.5%	1	Y.SYGGGSGGGFSASSLGGGFGGGSR.G	2
*	PARC_cac1_02092005-03.01642.01642.2	4.9335	0.5943	1773.25	1773.816	1	1347.1	54.8%	1	Y.GGGSGGGFSASSLGGGFGGGSR.G	2
*	PARC_cac1_02092005-02.01102.01102.1	2.1772	0.1655	1065.59	1066.174	27	196.5	62.5%	1	K.STMQELNSR.L	1
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
*	PARC_cac1_02092005-02.02575.02575.2	5.1135	0.3955	2539.69	2536.714	1	1931.5	57.5%	2	K.VQALEEANNDLENKIQDWYDK.K	2
*	PARC_cac1_02092005-04.03520.03520.3	4.0694	0.2587	2904.41	2904.16	1	564.8	32.3%	1	K.NYSPYYNTIDDLKDQIVDLTVGNNK.T	3
*	PARC_cac1_02092005-02.03550.03550.2	3.0301	0.3346	2538.67	2539.802	1	195.6	33.3%	1	S.PYYNTIDDLKDQIVDLTVGNNK.T	2
*	PARC_cac1_02092005-02.01424.01424.1	2.7311	0.3732	1315.43	1316.454	1	544.1	63.6%	1	K.DQIVDLTVGNNK.T	1
*	PARC_cac1_02092005-02.01451.01451.1	2.4634	0.2517	1062.49	1061.18	37	236.4	56.2%	2	K.TLLDIDNTR.M	1
*	PARC_cac1_02092005-03.01566.01566.1	2.6229	0.085	1307.66	1308.538	4	393.8	61.1%	2	R.IKFEMEQNLR.Q	1
*	PARC_cac1_02092005-02.03219.03219.2	4.7981	0.4391	2302.13	2300.644	1	1898.3	66.7%	1	K.SDLEMQYETLQEELMALKK.N	2
*	PARC_cac1_02092005-02.02206.02206.2	3.5013	0.2394	1852.65	1853.1	1	1504.7	71.4%	2	K.TLNDMRQEYEQLIAK.N	2
*	PARC_cac1_02092005-03.03142.03142.3	6.445	0.5032	3266.93	3266.413	1	1856.0	33.9%	6	K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E	3
*	PARC_cac1_02092005-03.02774.02774.3	4.6774	0.3815	3151.64	3151.325	1	1297.0	30.6%	1	D.IENQYETQITQIEHEVSSSGQEVQSSAK.E	3
*	PARC_cac1_02092005-03.03144.03144.2	3.2599	0.2498	2668.75	2666.815	1	873.7	41.3%	1	Q.YETQITQIEHEVSSSGQEVQSSAK.E	2
*	PARC_cac1_02092005-02.03290.03290.1	2.1121	0.1736	1108.94	1108.15	2	322.5	55.0%	1	S.SSGQEVQSSAK.E	1
*	PARC_cac1_02092005-03.02536.02536.2	6.7272	0.5085	1838.31	1839.056	1	2955.0	76.7%	4	R.HGVQELEIELQSQLSK.K	2
*	PARC_cac1_02092005-02.02382.02382.3	4.8554	0.3298	1840.07	1839.056	1	1997.8	48.3%	1	R.HGVQELEIELQSQLSK.K	3
*	PARC_cac1_02092005-03.02387.02387.3	5.8411	0.42	1967.9	1967.23	1	2046.9	53.1%	1	R.HGVQELEIELQSQLSKK.A	3
*	PARC_cac1_02092005-03.02400.02400.2	6.0982	0.3829	1968.65	1967.23	1	2375.4	68.8%	2	R.HGVQELEIELQSQLSKK.A	2
*	PARC_cac1_02092005-03.02703.02703.2	5.095	0.4626	2096.59	2096.308	1	1759.0	65.6%	2	R.QEIECQNQEYSLLLSIK.M	2
*	PARC_cac1_02092005-04.02004.02004.2	5.5586	0.4502	2510.93	2511.618	1	1678.2	54.5%	5	K.EIETYHNLLEGGQEDFESSGAGK.I	2
*	PARC_cac1_02092005-02.01018.01018.2	5.2711	0.3131	1792.09	1792.732	1	1408.7	54.5%	2	R.GGSGGSYGGGGSGGGYGGGSGSR.G	2
*	PARC_cac1_02092005-05.00863.00863.3	7.8866	0.3071	4409.12	4410.166	1	2214.4	21.6%	2	Y.GGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00860.00860.3	4.945	0.3743	4352.72	4353.114	1	687.1	15.4%	1	G.GGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00847.00847.3	3.9764	0.4015	4237.76	4239.01	1	1090.5	18.2%	1	G.SGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00879.00879.3	6.5346	0.3999	3415.28	3415.236	1	1859.4	24.4%	1	Y.GGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00876.00876.3	5.833	0.4328	3357.86	3358.184	1	1360.7	24.4%	1	G.GGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00895.00895.3	5.2885	0.1146	3300.8	3301.132	1	869.1	20.8%	1	G.GSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00856.00856.3	5.5761	0.5095	2988.2	2985.847	1	1184.6	24.3%	1	G.HSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	3
*	PARC_cac1_02092005-05.00866.00866.2	2.762	0.1748	2502.41	2503.393	7	224.1	21.0%	1	G.GGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR.G	2
*	PARC_cac1_02092005-03.01191.01191.3	7.1347	0.5751	3225.89	3225.112	1	1704.1	28.2%	3	R.GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK.S	3

Similarities: KERATIN03(1:36)
KERATIN05(1:36)
KERATIN12(1:36)
KERATIN08(1:36)
KERATIN07(1:36)
KERATIN06(1:36)

ORFP:YGR192C

55.4%

332

35747

7.0

TDH3 SGDID:S0003424, Chr VII from 883812-882814, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.01783.01783.1	2.0748	0.1299	1196.62	1197.42	12	347.0	50.0%	1	R.IALSRPNVEVV.A	1
*	PARC_cac1_02092005-03.02242.02242.1	2.5409	0.3313	1380.56	1381.658	1	551.0	54.2%	1	R.IALSRPNVEVVAL.N	1
*	PARC_cac1_02092005-07.02018.02018.2	3.564	0.3766	1610.85	1610.851	2	692.7	57.1%	1	R.IALSRPNVEVVALND.P	2
*	PARC_cac1_02092005-03.03547.03547.3	6.5094	0.4089	3174.74	3173.654	1	1942.8	37.0%	1	R.IALSRPNVEVVALNDPFITNDYAAYMFK.Y	3
*	PARC_cac1_02092005-04.03406.03406.3	4.7886	0.3919	2988.86	2989.416	1	1324.5	35.0%	1	A.LSRPNVEVVALNDPFITNDYAAYMFK.Y	3
*	PARC_cac1_02092005-04.03406.03406.2	2.5026	0.1503	1992.91	1995.257	1	523.8	43.8%	1	V.ALNDPFITNDYAAYMFK.Y	3
*	PARC_cac1_02092005-03.03022.03022.3	5.3171	0.3465	3395.15	3394.765	1	1812.3	31.7%	3	K.KIATYQERDPANLPWGSSNVDIAIDSTGVFK.E	3
*	PARC_cac1_02092005-04.03140.03140.3	3.9112	0.307	3264.59	3266.591	1	947.1	26.7%	1	K.IATYQERDPANLPWGSSNVDIAIDSTGVFK.E	3
*	PARC_cac1_02092005-03.03068.03068.3	4.3407	0.2973	2818.31	2818.072	1	1018.5	31.0%	1	Y.QERDPANLPWGSSNVDIAIDSTGVFK.E	3
*	PARC_cac1_02092005-05.03630.03630.2	5.3019	0.5171	2404.85	2404.638	1	1302.7	59.1%	2	R.DPANLPWGSSNVDIAIDSTGVFK.E	2
*	PARC_cac1_02092005-07.03067.03067.2	2.7655	0.2812	2290.73	2289.55	1	346.2	31.0%	1	D.PANLPWGSSNVDIAIDSTGVFK.E	2
	PARC_cac1_02092005-03.02635.02635.2	3.2285	0.3544	1680.95	1680.074	1	1312.0	66.7%	1	K.KVVITAPSSTAPMFVM.G	2 2
	PARC_cac1_02092005-03.02251.02251.2	5.4867	0.5657	2335.27	2336.767	1	815.7	52.4%	1	K.KVVITAPSSTAPMFVMGVNEEK.Y	2 2
	PARC_cac1_02092005-03.02248.02248.3	3.736	0.3573	2337.05	2336.767	1	986.1	31.0%	1	K.KVVITAPSSTAPMFVMGVNEEK.Y	3 3
	PARC_cac1_02092005-03.02547.02547.2	2.8477	0.3053	2210.69	2208.593	1	286.6	32.5%	1	K.VVITAPSSTAPMFVMGVNEEK.Y	2 2
*	PARC_cac1_02092005-02.03696.03696.2	5.2709	0.4753	2049.27	2047.331	1	1811.6	63.9%	1	K.VINDAFGIEEGLMTTVHSL.T	2
*	PARC_cac1_02092005-04.01047.01047.1	2.6424	0.4355	984.48	985.128	1	576.6	75.0%	1	T.VHSLTATQK.T	1
	PARC_cac1_02092005-02.01166.01166.1	3.0003	0.4348	1375.58	1375.522	1	503.5	57.1%	1	R.TASGNIIPSSTGAAK.A	1 1 1
	PARC_cac1_02092005-02.01172.01172.2	2.6138	0.1456	1375.65	1375.522	14	276.6	46.4%	1	R.TASGNIIPSSTGAAK.A	2 2 2
	PARC_cac1_02092005-04.02155.02155.2	4.3871	0.4417	1627.87	1627.922	1	1386.6	75.0%	2	F.RVPTVDVSVVDLTVK.L	2 2 2
	PARC_cac1_02092005-05.02643.02643.1	2.7918	0.2636	1470.85	1471.734	1	521.7	53.8%	3	R.VPTVDVSVVDLTVK.L	1 1 1
	PARC_cac1_02092005-07.02346.02346.2	4.2959	0.4552	1471.85	1471.734	1	1707.8	80.8%	5	R.VPTVDVSVVDLTVK.L	2 2 2
*	PARC_cac1_02092005-07.03396.03396.3	5.024	0.4464	3573.2	3571.876	1	1105.3	27.9%	3	K.GVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPK.F	3
*	PARC_cac1_02092005-07.03396.03396.2	3.2356	0.3527	2382.47	2380.573	1	425.1	43.2%	1	S.SDFLGDSHSSIFDASAGIQLSPK.F	3
	PARC_cac1_02092005-02.01771.01771.2	3.9549	0.4552	1753.39	1753.865	1	852.7	61.5%	4	K.LVSWYDNEYGYSTR.V	2 2

Similarities: ORFP:YJR009C(10:15)
ORFP:YJL052W(5:20)

U	ORFP:YBR118W	29	62	46.5%	458	50033	9.0	TEF2 SGDID:S0000322, Chr II from 477626-479002
U	ORFP:YPR080W	29	62	46.5%	458	50033	9.0	TEF1 SGDID:S0006284, Chr XVI from 700590-701966

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-05.02023.02023.2	5.1323	0.5065	1561.29	1561.781	1	2492.9	82.1%	8	K.SHINVVVIGHVDSGK.S	2
PARC_cac1_02092005-05.02079.02079.1	4.4996	0.4961	1561.73	1561.781	1	961.8	60.7%	7	K.SHINVVVIGHVDSGK.S	1
PARC_cac1_02092005-03.01252.01252.1	2.5496	0.2079	1109.43	1110.299	1	728.5	65.0%	1	N.VVVIGHVDSGK.S	1
PARC_cac1_02092005-02.01619.01619.1	2.3414	0.1445	895.32	895.046	64	789.0	75.0%	1	K.YAWVLDK.L	1
PARC_cac1_02092005-03.01366.01366.1	2.2094	0.3873	1355.54	1356.524	1	377.8	59.1%	1	K.YQVTVIDAPGHR.D	1
PARC_cac1_02092005-04.01754.01754.2	4.3942	0.3989	1860.89	1860.123	1	737.4	60.0%	3	K.YQVTVIDAPGHRDFIK.N	2
PARC_cac1_02092005-05.02822.02822.1	3.0761	0.3209	1327.61	1327.569	1	369.5	63.6%	3	R.EHALLAFTLGVR.Q	1
PARC_cac1_02092005-04.02506.02506.2	3.7407	0.3508	1327.87	1327.569	1	1490.4	81.8%	3	R.EHALLAFTLGVR.Q	2
PARC_cac1_02092005-02.01234.01234.1	2.0991	0.2464	884.5	885.095	1	194.3	78.6%	2	R.QLIVAVNK.M	1
PARC_cac1_02092005-02.02690.02690.2	3.445	0.2701	2157.07	2156.334	1	874.7	50.0%	1	I.SGWNGDNMIEATTNAPWYK.G	2
PARC_cac1_02092005-03.02634.02634.2	4.9055	0.4867	1996.99	1998.241	1	1265.6	61.8%	2	K.TLLEAIDAIEQPSRPTDK.P	2
PARC_cac1_02092005-03.02510.02510.1	2.6392	0.3785	1213.68	1214.45	1	452.7	77.8%	1	K.PLRLPLQDVY.K	1
PARC_cac1_02092005-05.02374.02374.1	1.9286	0.19	1341.95	1342.624	9	210.3	55.0%	1	K.PLRLPLQDVYK.I	1
PARC_cac1_02092005-05.02386.02386.2	3.0712	0.3556	1343.09	1342.624	1	997.8	80.0%	1	K.PLRLPLQDVYK.I	2
PARC_cac1_02092005-05.01744.01744.1	2.5162	0.3523	1154.5	1154.398	1	434.4	68.2%	1	Y.KIGGIGTVPVGR.V	1
PARC_cac1_02092005-03.02432.02432.2	4.6661	0.4735	2431.03	2431.893	1	385.7	41.3%	3	R.VETGVIKPGMVVTFAPAGVTTEVK.S	2
PARC_cac1_02092005-04.01891.01891.2	4.3635	0.5524	1834.25	1833.196	1	1196.1	58.8%	1	I.KPGMVVTFAPAGVTTEVK.S	2
PARC_cac1_02092005-02.01227.01227.1	2.055	0.2636	1120.44	1120.291	1	564.4	65.0%	1	T.FAPAGVTTEVK.S	1
PARC_cac1_02092005-02.01063.01063.1	2.1956	0.3595	973.52	973.114	1	504.6	61.1%	1	F.APAGVTTEVK.S	1
PARC_cac1_02092005-03.01568.01568.2	5.5598	0.5014	2550.05	2551.793	1	1336.5	59.1%	7	K.SVEMHHEQLEQGVPGDNVGFNVK.N	2
PARC_cac1_02092005-04.01975.01975.2	5.324	0.4158	2451.45	2449.735	1	1077.4	47.7%	1	T.VIVLNHPGQISAGYSPVLDCHTA.H	2
PARC_cac1_02092005-05.02348.02348.3	5.1119	0.4183	2770.97	2771.114	1	825.8	30.0%	1	T.VIVLNHPGQISAGYSPVLDCHTAHIA.C	3
PARC_cac1_02092005-07.03055.03055.3	6.9099	0.5371	3088.88	3087.441	1	1452.7	36.1%	4	T.VIVLNHPGQISAGYSPVLDCHTAHIACR.F	3
PARC_cac1_02092005-05.01942.01942.2	4.7004	0.4871	2345.71	2346.53	1	1513.8	52.4%	1	L.NHPGQISAGYSPVLDCHTAHIA.C	2
PARC_cac1_02092005-03.01967.01967.2	2.6299	0.4602	1411.55	1412.653	1	325.3	72.7%	1	K.FVPSKPMCVEAF.S	2
PARC_cac1_02092005-04.02415.02415.3	3.61	0.2999	2311.25	2312.655	4	436.4	28.9%	1	K.FVPSKPMCVEAFSEYPPLGR.F	3
PARC_cac1_02092005-04.02379.02379.2	3.6598	0.4269	2311.51	2312.655	1	629.3	52.6%	2	K.FVPSKPMCVEAFSEYPPLGR.F	2
PARC_cac1_02092005-04.03035.03035.2	3.4204	0.4311	2458.89	2459.831	1	455.0	42.5%	1	K.FVPSKPMCVEAFSEYPPLGRF.A	2
PARC_cac1_02092005-04.02387.02387.2	4.0223	0.4194	2067.75	2066.345	1	1218.5	58.8%	1	V.PSKPMCVEAFSEYPPLGR.F	2

ORFP:YDL229W

46.3%

613

66602

5.4

SSB1 SGDID:S0002388, Chr IV from 44066-45907

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.02802.02802.2	5.8559	0.5568	2160.49	2161.414	1	1772.1	72.2%	2	K.VIDVDGNPVIEVQYLEETK.T	2 2
	PARC_cac1_02092005-02.02746.02746.2	3.6206	0.3344	1551.49	1552.826	1	1680.7	76.9%	1	K.TFSPQEISAMVLTK.M	2 2
	PARC_cac1_02092005-02.01934.01934.2	3.2062	0.4453	1564.57	1565.769	1	392.5	65.4%	1	K.AVITVPAYFNDAQR.Q	2 2
	PARC_cac1_02092005-04.02214.02214.2	5.4074	0.4967	1886.65	1887.189	1	2403.0	72.2%	1	L.RIINEPTAAAIAYGLGAGK.S	2 2
	PARC_cac1_02092005-03.02059.02059.2	3.255	0.308	1875.21	1876.119	1	383.7	38.9%	1	I.FDLGGGTFDVSLLHIAGGV.Y	2 2
	PARC_cac1_02092005-03.02331.02331.2	5.1346	0.5152	2418.77	2419.569	1	1230.8	52.4%	2	K.STSGNTHLGGQDFDTNLLEHFK.A	2 2
	PARC_cac1_02092005-03.02294.02294.3	4.3153	0.3382	2419.31	2419.569	1	986.5	34.5%	1	K.STSGNTHLGGQDFDTNLLEHFK.A	3 3
	PARC_cac1_02092005-05.03762.03762.3	6.2747	0.4941	3120.74	3121.339	1	2871.1	39.8%	3	K.RTLSSVTQTTVEVDSLFDGEDFESSLTR.A	3 3
	PARC_cac1_02092005-07.03238.03238.2	2.7497	0.1695	3120.93	3121.339	1	326.0	27.8%	1	K.RTLSSVTQTTVEVDSLFDGEDFESSLTR.A	2 2
	PARC_cac1_02092005-03.02132.02132.1	2.6699	0.2858	1394.63	1395.601	40	187.7	50.0%	1	R.ARFEDLNAALFK.S	1 1
	PARC_cac1_02092005-02.02020.02020.1	2.523	0.2634	1169.62	1168.335	2	703.2	66.7%	2	R.FEDLNAALFK.S	1 1
	PARC_cac1_02092005-05.02063.02063.1	2.0558	0.096	1459.74	1460.627	2	295.7	46.2%	1	K.SQIDEVVLVGGSTR.I	1 1
	PARC_cac1_02092005-02.02166.02166.1	2.4802	0.2743	1041.34	1042.177	1	616.8	68.8%	1	K.LLSDFFDGK.Q	1 1
*	PARC_cac1_02092005-02.01791.01791.2	4.4562	0.5073	2462.43	2464.617	1	610.4	40.0%	1	R.TFTTCADNQTTVQFPVYQGER.V	2
	PARC_cac1_02092005-02.02494.02494.1	2.3705	0.3246	1278.45	1279.433	6	185.1	55.0%	1	K.ENTLLGEFDLK.N	1 1
	PARC_cac1_02092005-03.04167.04167.2	4.1778	0.4682	2668.53	2670.154	1	475.7	41.7%	1	K.NIPMMPAGEPVLEAIFEVDANGILK.V	2 2
	PARC_cac1_02092005-02.01158.01158.1	2.3419	0.1385	1095.29	1096.243	1	564.9	68.8%	1	K.MVNQAEEFK.A	1 1
	PARC_cac1_02092005-03.03271.03271.2	4.8787	0.415	2450.17	2451.736	1	738.1	47.6%	1	R.QRLESYVASIEQTVTDPVLSSK.L	2 2
	PARC_cac1_02092005-04.03096.03096.2	3.6553	0.4888	2168.23	2167.418	1	528.5	36.8%	1	R.LESYVASIEQTVTDPVLSSK.L	2 2
	PARC_cac1_02092005-03.00683.00683.3	3.6572	0.331	2758.67	2756.083	1	915.6	30.0%	1	K.SKIEAALSDALAALQIEDPSADELRK.A	3 3
	PARC_cac1_02092005-02.02852.02852.2	4.0965	0.2741	2297.61	2298.555	1	789.2	47.6%	1	E.AALSDALAALQIEDPSADELRK.A	2 2

Similarities: ORFP:YNL209W(20:1)

KERATIN13

44.5%

643

65494

6.6

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02823.02823.2	5.3378	0.4062	2292.73	2293.623	1	676.9	55.3%	1	V.TINQSLLQPLNVEIDPEIQK.V	2
*	PARC_cac1_02092005-02.02832.02832.1	1.8855	0.1619	1395.78	1395.596	4	351.8	54.5%	1	Q.PLNVEIDPEIQK.V	1
*	PARC_cac1_02092005-02.01266.01266.1	2.8558	0.2256	1184.55	1185.32	1	465.3	72.2%	1	L.NVEIDPEIQK.V	1
*	PARC_cac1_02092005-02.02062.02062.1	3.0704	0.268	1383.53	1384.532	1	844.6	72.7%	2	K.SLNNQFASFIDK.V	1
*	PARC_cac1_02092005-02.02031.02031.2	3.8867	0.3749	1384.03	1384.532	1	1045.1	77.3%	2	K.SLNNQFASFIDK.V	2
*	PARC_cac1_02092005-04.02675.02675.2	3.7439	0.4394	1639.13	1639.852	1	1021.7	65.4%	1	K.SLNNQFASFIDKVR.F	2
*	PARC_cac1_02092005-03.02892.02892.3	6.6377	0.3931	2934.62	2934.279	1	2454.6	39.1%	1	R.FLEQQNQVLQTKWELLQQVDTSTR.T	3
*	PARC_cac1_02092005-02.01958.01958.2	4.1625	0.4391	1476.13	1476.629	1	2143.6	86.4%	4	K.WELLQQVDTSTR.T	2
*	PARC_cac1_02092005-05.02475.02475.1	2.2731	0.1613	1476.61	1476.629	3	202.8	50.0%	1	K.WELLQQVDTSTR.T	1
*	PARC_cac1_02092005-03.03458.03458.2	5.3985	0.6197	1994.05	1995.202	1	1063.6	76.7%	4	R.THNLEPYFESFINNLR.R	2
*	PARC_cac1_02092005-03.03443.03443.3	4.0208	0.1725	1997.36	1995.202	1	1568.7	43.3%	1	R.THNLEPYFESFINNLR.R	3
*	PARC_cac1_02092005-05.03632.03632.2	2.7393	0.2183	2150.87	2151.389	2	278.8	37.5%	1	R.THNLEPYFESFINNLRR.G	2
	PARC_cac1_02092005-02.01094.01094.1	2.7388	0.1571	1152.48	1153.234	10	454.5	75.0%	1	R.NKYEDEINK.R	1 1 1 1
	PARC_cac1_02092005-03.00822.00822.2	3.2835	0.197	1309.23	1309.422	1	900.0	77.8%	1	R.NKYEDEINKR.T	2 2 2 2
	PARC_cac1_02092005-03.00864.00864.1	2.6112	0.2073	1310.55	1309.422	1	284.6	61.1%	2	R.NKYEDEINKR.T	1 1 1 1
*	PARC_cac1_02092005-04.01456.01456.2	2.9492	0.246	1550.47	1550.755	1	999.6	70.8%	1	K.RTNAENEFVTIKK.D	2
*	PARC_cac1_02092005-02.01134.01134.1	2.0881	0.2804	999.47	1000.111	35	297.0	56.2%	1	K.DVDGAYMTK.V	1
*	PARC_cac1_02092005-07.02830.02830.2	3.374	0.2784	2916.05	2915.22	1	437.0	31.2%	2	L.YQAELSQMQTQISETNVILSMDNNR.Q	2
*	PARC_cac1_02092005-02.01110.01110.1	3.3107	0.2536	1340.4	1341.461	1	718.0	63.6%	1	K.SKAEAESLYQSK.Y	1
*	PARC_cac1_02092005-04.01818.01818.2	3.0974	0.2553	2503.79	2502.74	1	677.2	40.5%	1	K.SKAEAESLYQSKYEELQITAGR.H	2
*	PARC_cac1_02092005-02.01126.01126.1	2.5088	0.352	1125.36	1126.208	1	560.1	61.1%	1	K.AEAESLYQSK.Y	1
*	PARC_cac1_02092005-02.01326.01326.1	2.728	0.2804	1179.53	1180.303	1	584.7	72.2%	5	K.YEELQITAGR.H	1
*	PARC_cac1_02092005-03.02219.02219.3	4.1786	0.3619	2458.31	2458.691	1	925.3	34.5%	1	K.KQISNLQQSISDAEQRGENALK.D	3
*	PARC_cac1_02092005-02.01446.01446.2	4.9383	0.3661	1716.99	1717.833	1	1914.9	78.6%	1	K.QISNLQQSISDAEQR.G	2
*	PARC_cac1_02092005-02.02312.02312.2	4.3782	0.371	2330.07	2330.517	1	557.5	45.0%	1	K.QISNLQQSISDAEQRGENALK.D	2
*	PARC_cac1_02092005-02.01628.01628.2	4.3324	0.2442	1358.17	1358.491	1	2144.1	86.4%	1	K.LNDLEDALQQAK.E	2
*	PARC_cac1_02092005-02.01626.01626.1	2.7691	0.1084	1359.5	1358.491	1	811.2	63.6%	2	K.LNDLEDALQQAK.E	1
*	PARC_cac1_02092005-02.01318.01318.1	2.8297	0.1255	1143.39	1142.269	2	517.3	75.0%	2	R.DYQELMNTK.L	1
*2	PARC_cac1_02092005-04.02543.02543.2	4.5682	0.2608	1278.65	1278.491	1	2040.2	90.0%	1	K.LALDLEIATYR.T	2 2 2 2
*2	PARC_cac1_02092005-04.02538.02538.1	2.7546	0.2092	1279.57	1278.491	7	331.6	60.0%	10	K.LALDLEIATYR.T	1 1 1 1
*	PARC_cac1_02092005-02.01170.01170.1	1.8525	0.1743	1033.52	1034.111	25	185.8	56.2%	1	R.TLLEGEESR.M	1
*	PARC_cac1_02092005-07.01388.01388.2	5.2468	0.2646	2386.95	2385.298	1	807.3	35.0%	2	R.GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR.G	2
*	PARC_cac1_02092005-04.01275.01275.3	4.6536	0.2595	3312.95	3314.208	1	694.5	22.4%	1	R.GSYGSGGGSYGSGGSSYGSGGGGGGHGSYGSGSSSGGYR.G	3

Similarities: KERATIN21(3:30)
KERATIN17(3:30)
KERATIN20(5:28)
KERATIN16(2:31)
KERATIN19(2:31)

ORFP:YNL209W

42.9%

613

66595

5.5

SSB2 SGDID:S0005153, Chr XIV from 252058-253899

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.02802.02802.2	5.8559	0.5568	2160.49	2161.414	1	1772.1	72.2%	2	K.VIDVDGNPVIEVQYLEETK.T	2 2
PARC_cac1_02092005-02.02746.02746.2	3.6206	0.3344	1551.49	1552.826	1	1680.7	76.9%	1	K.TFSPQEISAMVLTK.M	2 2
PARC_cac1_02092005-02.01934.01934.2	3.2062	0.4453	1564.57	1565.769	1	392.5	65.4%	1	K.AVITVPAYFNDAQR.Q	2 2
PARC_cac1_02092005-04.02214.02214.2	5.4074	0.4967	1886.65	1887.189	1	2403.0	72.2%	1	L.RIINEPTAAAIAYGLGAGK.S	2 2
PARC_cac1_02092005-03.02059.02059.2	3.255	0.308	1875.21	1876.119	1	383.7	38.9%	1	I.FDLGGGTFDVSLLHIAGGV.Y	2 2
PARC_cac1_02092005-03.02331.02331.2	5.1346	0.5152	2418.77	2419.569	1	1230.8	52.4%	2	K.STSGNTHLGGQDFDTNLLEHFK.A	2 2
PARC_cac1_02092005-03.02294.02294.3	4.3153	0.3382	2419.31	2419.569	1	986.5	34.5%	1	K.STSGNTHLGGQDFDTNLLEHFK.A	3 3
PARC_cac1_02092005-05.03762.03762.3	6.2747	0.4941	3120.74	3121.339	1	2871.1	39.8%	3	K.RTLSSVTQTTVEVDSLFDGEDFESSLTR.A	3 3
PARC_cac1_02092005-07.03238.03238.2	2.7497	0.1695	3120.93	3121.339	1	326.0	27.8%	1	K.RTLSSVTQTTVEVDSLFDGEDFESSLTR.A	2 2
PARC_cac1_02092005-03.02132.02132.1	2.6699	0.2858	1394.63	1395.601	40	187.7	50.0%	1	R.ARFEDLNAALFK.S	1 1
PARC_cac1_02092005-02.02020.02020.1	2.523	0.2634	1169.62	1168.335	2	703.2	66.7%	2	R.FEDLNAALFK.S	1 1
PARC_cac1_02092005-05.02063.02063.1	2.0558	0.096	1459.74	1460.627	2	295.7	46.2%	1	K.SQIDEVVLVGGSTR.I	1 1
PARC_cac1_02092005-02.02166.02166.1	2.4802	0.2743	1041.34	1042.177	1	616.8	68.8%	1	K.LLSDFFDGK.Q	1 1
PARC_cac1_02092005-02.02494.02494.1	2.3705	0.3246	1278.45	1279.433	6	185.1	55.0%	1	K.ENTLLGEFDLK.N	1 1
PARC_cac1_02092005-03.04167.04167.2	4.1778	0.4682	2668.53	2670.154	1	475.7	41.7%	1	K.NIPMMPAGEPVLEAIFEVDANGILK.V	2 2
PARC_cac1_02092005-02.01158.01158.1	2.3419	0.1385	1095.29	1096.243	1	564.9	68.8%	1	K.MVNQAEEFK.A	1 1
PARC_cac1_02092005-03.03271.03271.2	4.8787	0.415	2450.17	2451.736	1	738.1	47.6%	1	R.QRLESYVASIEQTVTDPVLSSK.L	2 2
PARC_cac1_02092005-04.03096.03096.2	3.6553	0.4888	2168.23	2167.418	1	528.5	36.8%	1	R.LESYVASIEQTVTDPVLSSK.L	2 2
PARC_cac1_02092005-03.00683.00683.3	3.6572	0.331	2758.67	2756.083	1	915.6	30.0%	1	K.SKIEAALSDALAALQIEDPSADELRK.A	3 3
PARC_cac1_02092005-02.02852.02852.2	4.0965	0.2741	2297.61	2298.555	1	789.2	47.6%	1	E.AALSDALAALQIEDPSADELRK.A	2 2

Similarities: ORFP:YDL229W(20:0)

ORFP:YKL152C

42.5%

247

27609

8.8

GPM1 SGDID:S0001635, Chr XI from 164386-163643, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01275.01275.1	2.0659	0.1742	1171.77	1172.367	31	431.4	50.0%	1	R.AIQTANIALEK.A	1
*	PARC_cac1_02092005-04.02006.02006.2	4.6621	0.4829	2073.03	2073.313	1	2101.4	72.2%	2	R.RSFDVPPPPIDASSPFSQK.G	2
*	PARC_cac1_02092005-02.03264.03264.2	2.7436	0.2577	2143.43	2144.43	1	427.9	41.7%	1	K.YVDPNVLPETESLALVIDR.L	2
*	PARC_cac1_02092005-03.03023.03023.2	3.6376	0.3046	1767.47	1767.032	1	553.8	63.3%	1	D.PNVLPETESLALVIDR.L	2
*	PARC_cac1_02092005-04.01364.01364.2	3.5672	0.2747	1270.53	1270.492	1	1443.2	81.8%	1	K.TVMIAAHGNSLR.G	2
*	PARC_cac1_02092005-02.03704.03704.2	2.9217	0.2688	2025.85	2026.381	2	235.8	44.1%	1	K.LNIPTGIPLVFELDENLK.P	2
*	PARC_cac1_02092005-04.02014.02014.2	3.8859	0.3215	2577.69	2576.869	1	509.1	44.0%	1	K.PSKPSYYLDPEAAAAGAAAVANQGKK.-	2

KERATIN22

40.9%

645

65865

8.0

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.01690.01690.1	2.7137	0.4044	1320.54	1321.354	1	305.8	53.3%	1	R.HGGGGGGFGGGGFGSR.S	1
*	PARC_cac1_02092005-05.01704.01704.2	4.6476	0.5711	1322.41	1321.354	1	2150.6	83.3%	1	R.HGGGGGGFGGGGFGSR.S	2
*	PARC_cac1_02092005-04.02179.02179.2	3.8764	0.4801	1839.77	1840.005	1	1322.2	52.4%	1	K.SISISVAGGGGGFGAAGGFGGR.G	2
*	PARC_cac1_02092005-04.02267.02267.3	4.4476	0.2699	2399.39	2400.445	1	3676.2	41.4%	1	G.GSGFGGGSGFGGGSGFSGGGFGGGGFGGGR.F	3
*	PARC_cac1_02092005-04.02290.02290.2	5.0532	0.3938	2401.19	2400.445	1	2967.7	53.4%	5	G.GSGFGGGSGFGGGSGFSGGGFGGGGFGGGR.F	2
*	PARC_cac1_02092005-04.02271.02271.1	1.8633	0.1769	1126.31	1127.161	1	240.1	50.0%	1	F.SGGGFGGGGFGGGR.F	1
*	PARC_cac1_02092005-05.03294.03294.2	5.6857	0.4857	2671.83	2672.919	1	1336.7	43.3%	1	R.FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEV.S	2
*	PARC_cac1_02092005-05.03214.03214.2	3.7231	0.5018	2971.09	2973.233	1	313.2	24.2%	1	R.FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVN.Q	2
*	PARC_cac1_02092005-05.04026.04026.3	3.9501	0.3486	3753.32	3753.168	1	482.9	23.1%	1	R.FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPL.N	3
*	PARC_cac1_02092005-07.03286.03286.3	4.4502	0.3351	4095.68	4094.578	1	1193.8	23.8%	2	R.FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK.V	3
*	PARC_cac1_02092005-07.03340.03340.3	5.0519	0.4752	4307.69	4308.8	1	944.5	20.6%	1	R.FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVKVD.P	3
*	PARC_cac1_02092005-07.03039.03039.3	5.69	0.4391	3945.92	3947.402	1	1266.1	23.2%	1	F.GGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK.V	3
*	PARC_cac1_02092005-04.03851.03851.3	6.965	0.5094	3306.17	3304.832	1	1336.5	33.3%	1	K.WELLQQMNVGTRPINLEPIFQGYIDSLK.R	3
*	PARC_cac1_02092005-06.01582.01582.2	2.817	0.2656	2318.55	2318.681	9	243.2	31.6%	1	V.GTRPINLEPIFQGYIDSLKR.Y	2
*	PARC_cac1_02092005-02.01898.01898.2	4.8951	0.4475	2256.69	2257.434	1	1850.3	61.1%	1	R.TSQNSELNNMQDLVEDYKK.K	2
*	PARC_cac1_02092005-02.01315.01315.1	2.3089	0.2777	1068.64	1069.218	1	784.9	75.0%	1	K.DVDNAYMIK.V	1
*	PARC_cac1_02092005-07.02878.02878.3	5.533	0.509	3049.94	3050.367	1	1759.8	37.5%	2	K.VLYDAEISQIHQSVTDTNVILSMDNSR.N	3
	PARC_cac1_02092005-02.03082.03082.1	3.4285	0.2609	1329.42	1330.521	1	696.9	72.7%	4	R.NLDLDSIIAEVK.A	1 1 1 1
	PARC_cac1_02092005-02.01130.01130.1	1.9669	0.256	1107.57	1108.196	19	380.1	56.2%	1	K.AQYEEIAQR.S	1 1 1 1
*	PARC_cac1_02092005-03.00899.00899.1	2.1807	0.1682	1391.63	1392.508	39	253.1	45.5%	1	R.SKEEAEALYHSK.Y	1
*	PARC_cac1_02092005-03.01018.01018.2	4.4922	0.444	1392.83	1392.508	1	1962.7	86.4%	2	R.SKEEAEALYHSK.Y	2
*	PARC_cac1_02092005-04.01482.01482.1	2.0116	0.2003	1193.53	1194.33	1	544.5	66.7%	2	K.YEELQVTVGR.H	1
*	PARC_cac1_02092005-02.01760.01760.1	2.3788	0.3446	1371.63	1372.518	2	582.7	59.1%	1	K.LNDLEEALQQAK.E	1
	PARC_cac1_02092005-03.02291.02291.1	2.0081	0.1886	1263.98	1264.464	13	243.1	45.0%	1	K.LALDVEIATYR.K	1 1 1 1 1

Similarities: KERATIN21(3:21)
KERATIN18(3:21)
KERATIN17(2:22)
KERATIN15(1:23)
KERATIN16(1:23)

ORFP:YDR382W

40.9%

110

11050

4.1

RPP2B SGDID:S0002790, Chr IV from 1239480-1239812

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.03127.03127.2	3.8662	0.4491	2222.35	2220.574	1	393.4	38.1%	1	K.YLAAYLLLVQGGNAAPSAADIK.A	2
*	PARC_cac1_02092005-02.01910.01910.1	3.1664	0.3791	1202.52	1203.378	1	781.9	70.0%	1	R.INELLSSLEGK.G	1
*	PARC_cac1_02092005-02.01715.01715.1	2.9882	0.2719	1274.37	1274.414	1	531.5	59.1%	1	K.GSLEEIIAEGQK.K	1

U	ORFP:YBR031W	12	16	36.2%	362	39092	10.6	RPL4A SGDID:S0000235, Chr II from 300125-301213
U	ORFP:YDR012W	12	16	36.2%	362	39062	10.6	RPL4B SGDID:S0002419, Chr IV from 471849-472937

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-05.04106.04106.3	4.0447	0.2496	3634.13	3636.186	1	363.3	22.1%	1	H.SLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNK.N	3
PARC_cac1_02092005-07.03451.03451.2	3.6215	0.3897	2397.79	2396.795	1	447.6	35.7%	1	L.PAVFSAPIRPDIVHTVFTSVNK.N	2
PARC_cac1_02092005-05.02503.02503.2	4.9692	0.5158	1981.75	1982.29	1	1500.1	55.9%	1	F.SAPIRPDIVHTVFTSVNK.N	2
PARC_cac1_02092005-02.03314.03314.2	4.8494	0.4862	1882.57	1882.205	1	887.0	68.8%	1	K.IPEIPLVVSTDLESIQK.T	2
PARC_cac1_02092005-03.01231.01231.1	2.0795	0.1248	1010.61	1011.166	32	313.7	55.6%	1	K.AVGAHSDLLK.V	1
PARC_cac1_02092005-04.03172.03172.2	4.6155	0.4541	2612.39	2612.992	1	754.4	44.0%	2	R.NVPGVETANVASLNLLQLAPGAHLGR.F	2
PARC_cac1_02092005-05.03475.03475.2	2.9199	0.3081	2401.21	2399.756	1	616.5	32.6%	1	V.PGVETANVASLNLLQLAPGAHLGR.F	2
PARC_cac1_02092005-05.02871.02871.1	2.9371	0.407	1559.94	1560.84	1	365.1	50.0%	1	A.SLNLLQLAPGAHLGR.F	1
PARC_cac1_02092005-05.02867.02867.2	3.7004	0.3462	1560.29	1560.84	1	547.4	57.1%	1	A.SLNLLQLAPGAHLGR.F	2
PARC_cac1_02092005-04.02775.02775.1	2.7427	0.3347	1314.34	1313.539	1	744.1	65.0%	3	R.FVIWTEAAFTK.L	1
PARC_cac1_02092005-03.01819.01819.2	2.5067	0.192	1313.35	1313.453	9	628.2	59.1%	1	L.PSHIISTSDVTR.I	2
PARC_cac1_02092005-03.01546.01546.2	5.3558	0.4628	2112.83	2113.379	1	1206.4	55.3%	2	R.IINSSEIQSAIRPAGQATQK.R	2

ORFP:YLL024C

35.4%

639

69470

5.1

SSA2 SGDID:S0003947, Chr XII from 97484-95565, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-03.01726.01726.2	3.4679	0.4736	2144.91	2145.461	1	434.7	47.2%	1	K.LIDVDGKPQIQVEFKGETK.N	2 2
	PARC_cac1_02092005-02.01203.01203.1	1.9819	0.2024	1068.34	1069.156	3	216.8	61.1%	1	K.ETAESYLGAK.V	1 1
	PARC_cac1_02092005-02.01866.01866.2	3.3987	0.3754	1897.21	1896.067	3	328.6	46.9%	1	K.VNDAVVTVPAYFNDSQR.Q	2 2 2
	PARC_cac1_02092005-04.01778.01778.1	2.5715	0.1952	1274.4	1275.493	1	513.0	61.1%	3	R.LVNHFIQEFK.R	1 1
	PARC_cac1_02092005-04.01782.01782.2	3.4268	0.3326	1275.13	1275.493	1	1252.3	83.3%	1	R.LVNHFIQEFK.R	2 2
	PARC_cac1_02092005-05.04367.04367.2	3.1751	0.3296	3126.51	3125.416	1	239.3	27.8%	1	K.RTLSSSAQTSVEIDSLFEGIDFYTSITR.A	2 2
	PARC_cac1_02092005-03.03911.03911.2	3.3123	0.1766	2496.55	2493.73	1	379.3	31.0%	1	S.AQTSVEIDSLFEGIDFYTSITR.A	2 2
	PARC_cac1_02092005-03.02475.02475.2	3.3189	0.3692	1528.67	1527.686	1	957.6	72.7%	1	R.ARFEELCADLFR.S	2 2 2 2
	PARC_cac1_02092005-04.01740.01740.2	4.4876	0.1208	1460.87	1460.627	1	1673.8	80.8%	1	K.SQVDEIVLVGGSTR.I	2 2
	PARC_cac1_02092005-02.03871.03871.2	4.8697	0.3668	2557.89	2557.018	1	747.6	50.0%	1	K.TQDLLLLDVAPLSLGIETAGGVMTK.L	2 2
	PARC_cac1_02092005-04.03199.03199.2	3.7312	0.4198	2714.39	2714.992	1	611.4	39.1%	1	K.KSEVFSTYADNQPGVLIQVFEGER.A	2 2
	PARC_cac1_02092005-03.03243.03243.3	5.8107	0.1936	2714.6	2714.992	1	1580.1	35.9%	1	K.KSEVFSTYADNQPGVLIQVFEGER.A	3 3
	PARC_cac1_02092005-03.03462.03462.2	3.65	0.3906	2589.33	2586.817	1	387.1	36.4%	1	K.SEVFSTYADNQPGVLIQVFEGER.A	2 2
	PARC_cac1_02092005-02.02734.02734.2	3.9947	0.4484	1773.25	1772.955	1	1144.7	66.7%	1	Y.ADNQPGVLIQVFEGER.A	2 2 2 2
	PARC_cac1_02092005-03.02751.02751.2	3.9325	0.4982	1939.21	1939.222	1	755.0	55.9%	1	K.DNNLLGKFELSGIPPAPR.G	2 2 2 2
	PARC_cac1_02092005-03.01766.01766.1	2.7211	0.2654	1184.76	1184.381	1	481.5	65.0%	1	K.FELSGIPPAPR.G	1 1 1 1
	PARC_cac1_02092005-07.03363.03363.2	3.1103	0.3202	2532.79	2531.822	1	762.6	37.0%	2	R.GVPQIEVTFDVDSNGILNVSAVEK.G	2 2
*	PARC_cac1_02092005-05.02735.02735.3	6.7379	0.4097	2884.34	2885.111	1	1968.2	38.5%	3	K.KAEETIAWLDSNTTATKEEFDDQLK.E	3

Similarities: ORFP:YAL005C(14:4)
ORFP:YBL075C(5:13)
ORFP:YER103W(7:11)

KERATIN03

34.7%

593

59519

5.2

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01660.01660.3	3.8198	0.2612	2101.04	2098.193	1	976.8	33.0%	1	I.SSSKGSLGGGFSSGGFSGGSFSR.G	3
*	PARC_cac1_02092005-03.01811.01811.2	5.6019	0.517	1708.19	1708.784	1	1255.7	58.3%	3	K.GSLGGGFSSGGFSGGSFSR.G	2
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
*	PARC_cac1_02092005-02.01230.01230.1	2.9782	0.2677	1381.49	1382.467	1	867.1	63.6%	2	R.ALEESNYELEGK.I	1
*	PARC_cac1_02092005-02.02716.02716.2	2.8696	0.2289	1556.85	1557.744	1	733.4	61.5%	1	K.NQILNLTTDNANIL.L	2
*	PARC_cac1_02092005-07.03132.03132.3	6.6994	0.249	2368.13	2368.652	1	2410.3	46.2%	3	K.NQILNLTTDNANILLQIDNAR.L	3
*	PARC_cac1_02092005-04.03254.03254.2	6.8794	0.4701	2368.65	2368.652	1	2841.4	65.0%	7	K.NQILNLTTDNANILLQIDNAR.L	2
*	PARC_cac1_02092005-02.01171.01171.1	2.1224	0.257	994.49	994.092	2	401.7	64.3%	1	K.YENEVALR.Q	1
*	PARC_cac1_02092005-02.01570.01570.1	2.5409	0.2237	1109.53	1110.168	1	725.1	75.0%	2	K.DAEAWFNEK.S	1
*	PARC_cac1_02092005-04.02359.02359.2	5.528	0.4992	2212.33	2213.403	1	2068.4	66.7%	1	K.SKELTTEIDNNIEQISSYK.S	2
*	PARC_cac1_02092005-02.02410.02410.2	4.7959	0.3573	1997.09	1998.151	1	991.4	59.4%	3	K.ELTTEIDNNIEQISSYK.S	2
*	PARC_cac1_02092005-07.03012.03012.2	5.4118	0.3293	1798.59	1798.09	1	2150.9	73.3%	1	R.NVQALEIELQSQLALK.Q	2
*	PARC_cac1_02092005-03.03970.03970.2	6.1683	0.523	2748.23	2748.075	1	1818.8	56.8%	1	R.YCVQLSQIQAQISALEEQLQQIR.A	2
*	PARC_cac1_02092005-02.01932.01932.2	4.6821	0.4158	2084.59	2084.21	1	1998.3	68.8%	1	R.AETECQNTEYQQLLDIK.I	2
*	PARC_cac1_02092005-03.01491.01491.2	4.0763	0.3437	1435.27	1435.623	1	1727.7	85.0%	1	K.IRLENEIQTYR.S	2
*	PARC_cac1_02092005-07.01446.01446.1	2.8582	0.2129	1165.64	1166.276	22	413.6	68.8%	2	R.LENEIQTYR.S	1
*	PARC_cac1_02092005-07.01447.01447.1	2.6013	0.3858	1264.61	1263.307	1	372.0	53.8%	1	R.SLLEGEGSSGGGGR.G	1
*	PARC_cac1_02092005-06.00743.00743.2	2.7932	0.0961	2034.71	2034.966	11	265.9	26.0%	1	S.FGGGYGGGSSGGGSSGGGYGGGHGGS.S	2

Similarities: KERATIN02(1:17)
KERATIN05(1:17)
KERATIN12(1:17)
KERATIN08(1:17)
KERATIN07(1:17)
KERATIN06(1:17)

ORFP:YHR174W

34.6%

437

46914

6.0

ENO2 SGDID:S0001217, Chr VIII from 451325-452638

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01350.01350.2	3.4459	0.252	1417.67	1417.556	1	875.7	70.8%	1	R.GNPTVEVELTTEK.G	2 2
*2	PARC_cac1_02092005-02.02755.02755.2	5.4473	0.4307	1579.07	1579.747	1	1940.0	82.1%	1	K.AVDDFLLSLDGTANK.S	2 2
	PARC_cac1_02092005-02.04134.04134.2	2.5135	0.2568	1559.75	1559.889	9	345.0	46.2%	1	K.TSPYVLPVPFLNVL.N	2 2
	PARC_cac1_02092005-05.04514.04514.3	4.3612	0.4284	3741.26	3740.355	1	456.9	24.3%	4	K.TSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAK.T	3 3
	PARC_cac1_02092005-03.02803.02803.2	2.8998	0.2758	2200.35	2199.489	1	438.4	31.8%	1	L.NGGSHAGGALALQEFMIAPTGAK.T	2 2
	PARC_cac1_02092005-04.02544.02544.2	4.3942	0.3909	2084.73	2085.386	1	1279.3	54.8%	1	N.GGSHAGGALALQEFMIAPTGAK.T	2 2
	PARC_cac1_02092005-03.01258.01258.1	1.9483	0.1316	1159.55	1160.315	8	406.0	55.6%	1	R.IGSEVYHNLK.S	1 1
	PARC_cac1_02092005-04.04140.04140.3	7.2277	0.5227	3414.02	3415.739	1	1405.1	31.1%	6	K.RYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A	3 3
	PARC_cac1_02092005-02.04355.04355.3	5.5755	0.3715	3259.91	3259.551	1	1397.8	30.5%	1	R.YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A	3 3
	PARC_cac1_02092005-04.03700.03700.3	6.6821	0.5755	2985.95	2986.269	1	2021.2	40.2%	2	K.RYPIVSIEDPFAEDDWEAWSHFFK.T	3 3
*	PARC_cac1_02092005-04.02352.02352.2	5.2795	0.501	1855.71	1856.086	1	2714.5	70.6%	1	K.TAGIQIVADDLTVTNPAR.I	2

Similarities: ORFP:YGR254W(10:1)

ORFP:YAL005C

33.2%

642

69768

5.1

SSA1 SGDID:S0000004, Chr I from 141433-139505, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-03.01726.01726.2	3.4679	0.4736	2144.91	2145.461	1	434.7	47.2%	1	K.LIDVDGKPQIQVEFKGETK.N	2 2
	PARC_cac1_02092005-02.01203.01203.1	1.9819	0.2024	1068.34	1069.156	3	216.8	61.1%	1	K.ETAESYLGAK.V	1 1
	PARC_cac1_02092005-02.01866.01866.2	3.3987	0.3754	1897.21	1896.067	3	328.6	46.9%	1	K.VNDAVVTVPAYFNDSQR.Q	2 2 2
	PARC_cac1_02092005-04.01778.01778.1	2.5715	0.1952	1274.4	1275.493	1	513.0	61.1%	3	R.LVNHFIQEFK.R	1 1
	PARC_cac1_02092005-04.01782.01782.2	3.4268	0.3326	1275.13	1275.493	1	1252.3	83.3%	1	R.LVNHFIQEFK.R	2 2
	PARC_cac1_02092005-05.04367.04367.2	3.1751	0.3296	3126.51	3125.416	1	239.3	27.8%	1	K.RTLSSSAQTSVEIDSLFEGIDFYTSITR.A	2 2
	PARC_cac1_02092005-03.03911.03911.2	3.3123	0.1766	2496.55	2493.73	1	379.3	31.0%	1	S.AQTSVEIDSLFEGIDFYTSITR.A	2 2
	PARC_cac1_02092005-03.02475.02475.2	3.3189	0.3692	1528.67	1527.686	1	957.6	72.7%	1	R.ARFEELCADLFR.S	2 2 2 2
	PARC_cac1_02092005-04.01740.01740.2	4.4876	0.1208	1460.87	1460.627	1	1673.8	80.8%	1	K.SQVDEIVLVGGSTR.I	2 2
	PARC_cac1_02092005-02.03871.03871.2	4.8697	0.3668	2557.89	2557.018	1	747.6	50.0%	1	K.TQDLLLLDVAPLSLGIETAGGVMTK.L	2 2
	PARC_cac1_02092005-02.02734.02734.2	3.9947	0.4484	1773.25	1772.955	1	1144.7	66.7%	1	Y.ADNQPGVLIQVFEGER.A	2 2 2 2
	PARC_cac1_02092005-03.02751.02751.2	3.9325	0.4982	1939.21	1939.222	1	755.0	55.9%	1	K.DNNLLGKFELSGIPPAPR.G	2 2 2 2
	PARC_cac1_02092005-03.01766.01766.1	2.7211	0.2654	1184.76	1184.381	1	481.5	65.0%	1	K.FELSGIPPAPR.G	1 1 1 1
	PARC_cac1_02092005-07.03363.03363.2	3.1103	0.3202	2532.79	2531.822	1	762.6	37.0%	2	R.GVPQIEVTFDVDSNGILNVSAVEK.G	2 2
*	PARC_cac1_02092005-02.01339.01339.2	3.2902	0.1307	2167.33	2164.331	1	428.3	47.4%	1	K.NTISEAGDKLEQADKDTVTK.K	2

Similarities: ORFP:YLL024C(14:1)
ORFP:YBL075C(5:10)
ORFP:YER103W(4:11)

U	ORFP:YBL003C	7	11	32.6%	132	13989	10.7	HTA2 SGDID:S0000099, Chr II from 235754-235356, reverse complement
U	ORFP:YDR225W	7	11	32.6%	132	13989	10.7	HTA1 SGDID:S0002633, Chr IV from 915521-915919

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-04.00127.00127.2	4.8539	0.4123	1987.99	1988.291	1	1710.3	63.9%	1	T.AVLEYLAAEILELAGNAAR.D	2
PARC_cac1_02092005-03.02318.02318.2	4.4218	0.4614	1960.15	1959.256	1	1069.6	58.3%	1	K.LLGNVTIAQGGVLPNIHQN.L	2
PARC_cac1_02092005-05.03014.03014.2	4.5493	0.4332	2410.79	2410.866	1	766.0	43.2%	5	K.LLGNVTIAQGGVLPNIHQNLLPK.K	2
PARC_cac1_02092005-07.02692.02692.3	3.7541	0.1514	2539.04	2539.04	1	990.1	35.9%	1	K.LLGNVTIAQGGVLPNIHQNLLPKK.S	3
PARC_cac1_02092005-05.02720.02720.2	3.9658	0.4444	2297.35	2297.706	2	377.7	38.1%	1	L.LGNVTIAQGGVLPNIHQNLLPK.K	2
PARC_cac1_02092005-05.02220.02220.2	3.5307	0.4102	1500.03	1500.784	1	1033.4	73.1%	1	Q.GGVLPNIHQNLLPK.K	2
PARC_cac1_02092005-05.02988.02988.1	2.7159	0.1248	1173.5	1174.388	24	360.0	66.7%	1	L.PNIHQNLLPK.K	1

ORFP:YGR254W

30.4%

437

46816

6.6

ENO1 SGDID:S0003486, Chr VII from 1000930-1002243

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01350.01350.2	3.4459	0.252	1417.67	1417.556	1	875.7	70.8%	1	R.GNPTVEVELTTEK.G	2 2
*2	PARC_cac1_02092005-02.02755.02755.2	5.4473	0.4307	1579.07	1579.747	1	1940.0	82.1%	1	K.AVDDFLISLDGTANK.S	2 2
	PARC_cac1_02092005-02.04134.04134.2	2.5135	0.2568	1559.75	1559.889	9	345.0	46.2%	1	K.TSPYVLPVPFLNVL.N	2 2
	PARC_cac1_02092005-05.04514.04514.3	4.3612	0.4284	3741.26	3740.355	1	456.9	24.3%	4	K.TSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAK.T	3 3
	PARC_cac1_02092005-03.02803.02803.2	2.8998	0.2758	2200.35	2199.489	1	438.4	31.8%	1	L.NGGSHAGGALALQEFMIAPTGAK.T	2 2
	PARC_cac1_02092005-04.02544.02544.2	4.3942	0.3909	2084.73	2085.386	1	1279.3	54.8%	1	N.GGSHAGGALALQEFMIAPTGAK.T	2 2
	PARC_cac1_02092005-03.01258.01258.1	1.9483	0.1316	1159.55	1160.315	8	406.0	55.6%	1	R.IGSEVYHNLK.S	1 1
	PARC_cac1_02092005-04.04140.04140.3	7.2277	0.5227	3414.02	3415.739	1	1405.1	31.1%	6	K.RYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A	3 3
	PARC_cac1_02092005-02.04355.04355.3	5.5755	0.3715	3259.91	3259.551	1	1397.8	30.5%	1	R.YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A	3 3
	PARC_cac1_02092005-04.03700.03700.3	6.6821	0.5755	2985.95	2986.269	1	2021.2	40.2%	2	K.RYPIVSIEDPFAEDDWEAWSHFFK.T	3 3

Similarities: ORFP:YHR174W(10:0)

ORFP:YCR028C-A

30.4%

135

15386

8.3

RIM1 SGDID:S0007222, Chr III from 173432-173191,173107-172942, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.03646.03646.3	5.9445	0.4479	3217.85	3219.54	1	1608.9	39.0%	2	R.RDGQTNWYNITVFNEPQINFLTEYVR.K	3
*	PARC_cac1_02092005-02.01003.01003.2	4.7867	0.5374	1578.39	1578.587	1	1817.8	82.1%	1	K.KLEDAEGQENAASSE.-	2

U	ORFP:YBR009C	4	6	29.1%	103	11368	11.4	HHF1 SGDID:S0000213, Chr II from 255641-255330, reverse complement
U	ORFP:YNL030W	4	6	29.1%	103	11368	11.4	HHF2 SGDID:S0004975, Chr XIV from 576723-577034

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.01688.01688.1	1.996	0.3223	1334.78	1335.546	2	288.0	55.0%	1	K.RISGLIYEEVR.A	1
PARC_cac1_02092005-02.01598.01598.1	2.4604	0.1082	1180.7	1179.359	1	342.0	72.2%	2	R.ISGLIYEEVR.A	1
PARC_cac1_02092005-05.02618.02618.1	2.3602	0.1777	1308.62	1309.546	1	759.9	59.1%	2	K.TVTSLDVVYALK.R	1
PARC_cac1_02092005-07.01850.01850.1	1.9511	0.2494	715.01	714.796	2	405.0	75.0%	1	R.TLYGFGG.-	1

ORFP:YGL123W

28.3%

254

27450

10.4

RPS2 SGDID:S0003091, Chr VII from 277621-278385

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.03586.03586.2	3.8839	0.2867	1743.21	1741.081	1	863.5	57.1%	1	K.ITTIEEIFLHSLPVK.E	2
*	PARC_cac1_02092005-02.03867.03867.3	4.6318	0.2766	2319.29	2317.703	1	980.6	40.8%	1	K.EFQIIDTLLPGLQDEVMNIK.P	3
*	PARC_cac1_02092005-02.03868.03868.2	3.8622	0.1308	2320.45	2317.703	1	486.9	52.6%	1	K.EFQIIDTLLPGLQDEVMNIK.P	2
*	PARC_cac1_02092005-02.03975.03975.2	3.3854	0.245	2515.89	2513.952	2	367.5	42.9%	1	K.EFQIIDTLLPGLQDEVMNIKPV.Q	2
*	PARC_cac1_02092005-04.01196.01196.1	1.9275	0.2468	1113.7	1114.33	7	330.9	50.0%	1	R.GSGIVASPAVKK.L	1
*	PARC_cac1_02092005-02.03198.03198.2	3.8608	0.4324	2559.93	2558.847	1	562.5	40.9%	1	N.LWAEQPLPVSPLDIYSDEASAQK.K	2

U	ORFP:YBR181C	5	6	28.0%	236	26996	10.4	RPS6B SGDID:S0000385, Chr II from 592729-592724,592371-591667, reverse complement
U	ORFP:YPL090C	5	6	28.0%	236	26996	10.4	RPS6A SGDID:S0006011, Chr XVI from 378390-378385,377990-377286, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01199.01199.1	1.8886	0.089	1161.41	1162.201	15	236.4	50.0%	1	K.TFEIDDEHR.I	1
PARC_cac1_02092005-02.01355.01355.2	4.8613	0.4472	1749.23	1749.875	1	1654.1	73.3%	1	K.RIGQEVDGEAVGDEFK.G	2
PARC_cac1_02092005-03.01354.01354.1	1.8817	0.1106	883.61	884.067	2	98.4	71.4%	1	K.QGVLLPTR.I	1
PARC_cac1_02092005-07.03870.03870.2	5.6814	0.497	1648.27	1649.07	1	2023.9	81.2%	2	R.GAIVGPDLAVLALVIVK.K	2
PARC_cac1_02092005-02.01370.01370.2	3.9102	0.3625	1745.37	1745.924	1	851.9	70.0%	1	K.KGEQELEGLTDTTVPK.R	2

ORFP:YNL055C

27.6%

283

30428

7.9

POR1 SGDID:S0005000, Chr XIV from 518841-517990, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01654.01654.2	3.4542	0.3882	2063.61	2062.247	1	494.0	41.7%	1	K.QTGLGLTQGWSNTNNLQTK.L	2
*	PARC_cac1_02092005-02.01982.01982.1	2.4729	0.2729	1203.78	1203.424	5	377.0	55.0%	1	K.LEFANLTPGLK.N	1
*	PARC_cac1_02092005-02.01682.01682.1	2.5631	0.3314	1342.47	1343.563	1	572.7	66.7%	1	K.NELITSLTPGVAK.S	1
*	PARC_cac1_02092005-03.02850.02850.2	4.0832	0.5822	1802.31	1802.04	1	466.7	46.7%	1	K.SAVLNTTFTQPFFTAR.G	2
*	PARC_cac1_02092005-05.02760.02760.2	2.983	0.4352	1957.15	1959.296	43	204.7	33.3%	1	K.QLLRPGVTLGVGSSFDALK.L	2

U	ORFP:YFR031C-A	4	8	27.6%	254	27408	11.1	RPL2A SGDID:S0002104, Chr VI from 221406-221403,221255-220495, reverse complement
U	ORFP:YIL018W	4	8	27.6%	254	27408	11.1	RPL2B SGDID:S0001280, Chr IX from 316766-316769,317170-317930

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.02660.02660.2	4.0513	0.4356	2237.69	2237.52	1	1028.4	52.8%	1	R.LREEIFIANEGVHTGQFIY.A	2
PARC_cac1_02092005-05.02570.02570.2	4.6913	0.5121	2495.45	2493.825	1	1464.7	52.4%	5	R.LREEIFIANEGVHTGQFIYAGK.K	2
PARC_cac1_02092005-03.02614.02614.3	6.2026	0.4524	3176.72	3177.582	1	1855.0	35.8%	1	K.KASLNVGNVLPLGSVPEGTIVSNVEEKPGDR.G	3
PARC_cac1_02092005-03.01558.01558.2	4.6517	0.3285	1841.95	1842.018	1	1400.4	59.4%	1	R.ASGNYVIIIGHNPDENK.T	2

U	ORFP:YGR118W	3	3	27.6%	145	16038	10.7	RPS23A SGDID:S0003350, Chr VII from 726975-727039,727360-727732
U	ORFP:YPR132W	3	3	27.6%	145	16038	10.7	RPS23B SGDID:S0006336, Chr XVI from 794959-795023,795389-795761

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-04.01162.01162.1	2.0098	0.2713	1061.52	1062.127	1	332.8	50.0%	1	K.SSPFGGSSHAK.G	1
PARC_cac1_02092005-05.03788.03788.3	5.5223	0.4491	3097.28	3098.405	1	2075.9	34.3%	1	K.KVTAFVPNDGCLNFVDENDEVLLAGFGR.K	3
PARC_cac1_02092005-03.03264.03264.3	3.7881	0.3295	3226.46	3226.579	1	733.8	27.7%	1	K.KVTAFVPNDGCLNFVDENDEVLLAGFGRK.G	3

U	ORFP:YGR027C	3	3	26.9%	108	12039	10.3	RPS25A SGDID:S0003259, Chr VII from 534459-534133, reverse complement
U	ORFP:YLR333C	3	3	26.9%	108	12009	10.3	RPS25B SGDID:S0004325, Chr XII from 795899-795573, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.00942.00942.1	2.8307	0.2232	729.6	729.855	1	1073.4	75.0%	1	K.AAAALAGGK.K	1
PARC_cac1_02092005-03.01202.01202.1	3.4235	0.3325	1251.59	1252.413	5	1050.4	65.0%	1	R.AQHAVILDQEK.Y	1
PARC_cac1_02092005-03.01262.01262.1	1.8687	0.2138	984.44	985.212	19	161.2	56.2%	1	K.EGIIKPISK.H	1

ORFP:YAL038W

25.8%

500

54545

7.7

CDC19 SGDID:S0000036, Chr I from 71788-73290

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.01772.01772.2	3.1621	0.2684	1472.55	1473.712	1	594.5	62.5%	1	R.KSEELYPGRPLAI.A	2
*	PARC_cac1_02092005-03.02010.02010.2	4.3298	0.4416	2001.49	2002.318	1	891.0	55.9%	1	R.KSEELYPGRPLAIALDTK.G	2
*	PARC_cac1_02092005-02.01336.01336.1	1.9971	0.2017	931.36	932.122	4	590.5	75.0%	1	K.IMYVDYK.N	1
*	PARC_cac1_02092005-02.02318.02318.2	4.8947	0.4623	1725.11	1725.937	1	909.2	71.9%	1	K.GVNLPGTDVDLPALSEK.D	2
*	PARC_cac1_02092005-02.01826.01826.2	5.1017	0.377	1761.71	1761.929	1	1616.1	78.6%	1	K.IENQQGVNNFDEILK.V	2
*	PARC_cac1_02092005-03.02862.02862.2	5.5737	0.5646	2608.91	2609.859	1	2157.3	54.2%	2	R.NCTPKPTSTTETVAASAVAAVFEQK.A	2
*	PARC_cac1_02092005-05.02026.02026.2	3.6528	0.3555	1502.71	1502.766	1	585.0	68.2%	1	K.YRPNCPIILVTR.C	2
*	PARC_cac1_02092005-03.03098.03098.1	2.139	0.1418	1071.22	1070.276	2	388.4	62.5%	1	R.GVFPFVFEK.E	1
*	PARC_cac1_02092005-03.01540.01540.1	2.5198	0.4083	1342.72	1343.522	1	491.7	59.1%	1	K.KGDTYVSIQGFK.A	1
*	PARC_cac1_02092005-02.01214.01214.1	2.8003	0.2934	1341.51	1342.451	7	306.3	46.2%	2	K.AGAGHSNTLQVSTV.-	1

U	ORFP:YDR471W	5	8	25.7%	136	15505	10.4	RPL27B SGDID:S0002879, Chr IV from 1401758-1401788,1402173-1402552
U	ORFP:YHR010W	5	8	25.7%	136	15531	10.4	RPL27A SGDID:S0001052, Chr VIII from 126513-126543,127105-127484

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-04.00958.00958.2	3.5048	0.3975	1309.07	1308.52	1	1072.3	77.3%	1	K.VVIVKPHDEGSK.S	2
PARC_cac1_02092005-05.01803.01803.1	1.9108	0.2405	964.48	965.1	2	388.7	62.5%	1	K.SHPFGHALV.A	1
PARC_cac1_02092005-05.02012.02012.1	3.0933	0.416	1490.74	1491.693	1	803.8	61.5%	3	K.SHPFGHALVAGIER.Y	1
PARC_cac1_02092005-05.01986.01986.2	4.1763	0.5889	1491.15	1491.693	1	1027.3	84.6%	2	K.SHPFGHALVAGIER.Y	2
PARC_cac1_02092005-02.01814.01814.1	2.2458	0.2388	1085.52	1086.23	1	820.4	68.8%	1	R.YTLDVEAFK.S	1

ORFP:YLR075W

25.3%

221

25361

10.0

RPL10 SGDID:S0004065, Chr XII from 282928-283593

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.04128.04128.3	4.5275	0.4635	3228.56	3229.534	1	960.0	25.9%	1	K.ATVDEFPLCVHLVSNELEQLSSEALEAAR.I	3
*	PARC_cac1_02092005-05.02408.02408.2	3.6488	0.3781	1768.27	1768.025	1	687.3	57.7%	1	K.KWGFTNLDRPEYLK.K	2
*	PARC_cac1_02092005-02.01155.01155.1	2.4602	0.3883	1364.65	1365.483	1	277.4	58.3%	1	R.EAGEVKDDGAFVK.F	1

ORFP:YCL028W

24.9%

405

42580

6.6

RNQ1 SGDID:S0000533, Chr III from 70150-71367

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.01418.01418.2	3.84	0.5062	2125.09	2126.29	1	1265.8	52.6%	1	K.LISEAESHFSQGNHAEAVAK.L	2
*	PARC_cac1_02092005-02.02350.02350.2	5.5652	0.4809	2506.01	2506.744	1	909.4	54.5%	1	K.LTSAAQSNPNDEQMSTIESLIQK.I	2
*	PARC_cac1_02092005-02.01218.01218.1	1.9114	0.1547	1038.41	1039.194	3	415.9	75.0%	1	K.IAGYVMDNR.S	1
*	PARC_cac1_02092005-04.02086.02086.2	3.8881	0.47	1487.33	1486.77	1	764.1	57.7%	1	K.LALLATVMTHSSNK.G	2
*	PARC_cac1_02092005-04.04352.04352.3	4.8865	0.3675	3344.78	3342.781	1	1698.6	27.9%	1	R.GFDVGTVMSMLSGSGGGSQSMGASGLAALASQFFK.S	3

ORFP:YNL178W

24.6%

240

26503

9.4

RPS3 SGDID:S0005122, Chr XIV from 302677-303399

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.02298.02298.2	2.6182	0.2128	1512.05	1513.718	34	272.2	46.2%	1	Y.GVVRYVMESGAKGC.E	2
*	PARC_cac1_02092005-02.02871.02871.2	4.3904	0.4516	2425.49	2422.659	1	589.2	40.5%	1	K.FADGFLIHSGQPVNDFIDTATR.H	2
*	PARC_cac1_02092005-02.02428.02428.2	3.835	0.3236	2458.97	2460.871	1	793.7	47.7%	1	K.ALPDAVTIIEPKEEEPILAPSVK.D	2

ORFP:YOL086C

24.4%

348

36849

6.7

ADH1 SGDID:S0005446, Chr XV from 160593-159547, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.01574.01574.1	1.8078	0.1483	1021.6	1022.276	7	349.0	56.2%	1	Y.KDIPVPKPK.A	1 1
	PARC_cac1_02092005-04.01416.01416.1	1.8065	0.1526	1135.42	1135.308	135	374.2	54.5%	1	V.KLPLVGGHEGAG.V	1 1
*	PARC_cac1_02092005-04.03144.03144.2	3.0941	0.2796	2339.91	2339.674	1	673.0	37.5%	1	K.SANLMAGHWVAISGAAGGLGSLAVQ.Y	2
*	PARC_cac1_02092005-07.03074.03074.2	4.2408	0.4782	2700.93	2702.103	1	1185.8	37.0%	1	K.SANLMAGHWVAISGAAGGLGSLAVQYAK.A	2
*2	PARC_cac1_02092005-03.02698.02698.1	2.4228	0.2546	1313.65	1313.493	24	396.8	45.5%	1	R.SIGGEVFIDFTK.E	1 1
*	PARC_cac1_02092005-03.02026.02026.2	4.2104	0.2197	2314.03	2313.486	2	675.1	37.0%	2	K.ATDGGAHGVINVSVSEAAIEASTR.Y	2

Similarities: ORFP:YMR303C(3:3)

ORFP:YLR029C

24.0%

204

24422

11.4

RPL15A SGDID:S0004019, Chr XII from 202591-201977, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01254.01254.1	2.1618	0.1105	950.42	951.067	9	338.1	75.0%	1	K.YLEELQR.K	1
	PARC_cac1_02092005-03.01204.01204.2	3.925	0.457	1676.29	1677.855	1	495.1	63.3%	1	K.GATYGKPTNQGVNELK.Y	2 2
	PARC_cac1_02092005-02.01571.01571.2	3.1783	0.3384	1720.45	1717.875	1	519.6	57.7%	1	R.VLNSYWVNQDSTYK.Y	2 2
	PARC_cac1_02092005-05.02510.02510.1	2.8794	0.3433	1488.45	1488.726	1	577.3	63.6%	1	K.YFEVILVDPQHK.A	1 1
	PARC_cac1_02092005-04.02170.02170.2	4.219	0.4028	1489.15	1488.726	1	1651.3	81.8%	2	K.YFEVILVDPQHK.A	2 2

Similarities: ORFP:YMR121C(4:1)

U	ORFP:YBR048W	3	3	23.7%	156	17749	10.8	RPS11B SGDID:S0000252, Chr II from 332790-332834,333346-333771
U	ORFP:YDR025W	3	3	23.7%	156	17749	10.8	RPS11A SGDID:S0002432, Chr IV from 491510-491554,491894-492319

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-05.01659.01659.1	2.0358	0.1238	1094.55	1095.246	12	115.4	62.5%	1	K.QPHIFNNPK.V	1
PARC_cac1_02092005-05.01782.01782.1	2.4147	0.18	1222.58	1223.42	3	185.9	55.0%	1	K.NVPVHVSPAFR.V	1
PARC_cac1_02092005-03.01606.01606.2	4.1955	0.4513	1856.33	1857.127	1	864.2	56.2%	1	R.VQVGDIVTVGQCRPISK.T	2

U	ORFP:YBR010W	3	6	23.5%	136	15356	11.4	HHT1 SGDID:S0000214, Chr II from 256288-256698
U	ORFP:YNL031C	3	6	23.5%	136	15356	11.4	HHT2 SGDID:S0004976, Chr XIV from 576046-575636, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-04.00356.00356.3	4.5068	0.4334	3225.08	3225.579	1	538.4	26.7%	2	R.FQSSAIGALQESVEAYLVSLFEDTNLAAIH.A	3
PARC_cac1_02092005-04.00112.00112.3	5.323	0.4727	3424.4	3424.832	1	1091.1	30.6%	3	R.FQSSAIGALQESVEAYLVSLFEDTNLAAIHAK.R	3
PARC_cac1_02092005-04.04240.04240.3	5.985	0.499	2974.61	2975.368	1	1196.8	30.6%	1	S.AIGALQESVEAYLVSLFEDTNLAAIHAK.R	3

ORFP:YLR044C

23.3%

563

61495

6.2

PDC1 SGDID:S0004034, Chr XII from 234082-232391, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01630.01630.2	5.1395	0.5761	1998.01	1999.106	1	1879.1	63.9%	2	R.WAGNANELNAAYAADGYAR.I	2 2
*	PARC_cac1_02092005-04.03058.03058.2	3.8078	0.2682	2744.57	2744.207	1	591.4	43.8%	1	R.TTYVTQRPVYLGLPANLVDLNVPAK.L	2
*	PARC_cac1_02092005-04.03052.03052.2	4.1354	0.2876	2543.01	2541.996	1	607.0	43.2%	1	T.YVTQRPVYLGLPANLVDLNVPAK.L	2
	PARC_cac1_02092005-04.03060.03060.1	2.4838	0.2108	1251.72	1251.469	1	457.7	59.1%	1	L.PANLVDLNVPAK.L	1 1
*	PARC_cac1_02092005-02.01700.01700.2	4.9345	0.5368	2129.01	2130.418	1	726.5	52.8%	1	K.LLQTPIDMSLKPNDAESEK.E	2
*	PARC_cac1_02092005-04.03223.03223.2	5.4922	0.5209	1906.83	1907.321	1	2323.9	75.0%	1	K.KLIDLTQFPAFVTPMGK.G	2
	PARC_cac1_02092005-03.01475.01475.1	2.4662	0.3143	1092.59	1093.286	1	357.0	61.1%	1	R.NATFPGVQMK.F	1 1
*	PARC_cac1_02092005-03.03286.03286.2	4.3936	0.3898	2388.45	2389.673	1	969.2	52.5%	1	K.AQYNEIQGWDHLSLLPTFGAK.D	2
*	PARC_cac1_02092005-02.03635.03635.2	4.814	0.2686	2290.47	2287.738	1	866.3	57.9%	1	R.MIEIMLPVFDAPQNLVEQAK.L	2

Similarities: ORFP:YLR134W(3:6)

ORFP:YOR204W

23.2%

604

65553

7.8

DED1 SGDID:S0005730, Chr XV from 722911-724725

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.03714.03714.2	4.8046	0.5584	2538.81	2538.898	1	676.1	52.3%	1	K.DVPEPITEFTSPPLDGLLLENIK.L	2
*	PARC_cac1_02092005-02.03710.03710.1	2.6983	0.2296	1322.39	1322.588	2	371.5	59.1%	1	S.PPLDGLLLENIK.L	1
*	PARC_cac1_02092005-02.03447.03447.2	3.3161	0.169	1531.09	1529.776	1	640.0	65.4%	1	K.TGGFLFPVLSESFK.T	2
*	PARC_cac1_02092005-02.01750.01750.1	2.5643	0.3295	1264.56	1265.406	1	243.2	60.0%	1	R.ELATQIFDEAK.K	1
	PARC_cac1_02092005-02.02027.02027.1	2.2242	0.2057	1336.62	1337.595	5	229.6	55.0%	1	R.MLDMGFEPQIR.H	1
*	PARC_cac1_02092005-04.02958.02958.2	3.8835	0.5191	2047.77	2048.367	1	855.1	52.9%	1	R.QTLMFSATFPADIQHLAR.D	2
*	PARC_cac1_02092005-02.03058.03058.3	4.9993	0.4294	2868.62	2868.132	1	649.7	31.2%	1	R.GLDIPNVTHVINYDLPSDVDDYVHR.I	3
*	PARC_cac1_02092005-02.02292.02292.2	4.7306	0.4916	2057.31	2056.24	1	1306.5	57.9%	1	R.AGNTGLATAFFNSENSNIVK.G	2
*	PARC_cac1_02092005-03.03235.03235.2	3.291	0.466	2024.99	2026.297	1	1196.0	58.8%	2	K.GLHEILTEANQEVPSFLK.D	2

U	ORFP:YCR031C	2	2	21.9%	137	14537	10.7	RPS14A SGDID:S0000627, Chr III from 178212-178206,177898-177492, reverse complement
U	ORFP:YJL191W	2	2	21.7%	138	14650	10.5	RPS14B SGDID:S0003727, Chr X from 73786-73795,74204-74610

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.02679.02679.2	3.1642	0.3434	2170.13	2171.417	1	596.6	41.7%	1	A.RIYASFNDTFVHVTDLSGK.E	2
	PARC_cac1_02092005-03.01135.01135.2	2.8578	0.4114	1024.59	1025.153	1	795.6	75.0%	1	K.TPGPGGQAALR.A	2

ORFP:YPR018W

21.3%

606

70210

6.7

RLF2 SGDID:S0006222, Chr XVI from 594471-596291

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01955.01955.2	4.6572	0.42	2303.41	2302.599	1	522.0	50.0%	1	K.DVITLDDPKEDVSGPMIETVK.Q	2
*	PARC_cac1_02092005-02.01082.01082.1	1.9104	0.2323	1188.59	1189.308	1	446.5	60.0%	1	K.LSDSNTPVVEK.S	1
*	PARC_cac1_02092005-03.01462.01462.2	3.1458	0.3477	1333.43	1331.512	1	1192.8	75.0%	1	K.RKIDDELLNSK.D	2
*	PARC_cac1_02092005-02.01779.01779.1	2.6809	0.3113	1241.39	1242.519	6	553.4	60.0%	1	K.AVDVLQQMPLK.E	1
*	PARC_cac1_02092005-03.02626.02626.2	3.4269	0.2123	1604.45	1603.817	1	750.4	70.8%	1	K.FYENVRPPFIGTY.S	2
*	PARC_cac1_02092005-02.01819.01819.1	2.0858	0.184	1292.99	1293.465	3	199.8	55.0%	1	Y.ENVRPPFIGTY.S	1
*	PARC_cac1_02092005-04.02906.02906.1	2.4095	0.3368	1357.6	1358.673	1	522.6	63.6%	2	K.FVGPLIPTICLK.S	1
*	PARC_cac1_02092005-02.01187.01187.1	2.5303	0.2597	1310.45	1311.348	1	479.6	65.0%	1	K.SNFENLSEENK.R	1
*	PARC_cac1_02092005-02.02076.02076.2	4.9464	0.4543	1998.61	1999.268	1	1068.7	61.8%	3	K.AEVIIETDGPIDPFKEPK.T	2
*	PARC_cac1_02092005-02.03044.03044.2	5.5829	0.5619	2257.61	2257.502	1	1956.0	67.5%	3	R.LFDGVQDSTFSLGTVTEIAQK.N	2

NRL_1MCOH

20.8%

428

46852

8.9

owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H...

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.03451.03451.2	3.2033	0.2961	2592.83	2593.899	1	564.4	35.4%	1	S.WNSGALTSGVHTFPAVLQSSGLYSL.S	2
*	PARC_cac1_02092005-05.01978.01978.2	2.6768	0.3051	3007.01	3007.293	6	172.9	20.4%	1	L.SSVVTVPSSSLGTQTYICNVNHKPSNTK.V	2
*	PARC_cac1_02092005-03.01931.01931.2	2.6714	0.1078	1677.47	1677.859	1	1314.7	69.2%	1	K.FNWYVDGVQVHNAK.T	2
*	PARC_cac1_02092005-02.02547.02547.2	4.463	0.345	2546.15	2545.681	1	1243.5	50.0%	2	K.GFYPSDIAVEWESNGQPENNYK.T	2

ORFP:YMR121C

20.6%

204

24422

11.4

RPL15B SGDID:S0004728, Chr XIII from 510347-509733, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.01204.01204.2	3.925	0.457	1676.29	1677.855	1	495.1	63.3%	1	K.GATYGKPTNQGVNELK.Y	2 2
PARC_cac1_02092005-02.01571.01571.2	3.1783	0.3384	1720.45	1717.875	1	519.6	57.7%	1	R.VLNSYWVNQDSTYK.Y	2 2
PARC_cac1_02092005-05.02510.02510.1	2.8794	0.3433	1488.45	1488.726	1	577.3	63.6%	1	K.YFEVILVDPQHK.A	1 1
PARC_cac1_02092005-04.02170.02170.2	4.219	0.4028	1489.15	1488.726	1	1651.3	81.8%	2	K.YFEVILVDPQHK.A	2 2

Similarities: ORFP:YLR029C(4:0)

gi|7463016|pir||S77957

20.1%

269

27961

6.7

lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.01402.01402.1	1.9405	0.1937	1273.79	1274.42	117	75.4	37.5%	1	D.GSLAQSQTGAVVR.A	1
*	PARC_cac1_02092005-03.04055.04055.3	5.0013	0.4733	3315.29	3315.626	1	1017.5	25.0%	1	R.ATNAASDFTLLELNTAANPAYNLFWAGWDR.R	3
*	PARC_cac1_02092005-04.03818.03818.3	5.5635	0.3838	3472.01	3471.813	1	1402.6	29.2%	3	R.ATNAASDFTLLELNTAANPAYNLFWAGWDRR.D	3
*	PARC_cac1_02092005-05.01500.01500.1	2.2196	0.3234	1115.64	1116.265	1	571.6	72.2%	1	T.AIHHPNVAEK.R	1

ORFP:YOR063W

19.9%

387

43758

10.3

RPL3 SGDID:S0005589, Chr XV from 444687-445850

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02562.02562.1	2.8399	0.4662	1410.52	1411.684	1	702.1	62.5%	1	R.SKPVALTSFLGYK.A	1
*	PARC_cac1_02092005-05.01862.01862.2	4.8263	0.4222	1797.85	1796.034	1	1426.7	65.6%	1	K.KAHLAEIQLNGGSISEK.V	2
*	PARC_cac1_02092005-07.02947.02947.2	4.6057	0.4529	2282.61	2281.583	1	836.1	47.5%	1	K.TVAVDSVFEQNEMIDAIAVTK.G	2
*	PARC_cac1_02092005-05.01606.01606.1	2.0613	0.2538	1096.5	1097.178	1	355.4	55.6%	1	K.GHGFEGVTHR.W	1
*	PARC_cac1_02092005-02.01259.01259.1	1.8914	0.1797	888.36	889.037	3	646.2	78.6%	1	K.ALEEVSLK.W	1
*	PARC_cac1_02092005-05.01723.01723.1	2.0506	0.217	905.64	905.103	2	373.3	64.3%	1	K.HAFMGTLK.K	1

ORFP:YJR009C

19.9%

332

35847

7.0

TDH2 SGDID:S0003769, Chr X from 454374-453376, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.02635.02635.2	3.2285	0.3544	1680.95	1680.074	1	1312.0	66.7%	1	K.KVVITAPSSTAPMFVM.G	2 2
PARC_cac1_02092005-03.02251.02251.2	5.4867	0.5657	2335.27	2336.767	1	815.7	52.4%	1	K.KVVITAPSSTAPMFVMGVNEEK.Y	2 2
PARC_cac1_02092005-03.02248.02248.3	3.736	0.3573	2337.05	2336.767	1	986.1	31.0%	1	K.KVVITAPSSTAPMFVMGVNEEK.Y	3 3
PARC_cac1_02092005-03.02547.02547.2	2.8477	0.3053	2210.69	2208.593	1	286.6	32.5%	1	K.VVITAPSSTAPMFVMGVNEEK.Y	2 2
PARC_cac1_02092005-02.01166.01166.1	3.0003	0.4348	1375.58	1375.522	1	503.5	57.1%	1	R.TASGNIIPSSTGAAK.A	1 1 1
PARC_cac1_02092005-02.01172.01172.2	2.6138	0.1456	1375.65	1375.522	14	276.6	46.4%	1	R.TASGNIIPSSTGAAK.A	2 2 2
PARC_cac1_02092005-04.02155.02155.2	4.3871	0.4417	1627.87	1627.922	1	1386.6	75.0%	2	F.RVPTVDVSVVDLTVK.L	2 2 2
PARC_cac1_02092005-05.02643.02643.1	2.7918	0.2636	1470.85	1471.734	1	521.7	53.8%	3	R.VPTVDVSVVDLTVK.L	1 1 1
PARC_cac1_02092005-07.02346.02346.2	4.2959	0.4552	1471.85	1471.734	1	1707.8	80.8%	5	R.VPTVDVSVVDLTVK.L	2 2 2
PARC_cac1_02092005-02.01771.01771.2	3.9549	0.4552	1753.39	1753.865	1	852.7	61.5%	4	K.LVSWYDNEYGYSTR.V	2 2

Similarities: ORFP:YGR192C(10:0)
ORFP:YJL052W(5:5)

U	ORFP:YHR203C	3	4	19.5%	261	29410	10.1	RPS4B SGDID:S0001246, Chr VIII from 505526-505513,505243-504472, reverse complement
U	ORFP:YJR145C	3	4	19.5%	261	29410	10.1	RPS4A SGDID:S0003906, Chr X from 702763-702750,702493-701722, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.03495.03495.2	3.4358	0.3968	2596.53	2593.824	1	455.8	40.9%	1	R.TDTTYPAGFMDVITLDATNENFR.L	2
PARC_cac1_02092005-02.01002.01002.1	2.1219	0.1815	1055.38	1056.114	7	521.7	68.8%	1	R.ITDEEASYK.L	1
PARC_cac1_02092005-04.02603.02603.2	5.1785	0.42	2119.77	2117.496	1	1308.5	63.9%	2	R.LNNVFVIGEQGKPYISLPK.G	2

ORFP:YGL103W

19.5%

149

16722

10.6

RPL28 SGDID:S0003071, Chr VII from 310968-311016,311528-311928

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02290.02290.2	2.6586	0.2745	1724.85	1725.003	1	527.2	61.5%	1	K.QQAHFWKPVLNLDK.L	2
*	PARC_cac1_02092005-02.02127.02127.1	1.8427	0.2135	1114.67	1115.315	9	373.1	62.5%	1	K.LWTLIPEDK.R	1
*	PARC_cac1_02092005-03.02206.02206.2	3.0104	0.1517	1919.47	1919.231	2	338.1	50.0%	1	K.LWTLIPEDKRDQYLK.S	2

U	ORFP:YDL082W	2	2	18.6%	199	22554	11.2	RPL13A SGDID:S0002240, Chr IV from 308423-308426,308792-309387
U	ORFP:YMR142C	2	2	18.6%	199	22525	11.1	RPL13B SGDID:S0004750, Chr XIII from 551206-551203,550800-550205, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01296.01296.1	2.1897	0.3495	1333.55	1334.431	1	168.6	60.0%	1	R.NQEIFDANVQR.L	1
	PARC_cac1_02092005-02.02923.02923.2	4.3655	0.5164	2653.99	2654.937	1	585.0	38.0%	1	K.APEAEQVLSAAATFPIAQPATDVEAR.A	2

U	ORFP:YDL083C	2	2	18.2%	143	15847	10.3	RPS16B SGDID:S0002241, Chr IV from 307788-307765,307332-306925, reverse complement
U	ORFP:YMR143W	2	2	18.2%	143	15847	10.3	RPS16A SGDID:S0004751, Chr XIII from 551927-551950,552495-552902

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.02035.02035.2	3.3776	0.1236	1433.55	1434.765	2	968.2	68.2%	1	L.RFKVYEPLLLVG.L	2
	PARC_cac1_02092005-04.01391.01391.2	3.3757	0.3979	1445.59	1444.633	1	1005.6	69.2%	1	R.VTGGGHVSQVYAIR.Q	2

U	ORFP:YDL136W	2	2	16.7%	120	13910	10.6	RPL35B SGDID:S0002295, Chr IV from 217600-217602,218008-218367
U	ORFP:YDL191W	2	2	16.7%	120	13910	10.6	RPL35A SGDID:S0002350, Chr IV from 117665-117667,118159-118518

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01666.01666.1	2.5441	0.2561	1243.36	1244.431	19	237.9	50.0%	1	K.EQLASQLVDLK.K	1
	PARC_cac1_02092005-02.01114.01114.1	2.0492	0.1437	1038.37	1039.13	2	535.8	62.5%	1	K.FEASQVTEK.Q	1

ORFP:YJL052W

16.6%

332

35750

8.3

TDH1 SGDID:S0003588, Chr X from 337967-338965

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01166.01166.1	3.0003	0.4348	1375.58	1375.522	1	503.5	57.1%	1	R.TASGNIIPSSTGAAK.A	1 1 1
	PARC_cac1_02092005-02.01172.01172.2	2.6138	0.1456	1375.65	1375.522	14	276.6	46.4%	1	R.TASGNIIPSSTGAAK.A	2 2 2
	PARC_cac1_02092005-04.02155.02155.2	4.3871	0.4417	1627.87	1627.922	1	1386.6	75.0%	2	F.RVPTVDVSVVDLTVK.L	2 2 2
	PARC_cac1_02092005-05.02643.02643.1	2.7918	0.2636	1470.85	1471.734	1	521.7	53.8%	3	R.VPTVDVSVVDLTVK.L	1 1 1
	PARC_cac1_02092005-07.02346.02346.2	4.2959	0.4552	1471.85	1471.734	1	1707.8	80.8%	5	R.VPTVDVSVVDLTVK.L	2 2 2
*	PARC_cac1_02092005-02.04326.04326.2	2.6592	0.0845	2538.35	2537.742	337	173.1	20.8%	1	E.DAVVSSDFLGDTHASIFDASAGIQL.S	2

Similarities: ORFP:YGR192C(5:1)
ORFP:YJR009C(5:1)

KERATIN21

16.5%

357

39219

5.2

no description

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01094.01094.1	2.7388	0.1571	1152.48	1153.234	10	454.5	75.0%	1	K.NKYEDEINK.R	1 1 1 1
PARC_cac1_02092005-03.00822.00822.2	3.2835	0.197	1309.23	1309.422	1	900.0	77.8%	1	K.NKYEDEINKR.T	2 2 2 2
PARC_cac1_02092005-03.00864.00864.1	2.6112	0.2073	1310.55	1309.422	1	284.6	61.1%	2	K.NKYEDEINKR.T	1 1 1 1
PARC_cac1_02092005-02.03082.03082.1	3.4285	0.2609	1329.42	1330.521	1	696.9	72.7%	4	R.NLDLDSIIAEVK.A	1 1 1 1
PARC_cac1_02092005-02.01130.01130.1	1.9669	0.256	1107.57	1108.196	19	380.1	56.2%	1	K.AQYEEIAQR.S	1 1 1 1
PARC_cac1_02092005-03.02291.02291.1	2.0081	0.1886	1263.98	1264.464	13	243.1	45.0%	1	K.LALDVEIATYR.K	1 1 1 1 1
PARC_cac1_02092005-02.00960.00960.2	2.598	0.1348	1531.77	1532.61	5	518.1	46.9%	1	S.YGSGLGVGGGFSSSSGR.A	2 2

Similarities: KERATIN13(3:4)
KERATIN22(3:4)
KERATIN18(4:3)
KERATIN17(5:2)
KERATIN20(3:4)
KERATIN15(1:6)
KERATIN16(1:6)

U	ORFP:YDR447C	3	3	16.2%	136	15803	10.5	RPS17B SGDID:S0002855, Chr IV from 1355541-1355539,1355224-1354817, reverse complement
U	ORFP:YML024W	3	3	16.2%	136	15788	10.5	RPS17A SGDID:S0004486, Chr XIII from 225889-225891,226290-226697

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-04.01406.01406.2	2.6934	0.1775	1134.01	1135.367	1	1010.0	77.8%	1	K.IAGYTTHLMK.R	2
PARC_cac1_02092005-03.01867.01867.1	2.4953	0.1498	1296.61	1297.541	41	144.9	50.0%	1	K.LPLSVINVSAQR.D	1
PARC_cac1_02092005-03.01874.01874.2	3.7724	0.4646	1297.67	1297.541	1	1617.4	86.4%	1	K.LPLSVINVSAQR.D	2

ORFP:YJR077C

16.1%

311

32812

9.3

MIR1 SGDID:S0003838, Chr X from 577884-576949, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-07.04500.04500.3	4.4463	0.4079	3331.64	3329.857	1	717.8	24.2%	1	K.LSSTSTTLLNLLSGLTAGLAAAIVSQPADTLLSK.V	3
*	PARC_cac1_02092005-05.02486.02486.1	2.6902	0.2854	1581.64	1582.884	1	463.4	46.7%	1	K.KAPGQSTVGLLAQLAK.Q	1

ORFP:YJL115W

15.4%

279

31603

4.0

ASF1 SGDID:S0003651, Chr X from 195986-196825

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02388.02388.2	4.8205	0.3755	2333.85	2332.616	1	1113.3	54.8%	1	R.SLDHDQELDSILVGPVPVGVNK.F	2
*	PARC_cac1_02092005-02.01388.01388.2	3.3497	0.3041	2530.03	2529.679	1	552.7	37.5%	1	R.VGYYVNNEYDEEELRENPPAK.V	2

U	ORFP:YJL177W	3	3	14.7%	184	20551	10.9	RPL17B SGDID:S0003713, Chr X from 90783-91091,91409-91654
U	ORFP:YKL180W	3	3	14.7%	184	20549	10.9	RPL17A SGDID:S0001663, Chr XI from 109270-109578,109885-110130

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01690.01690.2	5.6611	0.4101	1645.41	1645.856	1	2643.5	83.3%	1	K.FVQGLLQNAAANAEAK.G	2
PARC_cac1_02092005-04.01199.01199.1	2.6933	0.2353	1220.67	1221.402	5	317.8	55.0%	1	Y.VSHIQVNQAPK.Q	1
PARC_cac1_02092005-04.01150.01150.1	1.8637	0.1757	1034.71	1035.191	8	278.9	62.5%	1	S.HIQVNQAPK.Q	1

ORFP:YDL014W

14.4%

327

34465

10.2

NOP1 SGDID:S0002172, Chr IV from 427360-428343

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02819.02819.3	3.5838	0.0807	3327.65	3325.665	1	503.1	21.1%	1	Y.LGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGR.E	3
*	PARC_cac1_02092005-03.02091.02091.2	4.2815	0.3149	1730.49	1730.014	1	1686.3	76.9%	1	R.IKPLEQLTLEPYER.D	2

ORFP:YOR096W

14.2%

190

21622

9.8

RPS7A SGDID:S0005622, Chr XV from 505794-505937,506339-506767

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.03491.03491.2	3.193	0.2656	1667.45	1668.035	5	325.1	53.3%	1	K.ALAIFVPVPSLAGFHK.V	2
*	PARC_cac1_02092005-02.01896.01896.1	2.052	0.2086	1299.3	1300.454	2	119.7	55.0%	1	K.QIVFEIPSETH.-	1

U	ORFP:YGL076C	2	2	13.9%	244	27638	10.1	RPL7A SGDID:S0003044, Chr VII from 365997-365987,365527-365434,364965-364336, reverse complement
U	ORFP:YPL198W	2	2	13.9%	244	27696	10.1	RPL7B SGDID:S0006119, Chr XVI from 173151-173161,173571-173664,174072-174701

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-03.01791.01791.2	4.945	0.3936	1838.73	1839.102	1	976.2	65.6%	1	K.QRVPLSDNAIIEANLGK.Y	2
	PARC_cac1_02092005-05.01951.01951.2	4.1559	0.4096	1981.95	1981.178	1	760.7	46.9%	1	K.HFIQGGSFGNREEFINK.L	2

ORFP:YLR340W

13.8%

312

33717

4.8

RPP0 SGDID:S0004332, Chr XII from 805887-806825

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02058.02058.2	5.3082	0.4581	2131.77	2132.399	1	2063.9	69.4%	1	K.SLFVVGVDNVSSQQMHEVR.K	2
*	PARC_cac1_02092005-04.01991.01991.2	3.0208	0.1824	2261.85	2260.573	1	541.4	39.5%	1	K.SLFVVGVDNVSSQQMHEVRK.E	2
*	PARC_cac1_02092005-02.02714.02714.1	2.8341	0.3115	1267.42	1268.409	1	698.3	65.0%	1	R.GFLSDLPDFEK.L	1
*	PARC_cac1_02092005-02.01735.01735.1	2.585	0.2059	1283.58	1284.458	1	472.1	59.1%	1	R.AGAVAPEDIWVR.A	1

U	ORFP:YBL027W	2	2	13.8%	189	21704	11.4	RPL19B SGDID:S0000123, Chr II from 168385-168386,168771-169338
U	ORFP:YBR084C-A	2	2	13.8%	189	21704	11.4	RPL19A SGDID:S0002156, Chr II from 415217-415216,414709-414142, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01716.01716.2	5.8309	0.5133	1930.97	1931.069	1	2191.6	81.2%	1	K.VWLDPNETSEIAQANSR.N	2
	PARC_cac1_02092005-03.01978.01978.2	3.2534	0.2974	1097.91	1098.333	1	1489.1	93.8%	1	R.LPSQVVWIR.R	2

ORFP:YCR012W

13.7%

416

44738

7.6

PGK1 SGDID:S0000605, Chr III from 137740-138990

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.03267.03267.2	4.0881	0.2625	1768.77	1769.097	1	1163.9	56.2%	2	K.ALENPTRPFLAILGGAK.V	2
*	PARC_cac1_02092005-05.03267.03267.3	3.9443	0.1483	2652.65	2650.18	4	1045.0	30.2%	1	K.ALENPTRPFLAILGGAKVADKIQLI.D	2
*	PARC_cac1_02092005-02.02368.02368.1	2.5477	0.1229	1185.67	1185.406	2	817.8	72.2%	1	K.IQLIDNLLDK.V	1
*	PARC_cac1_02092005-03.03032.03032.2	4.9582	0.4923	1720.97	1720.965	1	1058.7	67.9%	1	K.TIVWNGPPGVFEFEK.F	2
*	PARC_cac1_02092005-02.02262.02262.1	2.5811	0.2328	1189.65	1190.382	115	165.2	45.0%	1	K.ELPGVAFLSEK.K	1

ORFP:YKL060C

13.1%

359

39621

5.8

FBA1 SGDID:S0001543, Chr XI from 327128-326049, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02203.02203.2	3.8427	0.4961	2035.09	2036.304	1	677.8	55.6%	1	R.SIAPAYGIPVVLHSDHCAK.K	2
*	PARC_cac1_02092005-04.02070.02070.1	3.1231	0.2807	1266.53	1267.47	1	610.7	59.1%	2	K.ALHPISPNFSIA.A	1
*	PARC_cac1_02092005-04.02092.02092.1	2.4096	0.2348	1339.38	1338.549	1	703.9	54.2%	1	K.ALHPISPNFSIAA.A	1
*	PARC_cac1_02092005-04.00951.00951.2	3.3683	0.3935	1579.11	1578.765	1	687.9	53.6%	2	M.SPVGNPEGPEKPNKK.F	2

ORFP:YML124C

12.6%

445

49694

5.2

TUB3 SGDID:S0004593, Chr XIII from 23684-23660,23361-22049, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.03258.03258.2	3.97	0.4149	2439.75	2439.687	1	1369.6	55.0%	2	R.FDGSLNVDLNEFQTNLVPYPR.I	2 2
*	PARC_cac1_02092005-05.03187.03187.1	3.2497	0.4897	1585.89	1585.93	1	790.8	57.7%	1	R.IHFPLVSYAPILSK.K	1
*	PARC_cac1_02092005-02.02459.02459.2	3.1733	0.2238	2318.93	2317.567	1	403.0	40.0%	1	K.IGICYEPPSVIPSSELANVDR.A	2

Similarities: ORFP:YML085C(1:2)

U	ORFP:YBL072C	2	3	12.5%	200	22490	10.7	RPS8A SGDID:S0000168, Chr II from 89120-88518, reverse complement
U	ORFP:YER102W	2	3	12.5%	200	22490	10.7	RPS8B SGDID:S0000904, Chr V from 363096-363698

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01842.01842.1	1.9279	0.2756	1301.96	1302.516	76	133.8	36.4%	1	K.AAIVQIDATPFR.Q	1
	PARC_cac1_02092005-04.01746.01746.2	3.7884	0.4049	1564.01	1565.728	1	601.5	70.8%	2	R.QWFEAHYGQTLGK.K	2

ORFP:YCR009C

12.1%

265

30250

6.6

RVS161 SGDID:S0000602, Chr III from 131536-130739, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.03556.03556.2	3.2336	0.3791	2226.79	2227.43	1	569.5	37.5%	1	R.AVTASQTTIAEVISNLYDDSK.Y	2
*	PARC_cac1_02092005-02.02123.02123.1	2.6142	0.0838	1347.63	1348.499	43	385.1	60.0%	1	K.DIFENLNNQLK.T	1

ORFP:YGL008C

11.9%

918

99619

5.1

PMA1 SGDID:S0002976, Chr VII from 482669-479913, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02332.02332.2	3.2311	0.2445	2479.31	2481.716	1	411.4	35.7%	1	R.PVPEEYLQTDPSYGLTSDEVLK.R	2
*	PARC_cac1_02092005-05.03255.03255.2	5.0398	0.4389	2654.41	2653.909	1	912.0	43.5%	3	R.IVTEDCFLQIDQSAITGESLAVDK.H	2
	PARC_cac1_02092005-02.01294.01294.1	1.9735	0.3196	1075.32	1076.296	1	509.7	60.0%	1	K.MLTGDAVGIAK.E	1 1
	PARC_cac1_02092005-02.03746.03746.3	6.0397	0.4842	3262.67	3263.562	1	1269.7	33.9%	1	R.LGLGGGGDMPGSELADFVENADGFAEVFPQHK.Y	3 3
	PARC_cac1_02092005-02.04319.04319.2	3.4541	0.2269	1987.59	1986.359	1	546.0	50.0%	1	R.SAADIVFLAPGLSAIIDALK.T	2 2

Similarities: ORFP:YPL036W(3:2)

U	ORFP:YLR448W	2	2	11.4%	176	19986	10.1	RPL6B SGDID:S0004440, Chr XII from 1028848-1028862,1029247-1029762
U	ORFP:YML073C	2	2	11.4%	176	19961	10.1	RPL6A SGDID:S0004538, Chr XIII from 124172-124158,123742-123227, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.03834.03834.1	2.2722	0.2008	1197.56	1196.516	461	247.3	40.9%	1	R.ASLVPGTVLILL.A	1
	PARC_cac1_02092005-02.01671.01671.1	1.9897	0.1504	1018.45	1018.157	5	435.7	64.3%	1	K.FNVEYFAK.E	1

ORFP:YBR088C

11.2%

258

28916

4.6

POL30 SGDID:S0000292, Chr II from 425722-424946, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02414.02414.1	2.1007	0.1693	1180.82	1181.389	2	396.4	61.1%	1	K.LMDIDADFLK.I	1
*	PARC_cac1_02092005-02.02322.02322.2	4.6241	0.4326	2173.41	2174.366	1	744.9	52.8%	1	K.IEELQYDSTLSLPSSEFSK.I	2

KERATIN05

11.0%

471

51531

5.2

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_cac1_02092005-02.01264.01264.1	2.5466	0.3282	1301.45	1302.424	3	469.3	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
*	PARC_cac1_02092005-02.02308.02308.1	2.6808	0.1387	1174.47	1173.267	1	551.7	68.8%	2	K.DAEEWFFTK.T	1
	PARC_cac1_02092005-02.01118.01118.1	2.0179	0.1448	1361.45	1362.48	1	215.4	54.2%	1	R.EVATNSELVQSGK.S	1 1
	PARC_cac1_02092005-02.01247.01247.1	2.3598	0.1709	1220.4	1221.307	6	273.9	55.0%	1	K.ASLENSLEETK.G	1 1 1

Similarities: KERATIN02(1:4)
KERATIN03(1:4)
KERATIN12(2:3)
KERATIN08(3:2)
KERATIN07(3:2)
KERATIN06(2:3)

ORFP:YML085C

10.7%

447

49800

5.1

TUB1 SGDID:S0004550, Chr XIII from 99400-99376,99259-97941, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.03258.03258.2	3.97	0.4149	2439.75	2439.687	1	1369.6	55.0%	2	R.FDGSLNVDLNEFQTNLVPYPR.I	2 2
*	PARC_cac1_02092005-05.02843.02843.2	3.7779	0.3957	1586.31	1587.902	1	789.1	73.1%	1	R.IHFPLVSYSPVLSK.S	2
*	PARC_cac1_02092005-02.02355.02355.2	3.4072	0.267	1553.31	1551.749	1	1038.5	70.8%	1	K.TVQLVDWCPTGFK.I	2

Similarities: ORFP:YML124C(1:2)

ORFP:YOR310C

10.2%

511

56956

8.9

NOP58 SGDID:S0005837, Chr XV from 898353-896818, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.04372.04372.3	5.2152	0.4338	3587.36	3586.95	1	1267.2	26.6%	1	K.TAAEVSMGTEITQTDLDNINALAEQIVEFAAYR.E	3
*	PARC_cac1_02092005-02.01374.01374.2	3.642	0.3922	2096.99	2098.144	1	499.8	41.7%	1	R.YDALAEDRDDSGDIGLESR.A	2

ORFP:YMR183C

10.2%

295

33734

4.9

SSO2 SGDID:S0004795, Chr XIII from 627807-626920, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02875.02875.2	3.662	0.352	2003.09	2002.185	1	999.4	53.1%	1	R.SLDDYISQATDLQYQLK.A	2
*	PARC_cac1_02092005-02.03435.03435.2	2.7149	0.0813	2346.27	2343.558	9	239.9	34.2%	1	T.DLQYQLKADIKDAQRDGLHD.S	2

ORFP:YLR249W

10.1%

1044

115945

6.0

YEF3 SGDID:S0004239, Chr XII from 636780-639914

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01990.01990.2	3.5665	0.2919	1637.15	1634.916	1	967.5	67.9%	1	K.ALLPHLTNAIVETNK.W	2
*	PARC_cac1_02092005-02.00926.00926.1	1.8771	0.2857	835.56	835.994	1	538.8	68.8%	1	K.AAATAAMTK.A	1
*	PARC_cac1_02092005-02.02462.02462.2	3.9274	0.3855	1526.47	1526.816	1	2054.1	80.8%	1	K.LVEDPQVIAPFLGK.L	2
*	PARC_cac1_02092005-07.03036.03036.3	5.0069	0.4005	3156.86	3156.386	1	1164.7	28.6%	1	R.TVYVEHDIDGTHSDTSVLDFVFESGVGTK.E	3
*	PARC_cac1_02092005-03.02498.02498.3	5.4295	0.4044	3251.24	3250.573	1	618.0	28.7%	1	K.VTNMEFQYPGTSKPQITDINFQCSLSSR.I	3
*	PARC_cac1_02092005-02.01754.01754.1	1.8922	0.1488	1188.36	1189.354	13	358.1	61.1%	1	K.NLTEEVWAVK.D	1

ORFP:YBL075C

9.7%

649

70547

5.2

SSA3 SGDID:S0000171, Chr II from 86443-84494, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01866.01866.2	3.3987	0.3754	1897.21	1896.067	3	328.6	46.9%	1	T.VNDAVVTVPAYFNDSQR.Q	2 2 2
PARC_cac1_02092005-03.02475.02475.2	3.3189	0.3692	1528.67	1527.686	1	957.6	72.7%	1	R.ARFEELCADLFR.S	2 2 2 2
PARC_cac1_02092005-02.02734.02734.2	3.9947	0.4484	1773.25	1772.955	1	1144.7	66.7%	1	Y.ADNQPGVLIQVFEGER.T	2 2 2 2
PARC_cac1_02092005-03.02751.02751.2	3.9325	0.4982	1939.21	1939.222	1	755.0	55.9%	1	K.DNNLLGKFELSGIPPAPR.G	2 2 2 2
PARC_cac1_02092005-03.01766.01766.1	2.7211	0.2654	1184.76	1184.381	1	481.5	65.0%	1	K.FELSGIPPAPR.G	1 1 1 1

Similarities: ORFP:YLL024C(5:0)
ORFP:YAL005C(5:0)
ORFP:YER103W(4:1)

ORFP:YBL030C

9.7%

318

34426

9.8

PET9 SGDID:S0000126, Chr II from 163959-163003, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01270.01270.1	1.8582	0.2856	988.44	989.203	1	431.8	61.1%	1	K.TPLPPAPAPK.K	1
*	PARC_cac1_02092005-04.01159.01159.1	1.9011	0.2024	791.09	790.981	1	593.5	78.6%	1	P.LPPAPAPK.K	1
*	PARC_cac1_02092005-03.04236.04236.2	4.848	0.6219	2199.39	2199.631	1	1392.0	57.5%	1	R.GVAGAGVISMYDQLQMILFGK.K	2

ORFP:YLR175W

9.5%

483

54705

8.9

CBF5 SGDID:S0004165, Chr XII from 506136-507587

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.02472.02472.3	4.5611	0.4545	2828.45	2829.182	1	1489.5	34.0%	1	K.SYISSGVINLDKPSNPSSHEVVAWIK.R	2 3
*	PARC_cac1_02092005-04.03239.03239.2	4.3432	0.4737	2155.05	2155.545	1	526.7	39.5%	1	R.SLENLTGALFQRPPLISAVK.R	2

ORFP:YMR303C

9.5%

348

36732

6.7

ADH2 SGDID:S0004918, Chr XIII from 874337-873291, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.01574.01574.1	1.8078	0.1483	1021.6	1022.276	7	349.0	56.2%	1	H.KDIPVPKPK.P	1 1
	PARC_cac1_02092005-04.01416.01416.1	1.8065	0.1526	1135.42	1135.308	135	374.2	54.5%	1	T.KLPLVGGHEGAG.V	1 1
*2	PARC_cac1_02092005-03.02698.02698.1	2.4228	0.2546	1313.65	1313.493	24	396.8	45.5%	1	T.SLGGEVFIDFTK.E	1 1

Similarities: ORFP:YOL086C(3:0)

ORFP:YPR110C

9.0%

335

37687

5.5

RPC40 SGDID:S0006314, Chr XVI from 746831-745824, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.01756.01756.2	2.6748	0.3778	1349.97	1349.499	1	886.1	75.0%	1	K.AHCILGIGGDHAK.F	2
*	PARC_cac1_02092005-04.02524.02524.2	4.7961	0.4669	1889.95	1891.264	1	849.3	68.8%	1	R.LLPQINILQPIKGESAR.R	2

U	ORFP:YAR010C	2	3	8.9%	440	49072	7.6	YAR010C SGDID:S0000068, Chr I from 165866-164544, reverse complement
U	ORFP:YGR038C-A	2	3	8.9%	440	49034	8.2	YGR038C-A SGDID:S0007407, Chr VII from 567468-566146, reverse complement
U	ORFP:YGR027W-A	2	3	8.9%	440	49056	7.9	YGR027W-A SGDID:S0007405, Chr VII from 536058-537380
U	ORFP:YER159C-A	2	3	8.9%	440	49129	7.9	YER159C-A SGDID:S0007403, Chr V from 498119-496797, reverse complement
U	ORFP:YER137C-A	2	3	8.9%	440	48953	7.9	YER137C-A SGDID:S0007402, Chr V from 449020-447698, reverse complement
U	ORFP:YDR365W-A	2	3	8.9%	440	48953	7.9	YDR365W-A SGDID:S0007400, Chr IV from 1206985-1208307
U	ORFP:YDR316W-A	2	3	8.9%	440	49129	7.9	YDR316W-A SGDID:S0007398, Chr IV from 1096056-1097378
U	ORFP:YDR261C-C	2	3	8.9%	440	49009	7.6	YDR261C-C SGDID:S0007394, Chr IV from 992340-991018, reverse complement
U	ORFP:YDR210C-C	2	3	8.9%	440	49187	8.2	YDR210C-C SGDID:S0007409, Chr IV from 883919-882597, reverse complement
U	ORFP:YDR098C-A	2	3	8.9%	440	49057	8.2	YDR098C-A SGDID:S0007390, Chr IV from 651119-649797, reverse complement
U	ORFP:YBR012W-A	2	3	8.9%	440	49068	7.9	YBR012W-A SGDID:S0002154, Chr II from 259826-261148

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.02990.02990.2	3.142	0.3407	2259.57	2259.631	1	367.3	44.4%	1	K.YVRPPPMLTSPNDFPNWVK.T	2 2
	PARC_cac1_02092005-05.02488.02488.2	4.3044	0.3476	2127.29	2125.479	1	552.6	47.4%	2	K.FLQNSNLGGIIPTVNGKPVR.Q	2 2

Similarities: ORFP:YBR012W-B(2:0)

ORFP:YER165W

8.8%

577

64344

6.0

PAB1 SGDID:S0000967, Chr V from 510368-512101

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01379.01379.1	2.1709	0.2136	1108.47	1109.27	12	361.2	62.5%	1	K.AHYTNLYVK.N	1
*	PARC_cac1_02092005-02.02496.02496.2	3.5707	0.5177	2786.71	2787.948	1	801.0	41.7%	1	K.NLDDSVDDEKLEEEFAPYGTITSAK.V	2
*	PARC_cac1_02092005-05.02122.02122.2	3.9524	0.428	1870.15	1870.205	1	668.2	59.4%	2	K.NQQIVAGKPLYVAIAQR.K	2

KERATIN12

8.8%

431

47974

5.0

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02018.02018.2	2.6283	0.1538	1852.31	1854.088	72	191.7	36.7%	1	K.ATMQNLNDRLASYLDK.V	2
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
*	PARC_cac1_02092005-02.02371.02371.1	2.0706	0.1944	1144.5	1145.213	2	435.6	62.5%	1	K.DAEDWFFSK.T	1
	PARC_cac1_02092005-02.01118.01118.1	2.0179	0.1448	1361.45	1362.48	1	215.4	54.2%	1	R.EVATNSELVQSGK.S	1 1

Similarities: KERATIN02(1:3)
KERATIN03(1:3)
KERATIN05(2:2)
KERATIN08(1:3)
KERATIN07(1:3)
KERATIN06(1:3)

KERATIN18

8.7%

562

59822

8.0

no description

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.03082.03082.1	3.4285	0.2609	1329.42	1330.521	1	696.9	72.7%	4	R.NLDLDSIIAEVK.A	1 1 1 1
PARC_cac1_02092005-02.01130.01130.1	1.9669	0.256	1107.57	1108.196	19	380.1	56.2%	1	K.AQYEEIAQR.S	1 1 1 1
PARC_cac1_02092005-03.02291.02291.1	2.0081	0.1886	1263.98	1264.464	13	243.1	45.0%	1	K.LALDVEIATYR.K	1 1 1 1 1
PARC_cac1_02092005-02.00960.00960.2	2.598	0.1348	1531.77	1532.61	5	518.1	46.9%	1	S.YGSGLGVGGGFSSSSGR.A	2 2

Similarities: KERATIN22(3:1)
KERATIN21(4:0)
KERATIN17(2:2)
KERATIN15(1:3)
KERATIN16(1:3)

ORFP:YBR061C

8.7%

310

34701

7.9

TRM7 SGDID:S0000265, Chr II from 365678-364746, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02030.02030.2	3.1679	0.2251	1949.29	1948.328	5	435.3	41.2%	1	K.IVSVDLQPMSPIPHVTTL.Q	2
*	PARC_cac1_02092005-01.01188.01188.1	1.9865	0.1016	1134.5	1136.247	32	361.1	56.2%	1	D.LDEYVQQQL.I	1

ORFP:YGR159C

8.5%

414

44535

4.9

NSR1 SGDID:S0003391, Chr VII from 807658-806414, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02880.02880.2	3.6868	0.4725	2630.27	2629.842	1	572.7	41.3%	1	K.KFGDTPSEPSDTLFLGNLSFNADR.D	2
*	PARC_cac1_02092005-03.00827.00827.2	3.1308	0.4136	1277.05	1277.42	1	653.6	80.0%	1	R.IPTHPETEQPK.G	2

ORFP:YER103W

8.4%

642

69651

5.1

SSA4 SGDID:S0000905, Chr V from 364585-366513

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-03.02475.02475.2	3.3189	0.3692	1528.67	1527.686	1	957.6	72.7%	1	R.ARFEELCADLFR.S	2 2 2 2
PARC_cac1_02092005-04.03199.03199.2	3.7312	0.4198	2714.39	2714.992	1	611.4	39.1%	1	K.KSEVFSTYADNQPGVLIQVFEGER.T	2 2
PARC_cac1_02092005-03.03243.03243.3	5.8107	0.1936	2714.6	2714.992	1	1580.1	35.9%	1	K.KSEVFSTYADNQPGVLIQVFEGER.T	3 3
PARC_cac1_02092005-03.03462.03462.2	3.65	0.3906	2589.33	2586.817	1	387.1	36.4%	1	K.SEVFSTYADNQPGVLIQVFEGER.T	2 2
PARC_cac1_02092005-02.02734.02734.2	3.9947	0.4484	1773.25	1772.955	1	1144.7	66.7%	1	Y.ADNQPGVLIQVFEGER.T	2 2 2 2
PARC_cac1_02092005-03.02751.02751.2	3.9325	0.4982	1939.21	1939.222	1	755.0	55.9%	1	K.DNNLLGKFELSGIPPAPR.G	2 2 2 2
PARC_cac1_02092005-03.01766.01766.1	2.7211	0.2654	1184.76	1184.381	1	481.5	65.0%	1	K.FELSGIPPAPR.G	1 1 1 1

Similarities: ORFP:YLL024C(7:0)
ORFP:YAL005C(4:3)
ORFP:YBL075C(4:3)

GR78_SCHPO

8.3%

663

73081

4.9

owl|P36604| 78 KD GLUCOSE REGULATED PROTEIN HOMOLOG PRECURSOR (GRP 78) (IMMUNOGLOBULIN...

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01932.01932.2	2.7364	0.1057	2230.09	2229.451	64	278.4	27.5%	1	R.LVGEAAKNQAPSNPENTIFDI.K	2
*	PARC_cac1_02092005-07.04708.04708.3	3.52	0.1004	3963.89	3965.279	14	360.4	16.7%	1	V.EDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPIT.Q	3

ORFP:YLR197W

8.3%

504

56864

8.9

SIK1 SGDID:S0004187, Chr XII from 546099-547613

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.03267.03267.2	3.2501	0.1932	2540.45	2539.718	1	548.9	37.0%	1	K.ASLNDDSLHDLAALLNEDSGIAQR.V	2
*	PARC_cac1_02092005-02.02282.02282.2	4.8038	0.4176	1899.11	1899.064	1	541.2	53.1%	1	R.IDNYSEEPSNVFGSVLK.K	2
*	PARC_cac1_02092005-02.01908.01908.2	3.1139	0.3383	2027.49	2027.238	1	305.9	38.2%	1	R.IDNYSEEPSNVFGSVLKK.Q	2

KERATIN08

8.3%

469

50499

5.0

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_cac1_02092005-02.01264.01264.1	2.5466	0.3282	1301.45	1302.424	3	469.3	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
*	PARC_cac1_02092005-02.02039.02039.1	2.3708	0.2734	1096.61	1097.213	10	455.6	62.5%	1	R.DAETWFLSK.T	1
	PARC_cac1_02092005-02.01247.01247.1	2.3598	0.1709	1220.4	1221.307	6	273.9	55.0%	1	K.ASLENSLEETK.G	1 1 1

Similarities: KERATIN02(1:3)
KERATIN03(1:3)
KERATIN05(3:1)
KERATIN12(1:3)
KERATIN07(3:1)
KERATIN06(2:2)

U	ORFP:YGL147C	2	2	7.9%	191	21569	9.7	RPL9A SGDID:S0003115, Chr VII from 228332-227757, reverse complement
U	ORFP:YNL067W	2	2	7.9%	191	21657	9.7	RPL9B SGDID:S0005011, Chr XIV from 499678-500253

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-04.02454.02454.2	4.2649	0.476	1806.97	1807.102	1	1014.7	75.0%	1	R.YVYAHFPINVNIVEK.D	2
	PARC_cac1_02092005-04.01898.01898.1	2.3499	0.1537	1381.61	1381.618	93	294.1	45.5%	1	Y.AHFPINVNIVEK.D	1

ORFP:YNL064C

7.6%

409

44671

6.3

YDJ1 SGDID:S0005008, Chr XIV from 507093-505864, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.03223.03223.2	2.7006	0.1878	1882.57	1881.176	1	284.0	46.9%	1	K.FYDILGVPVTATDVEIK.K	2
*	PARC_cac1_02092005-03.02002.02002.1	2.7702	0.371	1394.77	1395.703	1	469.3	53.8%	2	K.VGIVPGEVIAPGMR.K	1

ORFP:YGR155W

7.5%

507

56022

6.7

CYS4 SGDID:S0003387, Chr VII from 798545-800068

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02960.02960.2	2.8665	0.2906	1716.97	1718.049	1	804.4	53.3%	1	R.HNVIDLVGNTPLIALK.K	2
*	PARC_cac1_02092005-02.03278.03278.2	3.8336	0.3418	2129.55	2127.486	2	359.0	38.1%	1	R.STLIEPTSGNTGIGLALIGAIK.G	2

ORFP:YLR134W

7.3%

563

61912

6.4

PDC5 SGDID:S0004124, Chr XII from 410724-412415

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01630.01630.2	5.1395	0.5761	1998.01	1999.106	1	1879.1	63.9%	2	R.WAGNANELNAAYAADGYAR.I	2 2
PARC_cac1_02092005-04.03060.03060.1	2.4838	0.2108	1251.72	1251.469	1	457.7	59.1%	1	L.PANLVDLNVPAK.L	1 1
PARC_cac1_02092005-03.01475.01475.1	2.4662	0.3143	1092.59	1093.286	1	357.0	61.1%	1	R.NATFPGVQMK.F	1 1

Similarities: ORFP:YLR044C(3:0)

ORFP:YBR127C

7.2%

517

57749

5.1

VMA2 SGDID:S0000331, Chr II from 492777-491224, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02540.02540.2	3.2498	0.3996	1932.01	1931.24	1	871.3	52.9%	1	R.LNYNTVSGVNGPLVILEK.V	2
*	PARC_cac1_02092005-02.02750.02750.2	2.6156	0.1893	2156.17	2155.372	1	805.7	47.2%	1	K.VFAEDYLDINGSPINPYAR.I	2

INT-STD1

6.8%

607

69271

6.1

BSA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01686.01686.1	2.2168	0.221	1163.5	1164.344	2	574.7	61.1%	1	K.LVNELTEFAK.T	1
*	PARC_cac1_02092005-04.01582.01582.2	3.3866	0.3991	1640.67	1640.921	1	691.6	64.3%	2	R.KVPQVSTPTLVEVSR.S	2
*	PARC_cac1_02092005-04.01775.01775.2	3.5406	0.334	1881.89	1882.089	1	765.8	63.3%	1	R.RPCFSALTPDETYVPK.A	2

ORFP:YPL036W

6.7%

947

102172

5.0

PMA2 SGDID:S0005957, Chr XVI from 482839-485682

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01294.01294.1	1.9735	0.3196	1075.32	1076.296	1	509.7	60.0%	1	K.MLTGDAVGIAK.E	1 1
PARC_cac1_02092005-02.03746.03746.3	6.0397	0.4842	3262.67	3263.562	1	1269.7	33.9%	1	R.LGLGGGGDMPGSELADFVENADGFAEVFPQHK.Y	3 3
PARC_cac1_02092005-02.04319.04319.2	3.4541	0.2269	1987.59	1986.359	1	546.0	50.0%	1	R.SAADIVFLAPGLSAIIDALK.T	2 2

Similarities: ORFP:YGL008C(3:0)

KERATIN07

6.3%

473

50915

5.5

no description

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
PARC_cac1_02092005-02.01264.01264.1	2.5466	0.3282	1301.45	1302.424	3	469.3	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
PARC_cac1_02092005-02.01247.01247.1	2.3598	0.1709	1220.4	1221.307	6	273.9	55.0%	1	K.ASLENSLEETK.G	1 1 1

Similarities: KERATIN02(1:2)
KERATIN03(1:2)
KERATIN05(3:0)
KERATIN12(1:2)
KERATIN08(3:0)
KERATIN06(2:1)

ORFP:YLR304C

5.8%

778

85368

8.1

ACO1 SGDID:S0004295, Chr XII from 737548-735212, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.02031.02031.2	2.884	0.1756	1320.45	1322.43	34	367.2	60.0%	1	V.TVHCDHLIQAQ.V	2
*	PARC_cac1_02092005-05.03098.03098.3	3.8205	0.166	3782.0	3782.146	10	379.2	18.9%	1	D.LLSADKDAEYDEVVEIDLNTLEPYINGPFTPDLA.T	3

KERATIN17

5.6%

590

62461

8.1

no description

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-02.01094.01094.1	2.7388	0.1571	1152.48	1153.234	10	454.5	75.0%	1	K.NKYEDEINK.R	1 1 1 1
PARC_cac1_02092005-03.00822.00822.2	3.2835	0.197	1309.23	1309.422	1	900.0	77.8%	1	K.NKYEDEINKR.T	2 2 2 2
PARC_cac1_02092005-03.00864.00864.1	2.6112	0.2073	1310.55	1309.422	1	284.6	61.1%	2	K.NKYEDEINKR.T	1 1 1 1
PARC_cac1_02092005-02.03082.03082.1	3.4285	0.2609	1329.42	1330.521	1	696.9	72.7%	4	R.NLDLDSIIAEVK.A	1 1 1 1
PARC_cac1_02092005-03.02291.02291.1	2.0081	0.1886	1263.98	1264.464	13	243.1	45.0%	1	K.LALDVEIATYR.K	1 1 1 1 1

Similarities: KERATIN13(3:2)
KERATIN22(2:3)
KERATIN21(5:0)
KERATIN18(2:3)
KERATIN20(3:2)
KERATIN15(1:4)

ORFP:YGL013C

5.5%

1068

121793

6.9

PDR1 SGDID:S0002981, Chr VII from 472301-469095, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01696.01696.2	3.9328	0.4328	2298.65	2299.561	1	648.7	45.5%	1	K.MNLLPSTPSSISSAGSPNTAHTK.S	2
*	PARC_cac1_02092005-07.02608.02608.2	3.9776	0.3993	1828.53	1828.17	1	1303.0	63.3%	1	K.SHVALVINHLPQPFVR.N	2
*	PARC_cac1_02092005-02.02278.02278.2	2.7162	0.0914	2286.21	2286.256	1	430.1	34.2%	1	N.NNNNNNNNKNNINNINNNNS.N	2

U	ORFP:YDR385W	2	2	5.0%	842	93289	6.3	EFT2 SGDID:S0002793, Chr IV from 1243218-1245746
U	ORFP:YOR133W	2	2	5.0%	842	93289	6.3	EFT1 SGDID:S0005659, Chr XV from 575098-577626

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-07.03799.03799.2	2.647	0.171	2576.55	2574.898	1	406.6	30.4%	1	R.VTDGALVVVDTIEGVCVQTETVLR.Q	2
	PARC_cac1_02092005-03.01616.01616.2	3.8704	0.5117	1971.87	1973.236	1	872.5	52.9%	1	R.GQVVSEEQRPGTPLFTVK.A	2

ORFP:YPL235W

4.9%

471

51612

5.3

RVB2 SGDID:S0006156, Chr XVI from 103232-104647

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.01266.01266.1	2.2744	0.3764	1096.58	1097.3	1	713.3	63.6%	1	R.AVLVAGPPSTGK.T	1
*	PARC_cac1_02092005-05.02751.02751.2	3.6748	0.3149	1328.39	1325.553	1	763.2	80.0%	1	K.RAYLLFLDSAR.S	2

ORFP:YDR310C

4.7%

1062

118201

6.2

SUM1 SGDID:S0002718, Chr IV from 1084307-1081119, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02764.02764.2	3.782	0.4334	2514.19	2515.826	1	642.6	37.5%	1	K.SASNQGAPFSPVNITLPTAVVQTSK.S	2
*	PARC_cac1_02092005-03.01943.01943.2	2.8163	0.3062	2666.73	2666.991	20	165.2	20.8%	1	K.ERPSTANSSSITPTPVTPNNLIQIK.R	2

U	ORFP:YBR012W-B	4	5	4.4%	1756	198868	8.5	YBR012W-B SGDID:S0002155, Chr II from 259826-261130,261132-265097
U	ORFP:YGR038C-B	4	5	4.4%	1755	198520	8.2	YGR038C-B SGDID:S0007408, Chr VII from 567468-566164,566162-562200, reverse complement
U	ORFP:YGR027W-B	4	5	4.4%	1755	198656	8.2	YGR027W-B SGDID:S0007406, Chr VII from 536058-537362,537364-541326
U	ORFP:YER160C	4	5	4.4%	1755	198568	8.5	YER160C SGDID:S0000962, Chr V from 498119-496818,496816-492851, reverse complement
U	ORFP:YER138C	4	5	4.4%	1755	198561	8.1	YER138C SGDID:S0000940, Chr V from 449020-447719,447717-443752, reverse complement
U	ORFP:YDR365W-B	4	5	4.4%	1755	198658	8.0	YDR365W-B SGDID:S0007401, Chr IV from 1206985-1208289,1208291-1212253
U	ORFP:YDR316W-B	4	5	4.4%	1755	198526	8.2	YDR316W-B SGDID:S0007399, Chr IV from 1096056-1097360,1097362-1101324
U	ORFP:YDR261C-D	4	5	4.8%	1604	181660	7.5	YDR261C-D SGDID:S0007395, Chr IV from 992340-991036,991034-987525, reverse complement
U	ORFP:YDR210C-D	4	5	4.4%	1755	198838	8.4	YDR210C-D SGDID:S0007410, Chr IV from 883919-882615,882613-878651, reverse complement
U	ORFP:YDR098C-B	4	5	4.4%	1755	198594	8.4	YDR098C-B SGDID:S0007391, Chr IV from 651119-649815,649813-645851, reverse complement

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
PARC_cac1_02092005-05.02990.02990.2	3.142	0.3407	2259.57	2259.631	1	367.3	44.4%	1	K.YVRPPPMLTSPNDFPNWVK.T	2 2
PARC_cac1_02092005-05.02488.02488.2	4.3044	0.3476	2127.29	2125.479	1	552.6	47.4%	2	K.FLQNSNLGGIIPTVNGKPVR.P	2 2
PARC_cac1_02092005-05.03756.03756.3	6.3931	0.4458	3155.12	3154.553	1	774.3	26.7%	1	R.QHAGLAGLDISTLLPFGQPVIVNDHNPNSK.I	3 3
PARC_cac1_02092005-05.01798.01798.1	1.8893	0.1346	864.48	865.107	4	485.0	78.6%	1	R.IHLIAAVK.A	1 1

Similarities: ORFP:YAR010C(2:2)
ORFP:YAR009C(2:2)

ORFP:YDL185W

4.3%

1071

118637

6.2

TFP1 SGDID:S0002344, Chr IV from 126788-130003

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02794.02794.2	3.6883	0.3011	2796.41	2795.037	1	904.7	42.0%	1	K.FQVGDHISGGDIYGSVFENSLISSHK.I	2
*	PARC_cac1_02092005-02.03246.03246.2	2.7528	0.2869	2485.87	2483.662	1	368.0	34.2%	1	K.EDFLQQNGYSTYDAFCPIWK.T	2

U	ORFP:YMR186W	2	2	4.3%	705	80900	4.8	HSC82 SGDID:S0004798, Chr XIII from 632354-634471
U	ORFP:YPL240C	2	2	4.2%	709	81406	4.9	HSP82 SGDID:S0006161, Chr XVI from 98625-96496, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.04188.04188.2	4.4423	0.4514	2252.29	2252.569	1	633.4	58.3%	1	R.VFITDEAEDLIPEWLSFVK.G	2
	PARC_cac1_02092005-02.01620.01620.2	3.2369	0.3431	1303.33	1301.482	1	888.1	80.0%	1	K.NIYYITGESLK.A	2

KERATIN20

4.3%

483

53748

5.4

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01094.01094.1	2.7388	0.1571	1152.48	1153.234	10	454.5	75.0%	1	K.NKYEDEINK.R	1 1 1 1
	PARC_cac1_02092005-03.00822.00822.2	3.2835	0.197	1309.23	1309.422	1	900.0	77.8%	1	K.NKYEDEINKR.T	2 2 2 2
	PARC_cac1_02092005-03.00864.00864.1	2.6112	0.2073	1310.55	1309.422	1	284.6	61.1%	2	K.NKYEDEINKR.T	1 1 1 1
2	PARC_cac1_02092005-04.02543.02543.2	4.5682	0.2608	1278.65	1278.491	1	2040.2	90.0%	1	K.LALDIEIATYR.K	2 2 2 2
2	PARC_cac1_02092005-04.02538.02538.1	2.7546	0.2092	1279.57	1278.491	7	331.6	60.0%	10	K.LALDIEIATYR.K	1 1 1 1

Similarities: KERATIN13(5:0)
KERATIN21(3:2)
KERATIN17(3:2)
KERATIN16(2:3)
KERATIN19(2:3)

ORFP:YFR015C

4.2%

708

80510

6.0

GSY1 SGDID:S0001911, Chr VI from 176383-174257, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02846.02846.2	2.5213	0.1519	2298.77	2299.43	10	300.3	30.6%	1	N.DFVRGHFHGCFDFDLDNTV.Y	2
*	PARC_cac1_02092005-05.01591.01591.1	1.8626	0.0838	1283.49	1283.516	28	242.6	45.0%	1	L.RRPYGELPPVV.T	1

KERATIN06

4.2%

456

49168

4.8

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01182.01182.1	2.0924	0.1429	810.47	809.938	19	557.9	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_cac1_02092005-02.01264.01264.1	2.5466	0.3282	1301.45	1302.424	3	469.3	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1

Similarities: KERATIN02(1:1)
KERATIN03(1:1)
KERATIN05(2:0)
KERATIN12(1:1)
KERATIN08(2:0)
KERATIN07(2:0)

U	SPG1_STRSP	1	30	4.0%	448	47567	4.9	owl\|P06654\| IMMUNOGLOBULIN G BINDING PROTEIN G PRECURSOR (PROTEIN G). - STREPTOCOCCUS...
U	SPG2_STRSP	1	60	3.0%	593	63292	4.9	owl\|P19909\| IMMUNOGLOBULIN G BINDING PROTEIN G PRECURSOR (PROTEIN G). - STREPTOCOCCUS...

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-07.02334.02334.2	3.1617	0.2301	1941.23	1940.117	109	164.4	32.4%	30	K.ARISEATDGLSDFLKSQT.P	2

KERATIN15

3.8%

629

64511

6.5

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.03178.03178.1	3.2563	0.3041	1302.48	1303.452	1	1388.0	66.7%	7	R.SLDLDSIIAEVGA.Q	1
*	PARC_cac1_02092005-02.03096.03096.2	4.5993	0.3085	1303.27	1303.452	2	1574.0	79.2%	1	R.SLDLDSIIAEVGA.Q	2
	PARC_cac1_02092005-03.02291.02291.1	2.0081	0.1886	1263.98	1264.464	13	243.1	45.0%	1	K.LALDVEIATYR.K	1 1 1 1 1

Similarities: KERATIN22(1:2)
KERATIN21(1:2)
KERATIN18(1:2)
KERATIN17(1:2)

ORFP:YNL087W

3.7%

1178

132509

8.5

YNL087W SGDID:S0005031, Chr XIV from 462408-465944

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-05.02663.02663.2	2.7447	0.0901	2066.49	2066.404	29	229.1	33.3%	1	G.VTVLGGELPQPGLYVQTFF.D	2
*	PARC_cac1_02092005-02.03282.03282.2	3.175	0.2696	2511.83	2511.875	6	108.1	34.8%	1	K.AVVPLSTIDPESDTTFNIPLVGPK.G	2

KERATIN16

3.7%

534

57265

6.6

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-02.01130.01130.1	1.9669	0.256	1107.57	1108.196	19	380.1	56.2%	1	R.AQYEEIAQR.S	1 1 1 1
2	PARC_cac1_02092005-04.02543.02543.2	4.5682	0.2608	1278.65	1278.491	1	2040.2	90.0%	1	K.LALDIEIATYR.K	2 2 2 2
2	PARC_cac1_02092005-04.02538.02538.1	2.7546	0.2092	1279.57	1278.491	7	331.6	60.0%	10	K.LALDIEIATYR.K	1 1 1 1

Similarities: KERATIN13(2:1)
KERATIN22(1:2)
KERATIN21(1:2)
KERATIN18(1:2)
KERATIN20(2:1)
KERATIN19(2:1)

ORFP:YOR086C

3.5%

1186

133576

7.2

YOR086C SGDID:S0005612, Chr XV from 486780-483220, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.03292.03292.2	3.5744	0.4293	2516.91	2515.831	1	874.5	40.5%	1	K.SQTLNPVWNQVIYVAVTSPNQR.I	2
*	PARC_cac1_02092005-02.03823.03823.2	3.4225	0.4242	2294.61	2293.619	1	348.5	42.1%	1	Y.TSFYPALPVLTLEEIQDLDK.V	2

ORFP:YLR342W

3.3%

1876

214849

7.2

FKS1 SGDID:S0004334, Chr XII from 809997-815627

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.03548.03548.2	3.933	0.2856	2241.91	2242.536	1	1148.0	52.8%	1	K.IVGYDDLNQLFWYPEGIAK.I	2
	PARC_cac1_02092005-04.02934.02934.2	4.3255	0.4577	2431.47	2429.609	1	1343.2	57.9%	1	R.GEYIQLIDANQDNYLEECLK.I	2
*	PARC_cac1_02092005-07.03259.03259.2	3.6475	0.3394	2475.23	2475.761	1	785.0	42.9%	1	R.SVLAEFEELNVEQVNPYAPGLR.Y	2

U	ORFP:YAR009C	2	2	3.2%	1196	136732	8.6	YAR009C SGDID:S0000067, Chr I from 164187-160597, reverse complement
U	ORFP:YML045W	2	2	2.2%	1755	198524	8.2	YML045W SGDID:S0004508, Chr XIII from 184461-185765,185767-189729
U	ORFP:YML039W	2	2	2.2%	1755	198571	8.1	YML039W SGDID:S0004503, Chr XIII from 196628-197932,197934-201896
U	ORFP:YLR157C-B	2	2	2.2%	1755	198544	8.1	YLR157C-B SGDID:S0007374, Chr XII from 481602-480298,480296-476334, reverse complement
U	ORFP:YLR035C-A	2	2	3.3%	1155	131617	8.7	YLR035C-A SGDID:S0007225, Chr XII from 218908-215441, reverse complement
U	ORFP:YJR029W	2	2	2.2%	1755	198616	8.3	YJR029W SGDID:S0003790, Chr X from 478038-479338,479340-483306
U	ORFP:YJR027W	2	2	2.2%	1755	198651	8.0	YJR027W SGDID:S0003788, Chr X from 472454-473755,473757-477722
U	ORFP:YHR214C-B	2	2	2.1%	1793	202816	8.3	YHR214C-B SGDID:S0003534, Chr VIII from 549342-547927,547925-543960, reverse complement
U	ORFP:YGR161C-D	2	2	2.2%	1755	198558	8.5	YGR161C-D SGDID:S0007368, Chr VII from 823017-821713,821711-817749, reverse complement
U	ORFP:YBL005W-B	2	2	2.2%	1755	198968	8.2	YBL005W-B SGDID:S0002147, Chr II from 221292-222596,222598-226560

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	PARC_cac1_02092005-05.03756.03756.3	6.3931	0.4458	3155.12	3154.553	1	774.3	26.7%	1	R.QHAGLAGLDISTLLPFGQPVIVNDHNPNSK.I	3 3
	PARC_cac1_02092005-05.01798.01798.1	1.8893	0.1346	864.48	865.107	4	485.0	78.6%	1	R.IHLIAAVK.A	1 1

Similarities: ORFP:YBR012W-B(2:0)

ORFP:YJL098W

3.2%

1058

121403

4.4

SAP185 SGDID:S0003634, Chr X from 241779-244955

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-04.01284.01284.1	1.9319	0.1231	1196.46	1197.42	18	131.1	55.6%	1	D.YKAYKPNLSL.L	1
*	PARC_cac1_02092005-02.02995.02995.3	3.9766	0.0907	2842.52	2845.301	14	320.3	25.0%	1	L.DMNMDGIIEFILKKEHIVDDFLAH.I	3

ORFP:YAL035W

2.9%

1002

112268

5.8

FUN12 SGDID:S0000033, Chr I from 76429-79437

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.02579.02579.2	2.8362	0.0917	2106.51	2104.235	7	280.1	40.0%	1	E.QEKLEREEEERLEKEE.E	2
*	PARC_cac1_02092005-03.02496.02496.2	3.6678	0.4521	1374.15	1374.725	1	1895.9	83.3%	1	K.IPVMSIGLGPVYK.R	2

KERATIN19

2.4%

468

51203

5.5

no description

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
2	PARC_cac1_02092005-04.02543.02543.2	4.5682	0.2608	1278.65	1278.491	1	2040.2	90.0%	1	K.LALDIEIATYR.K	2 2 2 2
2	PARC_cac1_02092005-04.02538.02538.1	2.7546	0.2092	1279.57	1278.491	7	331.6	60.0%	10	K.LALDIEIATYR.K	1 1 1 1

Similarities: KERATIN13(2:0)
KERATIN20(2:0)
KERATIN16(2:0)

ORFP:YIL126W

2.1%

1359

156742

6.7

STH1 SGDID:S0001388, Chr IX from 117992-122071

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.01644.01644.1	2.3857	0.1662	1342.75	1342.448	2	367.2	60.0%	1	K.GFQYDEDLLNK.H	1
*	PARC_cac1_02092005-03.03162.03162.2	2.8689	0.0943	2185.01	2186.398	25	367.7	38.2%	1	T.VEKLVEEMREQLDEVDSH.P	2

ORFP:YGL195W

1.6%

2672

296697

5.3

GCN1 SGDID:S0003163, Chr VII from 131529-139547

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-02.02611.02611.2	2.5573	0.1317	2499.85	2499.015	5	245.0	33.3%	1	D.KEASIKVLINALVIAQWNIFNI.K	2
*	PARC_cac1_02092005-04.04004.04004.2	3.4014	0.2566	2439.79	2437.971	1	411.2	38.1%	1	K.KSDVIFPILIPTLLAPPIDAFR.A	2

ORFP:YMR280C

1.4%

1433

160485

9.0

CAT8 SGDID:S0004893, Chr XIII from 831329-827028, reverse complement

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	PARC_cac1_02092005-03.01512.01512.2	2.5357	0.1145	1383.57	1381.76	1	836.2	70.0%	1	V.KIKMEKIKYTV.P	2
*	PARC_cac1_02092005-02.01660.01660.1	2.0303	0.1651	1030.52	1031.256	110	345.4	56.2%	1	S.LPSNLDLMK.D	1

	Proteins	Peptide IDs	Copies
Unfiltered	4589	12964	15451
Redundant	175	710	1103
Nonredundant	121	583	899

/data/1/aobailey/Antczak/cac1_02092005/parc