D Gould

DTASelect v1.9
/data/1/edwinr/Data/Gould
/scratch/yates/ianpombe/pompep4896
SEQUEST 2.7 in SQT format.
-o -e contaminant
Jump to the summary table.

sequest.params modifications:

*	X	0.0
#	X	0.0
@	X	0.0
Static	C	57.0

true	Use criteria
1.8	Minimum +1 XCorr
2.5	Minimum +2 XCorr
3.5	Minimum +3 XCorr
0.08	Minimum DeltCN
1	Minimum charge state
3	Maximum charge state
0.0	Minimum ion proportion
1000	Maximum Sp rank
-1.0	Minimum Sp score
Include	Modified peptide inclusion
Any	Tryptic status requirement
true	Multiple, ambiguous IDs allowed
Ignore	Peptide validation handling
XCorr	Purge duplicate peptides by protein
false	Include only loci with unique peptide
true	Remove subset proteins
Ignore	Locus validation handling
contaminant	Exclude protein names matching
0	Minimum modified peptides per locus
10	Minimum redundancy for low coverage loci
2	Minimum peptides per locus

Locus Key:

Validation Status

Locus

Sequence Count

Spectrum Count

Sequence Coverage

Length

MolWt

Descriptive Name

Similarity Key:

Locus

# of identical peptides

# of differing peptides

YIP3_SCHPO

91.5%

10557

7.2

(Q9UT86) Hypothetical RING finger protein C343.03 in chromosome I

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.03571.03571.3	4.8605	0.3504	1986.59	1986.283	1	1872.1	46.7%	1	K.ILRYHAIANWTWDTPK.D	3
*	111804_single.03192.03192.2	4.215	0.3244	1604.49	1603.777	1	1221.1	75.0%	3	R.YHAIANWTWDTPK.D	2
*	111804_single.00082.00082.2	3.0717	0.3664	995.25	995.009	1	1023.5	92.9%	7	K.DDVCGICR.V	2
*	111804_single.04444.04444.3	6.0435	0.5077	3627.8	3628.771	1	1703.5	34.2%	1	K.DDVCGICRVPFDGCCPQCTSPGDNCPIVWGK.C	3
*	111804_single.03831.03831.2	4.4921	0.4276	2651.57	2652.784	1	639.6	45.5%	1	R.VPFDGCCPQCTSPGDNCPIVWGK.C	2
*	111804_single.03054.03054.3	4.7232	0.3844	3243.47	3241.509	1	1111.2	26.9%	1	K.CKHIFHAHCIQNWLATSGSQGQCPMDR.Q	3
*	111804_single.01720.01720.1	2.2148	0.3329	1338.51	1339.445	1	104.0	59.1%	1	R.QTFVVADSTNEK.S	1
*	111804_single.01664.01664.2	3.298	0.347	1339.33	1339.445	1	830.8	77.3%	5	R.QTFVVADSTNEK.S	2

YDWC_SCHPO

81.2%

9074

5.5

(O13916) Hypothetical protein C23C11.12 in chromosome I

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02158.02158.2	2.9941	0.1566	1213.79	1214.364	1	668.0	70.0%	2	R.RNPTAIQITAE.D	2
*	111804_single.04410.04410.2	6.2738	0.4918	2276.61	2277.493	1	2543.3	68.4%	2	R.RNPTAIQITAEDVLAYDEEK.L	2
*	111804_single.04383.04383.3	4.7136	0.3962	2277.14	2277.493	1	1822.3	46.1%	2	R.RNPTAIQITAEDVLAYDEEK.L	3
*	111804_single.02622.02622.1	2.1706	0.3176	1057.44	1058.177	1	471.9	72.2%	1	R.NPTAIQITAE.D	1
*	111804_single.02627.02627.2	2.7377	0.2164	1057.79	1058.177	1	1286.1	88.9%	1	R.NPTAIQITAE.D	2
*	111804_single.04831.04831.2	6.1313	0.5354	2120.91	2121.306	1	2315.4	72.2%	1	R.NPTAIQITAEDVLAYDEEK.L	2
*	111804_single.01998.01998.1	2.5257	0.3486	1081.43	1082.152	1	698.0	75.0%	1	E.DVLAYDEEK.L	1
*	111804_single.02038.02038.2	2.5604	0.2409	1081.83	1082.152	3	674.8	75.0%	2	E.DVLAYDEEK.L	2
*	111804_single.03711.03711.2	5.0678	0.4696	1949.67	1950.11	1	1588.1	68.8%	17	K.LRQTLDSESTTEEALQK.N	2
*	111804_single.02306.02306.3	4.596	0.322	1950.32	1950.11	1	984.4	46.9%	11	K.LRQTLDSESTTEEALQK.N	3
*	111804_single.02560.02560.2	4.2461	0.4518	2665.75	2666.816	1	432.2	40.9%	1	K.LRQTLDSESTTEEALQKNEESTR.L	2
*	111804_single.02554.02554.3	6.3064	0.4698	2666.33	2666.816	1	1900.3	39.8%	3	K.LRQTLDSESTTEEALQKNEESTR.L	3
*	111804_single.02230.02230.2	4.4735	0.4535	1680.27	1680.763	1	1247.7	67.9%	2	R.QTLDSESTTEEALQK.N	2
*	111804_single.00390.00390.2	3.0479	0.2526	1223.13	1223.279	1	641.9	75.0%	8	D.SESTTEEALQK.N	2
*	111804_single.03852.03852.2	3.859	0.3641	2288.85	2289.528	1	571.0	47.6%	1	R.RIGITQIFDSSMHPSQGGAAQS.-	2
*	111804_single.04610.04610.1	1.883	0.1686	1081.66	1081.211	33	277.9	44.4%	1	R.IGITQIFDSS.M	1
*	111804_single.04468.04468.2	4.98	0.5189	2133.87	2133.34	1	931.2	50.0%	1	R.IGITQIFDSSMHPSQGGAAQS.-	2

RL31_SCHPO

57.5%

113

13261

10.2

(Q9URX6) 60S ribosomal protein L31

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.00123.00123.2	3.1869	0.3377	1116.11	1116.306	1	690.5	77.8%	3	K.KSAINQVVTR.D	2
*	111804_single.01171.01171.2	3.3198	0.2945	988.25	988.132	1	1343.8	87.5%	6	K.SAINQVVTR.D	2
*	111804_single.02590.02590.1	1.8022	0.3185	813.43	813.972	61	378.1	66.7%	1	R.LYGVSFK.K	1
*	111804_single.02559.02559.2	3.3963	0.3432	1218.47	1218.482	1	1227.8	80.0%	1	R.AIKEIVAFAQK.H	2
*	111804_single.01776.01776.1	2.2358	0.2167	905.32	906.07	3	334.7	71.4%	1	K.EIVAFAQK.H	1
*	111804_single.02552.02552.3	3.6082	0.3188	1700.39	1699.947	1	586.6	48.1%	1	K.EVRVDPSLNKEVWK.R	3
*	111804_single.03712.03712.3	5.9491	0.5073	2626.7	2626.883	1	2601.0	44.3%	1	R.KRSDEDDKALYTYVQAVDVANPK.M	3
*	111804_single.03815.03815.2	2.944	0.3928	1653.09	1652.888	1	1399.2	64.3%	1	K.ALYTYVQAVDVANPK.M	2

OMT1_SCHPO

57.0%

107

12192

9.5

(O42659) Overlapping meiotic transcript protein 1

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02486.02486.2	2.7527	0.3338	969.13	969.088	1	758.1	92.9%	3	R.TFGNVFQR.L	2
*	111804_single.01287.01287.2	3.6819	0.2875	1244.15	1243.507	1	956.9	72.7%	2	R.LSMSGNPKPLAK.K	2
*	111804_single.02667.02667.3	5.6051	0.3507	2320.37	2320.839	1	1273.2	41.7%	2	R.LSMSGNPKPLAKKPLLLPEASK.A	3
*	111804_single.02107.02107.3	4.4761	0.4234	2207.69	2207.68	1	1060.2	41.2%	2	L.SMSGNPKPLAKKPLLLPEASK.A	3
*	111804_single.01690.01690.3	3.9161	0.3776	1989.92	1989.409	1	1063.1	37.5%	1	M.SGNPKPLAKKPLLLPEASK.A	3
*	111804_single.01419.01419.1	3.3306	0.3903	1095.65	1096.356	1	845.3	77.8%	1	K.KPLLLPEASK.A	1
*	111804_single.01514.01514.2	3.5146	0.3451	1096.27	1096.356	1	1325.8	88.9%	9	K.KPLLLPEASK.A	2
*	111804_single.03622.03622.1	2.2099	0.3207	1098.46	1099.234	1	316.6	71.4%	2	K.AIEFWNYR.D	1
*	111804_single.03682.03682.2	2.8244	0.2994	1098.97	1099.234	1	978.8	92.9%	4	K.AIEFWNYR.D	2
*	111804_single.01747.01747.1	3.0618	0.4223	1331.48	1332.367	6	271.2	54.5%	4	R.DVIGGEEAEQER.N	1
*	111804_single.01762.01762.2	4.4272	0.3411	1335.21	1332.367	1	1557.3	86.4%	6	R.DVIGGEEAEQER.N	2
*	111804_single.01767.01767.1	2.2737	0.2988	1117.63	1118.145	5	314.1	55.6%	1	V.IGGEEAEQER.N	1
*	111804_single.01768.01768.2	3.0952	0.3299	1118.39	1118.145	2	1080.9	83.3%	1	V.IGGEEAEQER.N	2
*	111804_single.01794.01794.1	2.1707	0.2414	1004.37	1004.986	1	311.0	62.5%	2	I.GGEEAEQER.N	1
*	111804_single.03784.03784.2	3.4498	0.1575	1367.05	1367.504	1	1440.0	90.0%	3	K.HVQQLDQLAEW.-	2
*	111804_single.03828.03828.1	1.8549	0.1107	1368.39	1367.504	3	256.0	50.0%	1	K.HVQQLDQLAEW.-	1

YFF6_SCHPO

42.5%

134

14755

11.2

(O14069) Probable 60S ribosomal protein C1687.06c

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.03030.03030.3	4.408	0.4193	2132.45	2132.387	1	1355.5	40.3%	2	K.RPEFGGIQFNREPVNVSGK.N	3
*	111804_single.00306.00306.2	2.5817	0.1303	942.33	940.995	3	514.4	78.6%	3	R.FSGLCNDK.A	2
*	111804_single.02223.02223.3	4.8565	0.4418	1921.13	1921.086	1	2514.7	50.0%	1	R.FSGLCNDKAVGVQANSPR.G	3
*	111804_single.00923.00923.2	2.7776	0.2426	1001.35	999.115	1	1661.2	88.9%	1	K.AVGVQANSPR.G	2
*	111804_single.00423.00423.2	2.8606	0.3125	932.81	933.009	1	1221.1	87.5%	3	K.DVIANASSR.K	2
*	111804_single.00111.00111.2	2.9632	0.1913	1157.83	1158.343	15	548.0	65.0%	9	R.ASAILSSQRPK.K	2

R28A_SCHPO

41.2%

148

16653

11.1

(P36585) 60S ribosomal protein L28-A (L27A) (L29)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.01639.01639.3	3.56	0.3944	1583.75	1583.746	1	959.1	50.0%	1	R.SHFDKYHPGYFGK.V	3 3
	111804_single.01618.01618.2	3.7164	0.4336	1584.19	1583.746	1	1093.0	70.8%	2	R.SHFDKYHPGYFGK.V	2 2
*	111804_single.04131.04131.2	5.3855	0.5234	2493.77	2494.85	1	1068.6	50.0%	1	R.DKYLGKNTEVAPVINVLQSGYGK.V	2
*	111804_single.04127.04127.3	5.0308	0.5099	2494.19	2494.85	1	1516.9	38.6%	1	R.DKYLGKNTEVAPVINVLQSGYGK.V	3
	111804_single.04171.04171.2	4.1269	0.5031	1789.29	1790.026	1	1285.9	71.9%	2	K.NTEVAPVINVLQSGYGK.V	2 2
*	111804_single.02470.02470.3	4.7242	0.3382	1466.78	1466.724	1	2165.1	60.4%	2	K.GRLPETPVIVQTR.Y	3
*	111804_single.02426.02426.2	4.2941	0.4666	1466.81	1466.724	1	2233.2	83.3%	2	K.GRLPETPVIVQTR.Y	2
	111804_single.03158.03158.1	1.9644	0.0897	1197.58	1198.448	147	187.1	40.9%	1	K.IKQAGGVVELIA.-	1 1
	111804_single.03150.03150.2	2.7043	0.1331	1198.65	1198.448	3	884.3	68.2%	1	K.IKQAGGVVELIA.-	2 2

Similarities: R28B_SCHPO(5:4)

RL35_SCHPO

38.5%

122

14302

10.7

(O74904) 60S ribosomal protein L35

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.01814.01814.2	2.5662	0.1575	978.23	978.18	1	777.2	85.7%	1	M.ALKTFELR.K	2
*	111804_single.03280.03280.2	4.8913	0.4405	1814.41	1814.993	1	2285.3	78.6%	2	R.KQSQENLAEQLQELR.Q	2
*	111804_single.03176.03176.3	4.551	0.2223	1815.5	1814.993	6	1488.3	46.4%	2	R.KQSQENLAEQLQELR.Q	3
*	111804_single.03771.03771.2	3.8766	0.4027	1686.21	1686.819	1	975.0	65.4%	2	K.QSQENLAEQLQELR.Q	2
*	111804_single.03776.03776.3	4.8515	0.2385	1689.56	1686.819	4	1624.6	55.8%	1	K.QSQENLAEQLQELR.Q	3
*	111804_single.02134.02134.1	2.1576	0.0996	1158.61	1159.328	8	204.1	61.1%	1	R.ILTVINESNR.L	1
*	111804_single.02022.02022.2	3.4958	0.2755	1158.89	1159.328	1	1451.9	94.4%	4	R.ILTVINESNR.L	2
*	111804_single.02796.02796.2	2.9991	0.2045	1570.29	1570.833	5	524.3	50.0%	1	R.ILTVINESNRLAAR.E	2
*	111804_single.00658.00658.2	3.7857	0.4085	1221.25	1221.359	1	904.7	83.3%	6	R.RALTPYEQSR.K	2

R28B_SCHPO

37.2%

148

16685

11.1

(P57728) 60S ribosomal protein L28-B

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.01639.01639.3	3.56	0.3944	1583.75	1583.746	1	959.1	50.0%	1	R.SHFDKYHPGYFGK.V	3 3
	111804_single.01618.01618.2	3.7164	0.4336	1584.19	1583.746	1	1093.0	70.8%	2	R.SHFDKYHPGYFGK.V	2 2
	111804_single.04171.04171.2	4.1269	0.5031	1789.29	1790.026	1	1285.9	71.9%	2	K.NTEVAPVINVLQSGYGK.V	2 2
*	111804_single.02820.02820.3	3.5398	0.2402	1466.21	1466.724	1	1115.1	47.9%	1	K.GRLPDTPVIIQTR.Y	3
*	111804_single.02810.02810.2	2.8286	0.1067	1467.73	1466.724	8	406.8	54.2%	1	K.GRLPDTPVIIQTR.Y	2
	111804_single.03158.03158.1	1.9644	0.0897	1197.58	1198.448	147	187.1	40.9%	1	K.IKQAGGVVELIA.-	1 1
	111804_single.03150.03150.2	2.7043	0.1331	1198.65	1198.448	3	884.3	68.2%	1	K.IKQAGGVVELIA.-	2 2

Similarities: R28A_SCHPO(5:2)

U	R36A_SCHPO	6	10	36.4%	99	11263	11.8	(Q92365) 60S ribosomal protein L36-A
U	R36B_SCHPO	6	10	36.4%	99	11258	11.8	(O94658) 60S ribosomal protein L36-B

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
111804_single.02336.02336.2	3.0616	0.246	967.95	968.184	1	1207.4	88.9%	1	M.APGLVVGLNK.G	2
111804_single.01667.01667.2	3.6897	0.4476	1153.19	1153.41	1	1416.9	86.4%	5	M.APGLVVGLNKGK.V	2
111804_single.02371.02371.1	2.1624	0.2875	1139.52	1139.253	8	125.5	55.6%	1	R.EVAGFAPYER.R	1
111804_single.03452.03452.2	4.296	0.3688	1547.15	1547.749	1	1340.6	73.1%	1	K.GKIEELTSVIQSSR.L	2
111804_single.03455.03455.3	4.445	0.3905	1548.23	1547.749	2	1010.5	46.2%	1	K.GKIEELTSVIQSSR.L	3
111804_single.03175.03175.2	2.5701	0.3322	1362.53	1362.523	1	522.7	86.4%	1	K.IEELTSVIQSSR.L	2

Q9HGL8

30.9%

10422

10.8

(Q9HGL8) 60s ribosomal protein L37a/L43A

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.01715.01715.2	2.7953	0.3211	1237.99	1238.318	2	469.3	60.0%	1	R.TAAGIWCCNGK.G	2
*	111804_single.03546.03546.2	4.5401	0.6187	1703.89	1704.924	1	1657.7	64.7%	1	K.VLAGGAWTVTTAAATSAR.S	2

O42914

28.5%

284

30949

10.1

(O42914) Hypothetical 30.9 kDa protein C16A3.08C in chromosome II

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.00159.00159.2	2.6594	0.1804	1091.49	1092.194	4	690.8	77.8%	2	R.ELVAQSTTSR.K	2
*	111804_single.04416.04416.3	5.0093	0.3246	3639.8	3640.769	1	918.3	24.3%	1	R.GWGDLVNSAANPDVAENEGNTPSGAQTPAAEEENVK.T	3
*	111804_single.02775.02775.1	2.004	0.1387	1125.52	1126.208	2	276.3	62.5%	1	K.TLDEYLSER.K	1
*	111804_single.02766.02766.2	3.1484	0.3518	1126.63	1126.208	1	925.7	93.8%	1	K.TLDEYLSER.K	2
*	111804_single.03687.03687.2	3.4203	0.4901	2701.59	2701.95	1	288.9	32.0%	1	R.RGPSETASKTQQAPPTLSETDFPALA.-	2

RS14_SCHPO

24.5%

139

14699

10.7

(O14150) 40S ribosomal protein S14

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.01487.01487.3	4.1075	0.2852	1995.47	1996.277	1	1404.7	40.0%	1	K.IRATGGTATKTPGPGAQAALR.A	3
*	111804_single.02584.02584.2	3.3739	0.2633	1443.81	1444.582	1	880.0	75.0%	1	R.IEDVTPIPTDSTR.R	2

G3P1_SCHPO

23.2%

336

35870

6.7

(P78958) Glyceraldehyde 3-phosphate dehydrogenase 1 (EC 1.2.1.12) (GAPDH)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.01915.01915.2	3.0596	0.2641	819.91	819.939	1	806.8	85.7%	1	K.VGINGFGR.I	2
*	111804_single.02874.02874.3	5.2329	0.385	1865.78	1866.041	1	1291.2	42.2%	1	K.DGKLVIDGNAIDVHNER.D	3
	111804_single.02686.02686.2	4.2949	0.4088	1820.31	1821.013	1	885.7	59.4%	2	K.VISNASCTTNCLAPLAK.V	2
	111804_single.01360.01360.2	4.5238	0.4353	1615.05	1615.787	1	588.9	58.8%	3	R.GGRGASANIIPSSTGAAK.A	2
	111804_single.01979.01979.3	3.6562	0.3132	1971.23	1971.224	3	501.8	32.1%	1	R.GGRGASANIIPSSTGAAKAVGK.V	3
	111804_single.01864.01864.2	2.7801	0.1515	1344.39	1345.495	2	577.4	57.1%	3	R.GASANIIPSSTGAAK.A	2
	111804_single.04090.04090.2	3.3327	0.5268	1469.55	1469.718	1	682.5	61.5%	1	R.VPTPDVSVVDLTVK.L	2

O94688

22.8%

136

15786

3.9

(O94688) Hypothetical protein

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02992.02992.2	2.5683	0.166	1556.61	1558.772	1	903.7	70.8%	1	K.EEVRLETQELAIK.Q	2
*	111804_single.02235.02235.2	2.8154	0.2132	1044.95	1045.221	4	625.2	87.5%	1	R.LETQELAIK.Q	2
*	111804_single.03824.03824.2	4.2731	0.4706	1680.23	1680.944	1	1682.1	76.9%	2	R.LETQELAIKQFGFR.T	2
*	111804_single.02758.02758.2	4.6316	0.3287	1635.33	1635.743	1	1704.1	79.2%	4	R.SMQEQLDLEEQER.E	2

RS30_SCHPO

21.3%

6910

11.7

(O42952) 40S ribosomal protein S30

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02304.02304.2	4.003	0.3835	1322.33	1322.568	1	1383.1	77.3%	1	R.RFVNVTNMVGGK.R	2
*	111804_single.02846.02846.2	2.6896	0.2906	1165.89	1166.381	1	1016.0	80.0%	2	R.FVNVTNMVGGK.R	2
*	111804_single.02375.02375.2	2.8789	0.2239	1322.19	1322.568	1	1146.9	68.2%	1	R.FVNVTNMVGGKR.R	2

R19A_SCHPO

20.1%

144

16150

9.7

(P58234) 40S ribosomal protein S19-A (S16-A)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.03323.03323.2	4.3146	0.3787	2211.65	2212.426	1	992.9	58.8%	1	K.TGTHKELAPYDPDWYYVR.A	2
	111804_single.03319.03319.3	4.1533	0.318	2211.77	2212.426	1	1348.5	44.1%	1	K.TGTHKELAPYDPDWYYVR.A	3
	111804_single.04255.04255.2	2.6132	0.335	1687.67	1687.849	1	723.8	70.8%	1	K.ELAPYDPDWYYVR.A	2
*	111804_single.03606.03606.1	2.2581	0.172	1282.45	1283.375	19	320.4	45.0%	1	R.IAYSLLEEESE.-	1
*	111804_single.03611.03611.2	3.019	0.1597	1282.89	1283.375	3	957.7	75.0%	1	R.IAYSLLEEESE.-	2

O74358

20.0%

135

15628

5.3

(O74358) Hypothetical protein

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02327.02327.2	3.3443	0.3375	1313.17	1313.453	1	1407.4	80.0%	3	K.DRLPVDDVEVR.V	2
*	111804_single.02402.02402.3	3.7434	0.3502	1313.78	1313.453	2	1362.4	60.0%	2	K.DRLPVDDVEVR.V	3
*	111804_single.03859.03859.2	3.8746	0.3811	1570.35	1570.653	1	1375.0	79.2%	1	K.NTIEDNFETDPFK.S	2
*	111804_single.03747.03747.2	4.3125	0.381	1884.49	1885.037	1	1168.0	70.0%	1	K.NTIEDNFETDPFKSVK.E	2

NUC2_SCHPO

19.8%

665

76171

7.9

(P10505) Nuclear scaffold-like protein p76

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02406.02406.2	2.8112	0.2319	1431.99	1431.545	1	530.9	70.8%	2	R.SIQPNINDSISSR.G	2
*	111804_single.03335.03335.2	3.663	0.4093	1678.19	1677.852	1	672.7	60.0%	1	K.SQTNATASVPEPSFLK.K	2
*	111804_single.02858.02858.2	3.9609	0.4135	1805.43	1806.026	1	626.4	59.4%	4	K.SQTNATASVPEPSFLKK.S	2
*	111804_single.00862.00862.2	3.0049	0.4304	1461.05	1461.525	1	740.0	61.5%	1	K.SKESSSSSNKFSVS.E	2
*	111804_single.00291.00291.2	2.5873	0.3739	1245.93	1246.273	5	432.9	50.0%	1	K.ESSSSSNKFSVS.E	2
*	111804_single.03570.03570.2	4.3937	0.5838	1806.61	1806.924	1	1051.4	59.4%	2	S.ESIANSYSNSSISAFTK.W	2
*	111804_single.01654.01654.2	3.6232	0.3838	1131.81	1132.213	1	1277.5	90.0%	3	R.VDASELPGSEK.E	2
*	111804_single.02687.02687.3	5.543	0.4248	2715.98	2716.026	1	1111.8	32.6%	1	R.HQSLKLQSQSQTSKNLLAFNDAQK.A	3
*	111804_single.02596.02596.1	3.0426	0.3479	1133.45	1134.277	1	591.2	77.8%	1	K.NLLAFNDAQK.A	1
*	111804_single.02594.02594.2	3.0264	0.2027	1133.97	1134.277	1	1251.1	83.3%	1	K.NLLAFNDAQK.A	2
*	111804_single.02680.02680.3	3.7197	0.3024	2336.66	2336.523	3	486.8	30.0%	1	K.NLLAFNDAQKADSNNRDTSLK.S	3
*	111804_single.01756.01756.2	3.5451	0.362	1278.21	1278.326	1	1460.3	88.9%	1	R.NDQADFHFQR.A	2
*	111804_single.03782.03782.2	3.2262	0.3883	1596.87	1595.839	1	576.2	57.1%	1	K.AIAPDEANVHFLLGK.I	2

RL26_SCHPO

19.8%

126

14341

11.2

(P78946) 60S ribosomal protein L26

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.01343.01343.2	2.5768	0.184	1116.99	1116.263	1	1251.2	87.5%	1	R.RDDQITVIR.G	2
*	111804_single.01939.01939.2	3.0732	0.2665	959.81	960.075	2	1075.5	92.9%	1	R.DDQITVIR.G	2
*	111804_single.01156.01156.2	4.2855	0.4078	1515.21	1515.663	1	1187.8	70.0%	1	R.EKANGASAPVGIDASK.V	2
*	111804_single.01356.01356.2	3.1325	0.43	1257.77	1258.374	1	461.2	61.5%	1	K.ANGASAPVGIDASK.V	2

R17B_SCHPO

18.2%

132

15534

10.1

(Q9P7J6) 40S ribosomal protein S17-B

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.03167.03167.2	4.2879	0.3709	1158.41	1158.381	1	1141.6	90.0%	1	R.IVDEVAIIASK.R	2 2
	111804_single.02880.02880.2	2.9615	0.4045	1314.73	1314.568	1	1329.1	72.7%	2	R.IVDEVAIIASKR.L	2 2
*	111804_single.03547.03547.2	2.6359	0.2143	1436.45	1436.558	1	593.0	72.7%	1	K.DQYVPEVSELEK.D	2

Similarities: R17A_SCHPO(2:1)

RS29_SCHPO

18.2%

6526

10.7

(O74329) 40S ribosomal protein S29

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02659.02659.1	2.0679	0.2733	1155.43	1156.28	1	179.2	61.1%	1	R.EYANDIGFVK.Y	1
*	111804_single.02655.02655.2	2.6064	0.322	1155.91	1156.28	2	485.7	61.1%	1	R.EYANDIGFVK.Y	2

RL13_SCHPO

16.8%

208

23529

10.7

(O74175) 60S ribosomal protein L13

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02408.02408.2	2.68	0.1149	1220.91	1221.399	8	686.2	70.0%	1	R.AGRGFTLEELK.A	2
*	111804_single.02074.02074.2	2.5737	0.2893	1265.09	1265.455	1	546.6	63.6%	1	R.VASTIGIPVDHR.R	2
*	111804_single.03246.03246.2	4.1684	0.4124	1400.37	1400.491	1	1303.9	81.8%	2	K.NFNAFSTLSNER.A	2

R17A_SCHPO

16.8%

131

15514

10.3

(O42984) 40S ribosomal protein S17-A

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.03167.03167.2	4.2879	0.3709	1158.41	1158.381	1	1141.6	90.0%	1	R.IVDEVAIIASK.R	2 2
	111804_single.02880.02880.2	2.9615	0.4045	1314.73	1314.568	1	1329.1	72.7%	2	R.IVDEVAIIASKR.L	2 2
*	111804_single.02835.02835.2	2.6584	0.2142	1147.87	1148.304	1	829.8	77.8%	1	K.SLGYDQIPVR.V	2

Similarities: R17B_SCHPO(2:1)

RL2_SCHPO

15.4%

253

27100

10.9

(P08093) 60S ribosomal protein L2 (K5) (K37) (KD4)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.00132.00132.2	2.6813	0.2799	1075.09	1074.184	2	482.8	77.8%	2	K.SGGIFQAHTR.L	2
*	111804_single.02239.02239.2	2.6591	0.2196	1318.55	1316.451	1	646.3	63.6%	1	M.PEGTIISNVEEK.A	2
*	111804_single.03028.03028.2	4.3589	0.4836	1761.31	1761.929	1	1837.7	71.9%	1	R.SSGNYVIIVGHDVDTGK.T	2

U	R38A_SCHPO	2	2	14.9%	74	8492	10.2	(Q9USR7) 60S ribosomal protein L38-1
U	R38B_SCHPO	2	2	14.9%	74	8339	10.5	(Q09900) 60S ribosomal protein L38-2

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.03568.03568.1	2.53	0.3245	1255.52	1256.484	1	861.3	60.0%	1	K.YLYTLVVADAK.K	1
	111804_single.03567.03567.2	3.9517	0.4577	1255.61	1256.484	1	1210.4	85.0%	1	K.YLYTLVVADAK.K	2

U	O74884	2	2	14.1%	149	16912	11.7	(O74884) 60S ribosomal protein
U	Q92354	2	2	14.1%	149	16837	11.5	(Q92354) 60S ribosomal protein L24

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.01995.01995.2	3.0801	0.2277	1358.47	1359.546	1	1005.3	72.7%	1	-.MKVEVCSFSGSK.V	2
	111804_single.03110.03110.2	2.7269	0.3044	1194.71	1194.422	1	918.6	81.2%	1	R.RLSWTVLYR.R	2

U	R37A_SCHPO	1	10	13.6%	88	9829	11.5	(P59289) 60S ribosomal protein L37-A (L37-1)
U	R37B_SCHPO	1	10	13.3%	90	9955	11.5	(P05733) 60S ribosomal protein L37-B (L37-2) (YL27)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.00558.00558.2	3.7451	0.5005	1345.85	1346.378	1	1275.3	77.3%	10	K.STCACCGYPAAK.T	2

CU23_SCHPO

10.6%

565

65855

5.4

(O94556) 20S cyclosome/APC complex protein cut23 (Anaphase promoting factor component 8)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02407.02407.2	3.8568	0.2999	1358.53	1359.436	1	1078.6	77.3%	1	M.GVDGLEDQEQLR.E	2
*	111804_single.03440.03440.2	3.378	0.3539	1360.21	1360.553	1	896.2	72.7%	2	K.LAEAEIIFPNSR.Y	2
*	111804_single.00303.00303.2	2.7083	0.3443	1161.97	1162.247	1	1089.7	77.8%	1	K.NTHAAIESYR.L	2
*	111804_single.03243.03243.2	3.9433	0.3991	1459.27	1459.686	1	1756.6	76.9%	3	R.ALLGSQTNSSILVR.L	2
*	111804_single.02231.02231.2	3.8276	0.2193	1376.77	1377.488	1	1075.7	72.7%	1	K.TEETEISPETIK.A	2

RL8_SCHPO

8.9%

258

28475

10.4

(O13672) 60S ribosomal protein L8 (L7A) (L4)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02642.02642.2	3.4248	0.3985	1190.81	1190.341	1	875.3	80.0%	1	R.SFGIGQDIQPK.R	2
*	111804_single.02282.02282.2	3.4646	0.39	1171.99	1172.324	1	1694.8	86.4%	1	R.LVAEAEAVANGK.S	2

RS13_SCHPO

8.7%

150

16822

10.4

(P28189) 40S ribosomal protein S13

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02390.02390.2	3.579	0.3039	1319.07	1319.547	1	1194.9	66.7%	1	K.GKGIASSALPYVR.S	2
*	111804_single.02920.02920.2	2.8911	0.3148	1135.39	1134.321	1	467.7	65.0%	1	K.GIASSALPYVR.S	2

RL4A_SCHPO

8.0%

363

39767

10.8

(P35679) 60S ribosomal protein L4-A (L2)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	111804_single.00491.00491.2	3.6129	0.4361	1446.41	1445.491	1	1445.2	73.1%	5	K.AGHQTSAESWGTGR.A	2
*	111804_single.00750.00750.2	3.9158	0.4014	1634.69	1633.932	1	1310.7	64.3%	3	K.AYKANVKLNTGKTPK.A	2

YCO6_SCHPO

7.9%

393

44348

4.6

(O59797) Putative nucleosome assembly protein C364.06

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.03550.03550.2	6.1022	0.5955	2128.73	2129.242	1	2209.1	68.4%	1	K.APQVNTIDEGDENLEAIDGK.L	2
*	111804_single.01256.01256.2	2.8064	0.1194	1218.35	1218.26	8	501.4	70.0%	1	R.GADEPTEEEIK.K	2

U	EF11_SCHPO	4	11	7.8%	460	49661	9.0	(P50522) Elongation factor 1-alpha-A (EF-1-alpha-A)
U	EF12_SCHPO	4	11	7.8%	460	49675	9.0	(Q10119) Elongation factor 1-alpha-B/C (EF-1-alpha-B/C)

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
111804_single.02131.02131.3	4.136	0.3954	1532.0	1531.755	1	1493.7	46.4%	1	K.GHINVVVIGHVDSGK.S	3
111804_single.02210.02210.2	2.8625	0.3012	1532.87	1531.755	1	401.4	50.0%	1	K.GHINVVVIGHVDSGK.S	2
111804_single.00544.00544.2	3.0377	0.3859	1123.85	1121.279	1	915.8	72.2%	7	K.STTTGHLIYK.C	2
111804_single.02323.02323.2	2.6851	0.2721	1026.51	1026.224	6	683.8	70.0%	2	K.IGGIGTVPVGR.V	2

CUT9_SCHPO

7.0%

671

75889

5.9

(P41889) Protein cut9

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02126.02126.3	3.9654	0.3725	1718.36	1717.986	1	1595.2	52.1%	1	R.LWRHDALMQQQYK.C	3
*	111804_single.03383.03383.2	2.5259	0.3233	1596.73	1595.75	118	137.1	57.7%	1	R.RAEDYLSSINGLEK.S	2
*	111804_single.01186.01186.2	3.0206	0.2977	1052.63	1053.16	1	1104.8	81.2%	3	R.TQVLYADSR.S	2
*	111804_single.01448.01448.2	3.5399	0.4722	1261.93	1262.276	1	1470.0	85.0%	1	M.DDIEGNVSEQR.-	2

ANC5_SCHPO

3.5%

737

85316

5.7

(Q9P4W7) Anaphase promoting factor component 5 (APC5) (Cyclosome subunit 5)

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.03144.03144.2	4.4826	0.3061	1567.23	1567.655	1	2010.1	83.3%	2	K.NENDDQILEHLAR.N	2
*	111804_single.02803.02803.2	3.2813	0.3639	1576.49	1576.715	1	502.6	66.7%	1	D.PALQPNIEQYCSR.F	2

Q874R3

2.8%

681

78743

5.3

(Q874R3) Anaphase-promoting complex (APC ) (PMID 12477395), required for cyclin degradation, possibly required for metaphase-anaphase transition, cullin family, similar to S. cerevisiae APC2

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02547.02547.2	2.8662	0.3741	1258.95	1259.315	1	983.3	77.8%	1	K.ELDAYAEEYR.E	2
*	111804_single.01324.01324.2	3.4219	0.3625	984.57	985.125	1	1454.0	93.8%	1	K.AAELLDQPK.E	2

YDF3_SCHPO

2.6%

1403

154034

9.2

(Q10475) Probable eukaryotic initiation factor C17C9.03

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02650.02650.2	4.7516	0.4543	2162.17	2162.275	1	997.5	52.5%	1	R.SGSQVSDQVVESPNSSTLSPR.N	2
*	111804_single.02228.02228.2	3.3698	0.4275	1510.69	1510.56	1	1202.3	63.3%	1	R.GFSSSGAGFGSGSNYK.S	2

CU20_SCHPO

2.5%

719

82605

6.0

(O42839) 20S cyclosome/APC complex protein cut20

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02838.02838.2	2.6885	0.1707	1209.11	1209.304	3	940.5	81.2%	1	K.FEWINETNR.V	2
*	111804_single.03219.03219.2	2.8377	0.3215	1080.09	1079.244	1	1145.8	75.0%	1	K.AIAQFFEPR.K	2

CUT4_SCHPO

1.9%

1458

165411

6.7

(Q9URV2) Cut4 protein

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	111804_single.02111.02111.2	3.5087	0.3298	1522.29	1522.655	1	797.8	70.8%	1	R.SRFIDPESDQSIK.S	2
*	111804_single.02130.02130.3	3.8309	0.2489	1523.24	1522.655	2	1071.1	52.1%	1	R.SRFIDPESDQSIK.S	3
*	111804_single.01856.01856.3	4.419	0.4384	1852.94	1852.999	1	1161.8	40.0%	1	R.SRFIDPESDQSIKSSR.N	3
*	111804_single.01856.01856.2	2.8107	0.3445	1235.63	1234.309	5	744.6	65.0%	1	D.PESDQSIKSSR.N	3
*	111804_single.00140.00140.2	2.9732	0.3149	1265.29	1265.325	1	1011.5	80.0%	3	R.SDSIHYTANTR.L	2

	Proteins	Peptide IDs	Copies
Unfiltered	3566	7456	9636
Redundant	44	188	364
Nonredundant	39	181	354

/data/1/edwinr/Data/Gould