D re_dta

738

83973

5.0

DEF1 SGDID:S000001537, Chr XI from 338397-336181, reverse complement, Verified ORF, "RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12914.12914.3	5.3712	0.3576	100.0%	2839.8843	2837.221	1	6.569	35.4%	12	K.HDVPQDSNDNNNEELEAQGQQAQEK.N	3
*	22_g_01_itms.14011.14011.3	4.6478	0.3005	100.0%	3821.0645	3814.7517	7	5.65	20.3%	7	K.EQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEK.V	3

YMR186W

705

80900

4.8

HSC82 SGDID:S000004798, Chr XIII from 632354-634471, Verified ORF, "Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels that HSP82 and induced 2-3 fold by heat shock"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11763.11763.2	5.2191	0.3995	100.0%	1998.2722	1997.9344	1	7.93	71.9%	1	K.LIEAFNEIAEDSEQFDK.F	2
*	22_g_01_itms.13098.13098.3	3.0143	0.0857	92.9%	4221.1143	4216.8867	2	3.93	18.4%	1	R.LISLGLNIDEDEETETAPEASTEAPVEEVPADTEMEEVD.-	3
*	22_g_01_itms.09717.09717.3	3.9508	0.2686	100.0%	3795.0544	3790.6023	6	5.768	18.4%	1	L.GLNIDEDEETETAPEASTEAPVEEVPADTEMEEVD.-	3

YMR268C

444

50849

9.3

PRP24 SGDID:S000004881, Chr XIII from 804221-802887, reverse complement, Verified ORF, "Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23680.23680.3	3.3015	0.1117	91.7%	4017.7144	4023.897	222	3.863	17.6%	1	L.LDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCA.F	3

YNL330C

433

48904

5.5

RPD3 SGDID:S000005274, Chr XIV from 19302-18001, reverse complement, Verified ORF, "Histone deacetylase; regulates transcription and silencing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21105.21105.3	3.1504	0.1386	98.7%	3688.7043	3684.6304	180	4.404	18.9%	1	Q.PSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNY.V	3

Reverse_YKR053C

404

46488

7.7

YSR3 SGDID:S000001761, Chr XI from 534923-533709, reverse complement, Verified ORF, "Dihydrosphingosine 1-phosphate phosphatase, membrane protein involved in sphingolipid metabolism; has similarity to Lcb3p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25593.25593.3	3.3248	0.2139	91.6%	3733.3743	3728.7034	24	3.859	21.8%	1	Y.RETLWDSCDLGSVVGIFAVSDEFCPCEDIPRV.H	3

U	YDR385W	4	8	7.8%	842	93289	6.3	EFT2 SGDID:S000002793, Chr IV from 1243220-1245748, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin"
U	YOR133W	4	8	7.8%	842	93289	6.3	EFT1 SGDID:S000005659, Chr XV from 575098-577626, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
22_g_01_itms.06822.06822.2	5.2609	0.4309	100.0%	1980.0122	1977.9227	1	7.48	73.5%	2	R.AEQLYEGPADDANCIAIK.N	2
22_g_01_itms.03073.03073.2	4.6191	0.4455	100.0%	1496.4321	1495.7128	1	7.692	76.9%	2	R.ETVESESSQTALSK.S	2
22_g_01_itms.13862.13862.2	3.6411	0.107	96.4%	2180.632	2179.1248	14	4.676	42.1%	1	K.AEPIDEEVSLAIENGIINPR.D	2
22_g_01_itms.08473.08473.2	4.5948	0.3859	100.0%	1628.1322	1627.7063	1	8.171	88.5%	3	R.IMADDYGWDVTDAR.K	2

YGR234W

7.8%

399

44646

6.3

YHB1 SGDID:S000003466, Chr VII from 959908-961107, Verified ORF, "Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role in the oxidative and nitrosative stress responses"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25035.25035.3	3.8424	0.2562	98.3%	3349.7644	3347.705	14	4.337	23.3%	1	K.EVLGDAATPEIINAWGEAYQAIADIFITVEK.K	3

Reverse_YFR004W

7.8%

306

34398

6.2

RPN11 SGDID:S000001900, Chr VI from 153388-154308, Verified ORF, "Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.32305.32305.3	3.3009	0.1784	97.4%	2669.2744	2671.3625	10	5.028	28.3%	1	R.FADIVVKGKVSQIPDVVVAVARSN.L	3

YPR108W

429

48959

5.2

RPN7 SGDID:S000006312, Chr XVI from 742452-743741, Verified ORF, "Essential, non-ATPase regulatory subunit of the 26S proteasome, similar to another S. cerevisiae regulatory subunit, Rpn5p, as well as to mammalian proteasome subunits"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.17201.17201.3	5.5509	0.2528	100.0%	3228.7744	3226.4705	1	5.608	27.8%	2	K.LEEDDEGELEQAQAWINLGEYYAQIGDK.D	3
*	22_g_01_itms.18239.18239.3	6.0973	0.4024	100.0%	3785.5745	3783.7148	1	7.216	31.2%	22	K.LEEDDEGELEQAQAWINLGEYYAQIGDKDNAEK.T	3

Reverse_YPR023C

401

45203

8.3

EAF3 SGDID:S000006227, Chr XVI from 610028-608823, reverse complement, Verified ORF, "Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35443.35443.3	2.4428	0.1791	94.1%	3770.2144	3768.8916	296	4.057	20.0%	1	Q.LRELRYLLMNGLCKDFYLKLGACYESLQSQS.G	3

YCR012W

416

44738

7.6

PGK1 SGDID:S000000605, Chr III from 137743-138993, Verified ORF, "3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10790.10790.2	3.6051	0.1432	95.8%	1963.3722	1962.9482	46	4.564	44.1%	1	K.DVTFLNDCVGPEVEAAVK.A	2
*	22_g_01_itms.08489.08489.2	4.1591	0.3041	100.0%	1579.7122	1579.7855	1	7.181	69.2%	1	K.VLENTEIGDSIFDK.A	2

YKL193C

338

38887

5.5

SDS22 SGDID:S000001676, Chr XI from 79887-78871, reverse complement, Verified ORF, "Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1), functions positively with Glc7p to promote dephosphorylation of nuclear substrates required for chromosome transmission during mitosis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09539.09539.3	2.8881	0.1446	90.8%	2937.5344	2940.4744	130	3.835	23.0%	1	T.DIWASFNKIDQSFESLGENLSALSRL.E	3

Reverse_YMR081C

338

37110

8.8

ISF1 SGDID:S000004686, Chr XIII from 431094-430078, reverse complement, Verified ORF, "Serine-rich, hydrophilic protein with similarity to Mbr1p; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14741.14741.3	3.109	0.2212	92.0%	2821.2244	2822.296	236	4.788	23.0%	1	S.SAVSTNLSSNSPSKVLS*NSYSNNRTQ.L	3

Reverse_YNL283C

7.6%

503

52292

7.0

WSC2 SGDID:S000005227, Chr XIV from 106695-105184, reverse complement, Verified ORF, "Partially redundant sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway involved in maintenance of cell wall integrity and recovery from heat shock; secretory pathway Wsc2p is required for the arrest of secretion response"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.28907.28907.3	3.2959	0.1947	95.5%	3842.9343	3837.876	265	4.904	16.9%	1	A.GGSLGKSKSS*SSKGNLLSSTSSSTSSVTAYVSTRTTFI.T	3

U	YGR254W	1	1	7.6%	437	46816	6.6	ENO1 SGDID:S000003486, Chr VII from 1000932-1002245, Verified ORF, "Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is repressed in response to glucose"
U	YHR174W	1	1	7.6%	437	46914	6.0	ENO2 SGDID:S000001217, Chr VIII from 451327-452640, Verified ORF, "Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is induced in response to glucose"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	22_g_01_itms.21007.21007.3	4.6397	0.3464	100.0%	3258.2344	3257.6177	1	6.03	26.6%	1	R.YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A	3

Reverse_YER039C

7.6%

249

27688

8.5

HVG1 SGDID:S000000841, Chr V from 229204-228455, reverse complement, Verified ORF, "Protein of unknown function, has homology to Vrg4p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08667.08667.3	2.9513	0.0863	93.0%	2267.5745	2266.2197	9	3.957	31.9%	1	S.LNKTSWDEMIFSFVLLLPL.A	3

YCL043C

7.5%

522

58227

4.5

PDI1 SGDID:S000000548, Chr III from 50221-48653, reverse complement, Verified ORF, "Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, essential for the formation of disulfide bonds in secretory and cell-surface proteins, unscrambles non-native disulfide bonds"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.13482.13482.2	4.4146	0.4101	100.0%	1940.8722	1940.913	1	7.895	59.4%	3	K.YGLPQLSEEAFDELSDK.I	2
*	22_g_01_itms.10763.10763.3	3.8473	0.305	100.0%	2342.5444	2341.9795	1	6.461	39.3%	2	K.AAEEADADAELADEEDAIHDEL.-	3
*	22_g_01_itms.10733.10733.2	6.5992	0.4382	100.0%	2346.5322	2341.9795	1	8.499	64.3%	9	K.AAEEADADAELADEEDAIHDEL.-	2
*	22_g_01_itms.09912.09912.2	3.7012	0.3831	100.0%	1871.2522	1870.7831	1	6.325	53.1%	2	A.DADAELADEEDAIHDEL.-	2

YLR457C

7.5%

319

37354

10.2

NBP1 SGDID:S000004449, Chr XII from 1056768-1055809, reverse complement, Verified ORF, "Component of the mitotic apparatus containing a coiled-coil domain, essential for the G2/M transition"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09291.09291.2	3.2457	0.2822	100.0%	2805.1921	2804.2424	1	6.231	37.0%	2	R.DGNIPEMQPLQENISPACPT*PPYR.S	2
*	22_g_01_itms.09335.09335.3	5.8758	0.3333	100.0%	2806.8245	2804.2424	2	5.994	40.2%	2	R.DGNIPEMQPLQENISPACPT*PPYR.S	3

U	YMR169C	1	1	7.3%	506	55385	5.7	ALD3 SGDID:S000004779, Chr XIII from 600871-599351, reverse complement, Verified ORF, "Cytoplasmic aldehyde dehydrogenase, involved in beta-alanine synthesis; uses NAD+ as the preferred coenzyme; very similar to Ald2p; expression is induced by stress and repressed by glucose"
U	YMR170C	1	1	7.3%	506	55188	5.6	ALD2 SGDID:S000004780, Chr XIII from 603081-601561, reverse complement, Verified ORF, "Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis; uses NAD+ as the preferred coenzyme; expression is stress induced and glucose repressed; very similar to Ald3p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	22_g_01_itms.25897.25897.3	3.09	0.1564	98.6%	4054.5244	4053.0684	2	4.464	20.1%	1	I.FGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVK.K	3

YJL108C

7.3%

383

41488

8.0

PRM10 SGDID:S000003644, Chr X from 218773-217622, reverse complement, Verified ORF, "Pheromone-regulated protein, predicted to have 5 transmembrane segments"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09421.09421.3	2.9954	0.2021	94.6%	2833.1943	2829.4746	351	4.084	22.2%	1	I.FVQVPSGIASQNSLLSGLQSANTIVNAN.E	3

YDL211C

7.3%

372

40752

5.5

YDL211C SGDID:S000002370, Chr IV from 80413-79295, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.16160.16160.3	2.8996	0.0644	93.3%	2788.5244	2785.6455	56	3.986	23.1%	1	A.NNRRTGVIVGSTVGVVIGVVIVIFIGF.I	3

YPL262W

7.2%

488

53152

8.2

FUM1 SGDID:S000006183, Chr XVI from 47336-48802, Verified ORF, "Fumarase, converts fumaric acid to L-malic acid in the TCA cycle; cytosolic and mitochondrial localization determined by the N-terminal mitochondrial targeting sequence and protein conformation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33657.33657.3	2.919	0.1615	95.1%	3612.4443	3618.9746	135	4.13	19.1%	1	S.LKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKE.T	3

YNL178W

7.1%

240

26503

9.4

RPS3 SGDID:S000005122, Chr XIV from 302682-303404, Verified ORF, "Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.05349.05349.2	3.8893	0.3271	100.0%	1906.5922	1904.8514	1	5.947	65.6%	4	K.DYRPAEETEAQAEPVEA.-	2

YFL010C

7.1%

211

22655

4.5

WWM1 SGDID:S000001884, Chr VI from 115737-115102, reverse complement, Verified ORF, "WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes Gi phase growth arrest and clonal death that is suppressed by overexpression of MCA1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.32666.32666.3	2.8974	0.259	100.0%	1560.9543	1563.6481	16	5.476	39.3%	1	Q.AYYGTAPSTSKGS*GH.G	3

YHR075C

7.0%

400

44888

7.1

PPE1 SGDID:S000001117, Chr VIII from 249643-248441, reverse complement, Verified ORF, "Protein with carboxyl methyl esterase activity that may have a role in demethylation of the phosphoprotein phosphatase catalytic subunit; also identified as a small subunit mitochondrial ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.37544.37544.3	2.4073	0.0677	96.3%	3030.1743	3034.6829	20	4.178	22.2%	1	T.DLSHSFVGLPVSKLLILAGNENLDKELI.V	3

YDL126C

6.9%

835

91996

4.9

CDC48 SGDID:S000002284, Chr IV from 238664-236157, reverse complement, Verified ORF, "ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p and Ufd1p participates in retrotranslocation of ubiquitinated proteins from the ER into the cytosol for degradation by the proteasome"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26746.26746.3	4.0855	0.299	100.0%	3341.9644	3340.5452	6	5.344	25.9%	5	R.EKMDLIDLDEDEIDAEVLDSLGVTMDNFR.F	3
*	22_g_01_itms.20646.20646.3	4.2349	0.4142	100.0%	3087.2043	3083.4077	1	6.661	26.9%	1	K.MDLIDLDEDEIDAEVLDSLGVTMDNFR.F	3
*	22_g_01_itms.11349.11349.3	6.2885	0.3213	100.0%	3209.5444	3204.4783	1	6.681	35.7%	18	K.VEGEDVEMTDEGAKAEQEPEVDPVPYITK.E	3

YFL039C

6.9%

375

41690

5.7

ACT1 SGDID:S000001855, Chr VI from 54695-54686,54377-53260, reverse complement, Verified ORF, "Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.01266.01266.2	2.276	0.305	100.0%	977.03217	976.44885	1	5.783	72.2%	2	K.AGFAGDDAPR.A	2
*	22_g_01_itms.10055.10055.2	4.0478	0.353	100.0%	1792.2322	1790.8925	1	6.046	73.3%	4	K.SYELPDGQVITIGNER.F	2

YBR121C

6.7%

667

75411

6.0

GRS1 SGDID:S000000325, Chr II from 483361-481358, reverse complement, Verified ORF, "Cytoplasmic and mitochondrial glycyl-tRNA synthase that ligates glycine to the cognate anticodon bearing tRNA; transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09591.09591.2	3.9725	0.239	100.0%	1638.3322	1637.7733	1	6.807	67.9%	2	K.IDGYSGPELGELMEK.Y	2
*	22_g_01_itms.15551.15551.3	3.6382	0.1305	97.2%	3275.9043	3272.4758	87	4.228	22.4%	1	R.DITYNGASWEEGTKDLTPFIAQAEAEAETD.-	3
*	22_g_01_itms.12426.12426.2	3.8225	0.4939	100.0%	1721.2122	1720.7917	1	8.383	66.7%	2	K.DLTPFIAQAEAEAETD.-	2

YPL061W

6.6%

500

54414

5.4

ALD6 SGDID:S000005982, Chr XVI from 432585-434087, Verified ORF, "Cytosolic aldehyde dehydrogenase that is activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for the conversion of acetaldehyde to acetate; constitutively expressed"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15660.15660.3	7.4162	0.4115	100.0%	3744.5645	3737.5957	1	7.933	33.6%	4	K.TYPVEDPSTENTVCEVSSATTEDVEYAIECADR.A	3

YAL009W

6.6%

259

30114

10.0

SPO7 SGDID:S000000007, Chr I from 135856-136635, Verified ORF, "Integral nuclear/ER membrane protein of unknown function, required for normal nuclear envelope morphology and sporulation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.40101.40101.3	2.2104	0.1452	90.6%	1769.2743	1766.8534	434	3.815	32.8%	1	V.GNHAQDDSASIVSGPRR.R	3

Reverse_YBL055C

6.5%

418

47390

6.7

YBL055C SGDID:S000000151, Chr II from 116832-115576, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.24427.24427.3	2.873	0.139	90.6%	3222.7744	3216.7566	46	3.818	22.1%	1	A.HTRKIECWPADTELLLRETPIQKVVAL.N	3

YAL025C

6.5%

306

35694

5.3

MAK16 SGDID:S000000023, Chr I from 101146-100226, reverse complement, Verified ORF, "Essential nuclear protein, constituent of 66S pre-ribosomal particles; required for normal concentration of free 60S ribosomal subunits; required for maintenance of M1 satellite double-stranded RNA of the L-A virus"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09881.09881.2	3.4813	0.2754	100.0%	2402.5522	2402.0635	6	5.447	39.5%	1	K.VEIEYEEEHEVQNAEQEVAQ.-	2

YDR463W

6.4%

519

58088

7.5

STP1 SGDID:S000002871, Chr IV from 1386806-1388365, Verified ORF, "Transcription factor, activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31774.31774.3	3.4073	0.2093	94.3%	3781.1343	3786.0198	25	4.064	19.5%	1	E.NHIESGDCKALPQGYTKKNEKRSGKLRKIKTSN.G	3

U	YBR181C	1	1	6.4%	236	26996	10.4	RPS6B SGDID:S000000385, Chr II from 592769-592764,592411-591707, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Ap and has similarity to rat S6 ribosomal protein"
U	YPL090C	1	1	6.4%	236	26996	10.4	RPS6A SGDID:S000006011, Chr XVI from 378392-378387,377992-377288, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to rat S6 ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	22_g_01_itms.06038.06038.2	4.1298	0.401	100.0%	1594.4922	1592.7444	1	7.271	71.4%	1	R.IGQEVDGEAVGDEFK.G	2

YJL060W

6.3%

444

50082

6.6

BNA3 SGDID:S000003596, Chr X from 323302-324636, Verified ORF, "Arylformamidase, involved in biosynthesis of nicotinic acid from tryptophan via kynurenine pathway; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15654.15654.3	3.9785	0.1688	97.4%	3348.7144	3351.7893	38	4.236	24.1%	1	G.KDFRISHWLINELGVVAIPPTEFYIKEH.E	3

YPL124W

6.3%

253

29280

9.5

SPC29 SGDID:S000006045, Chr XVI from 316754-317515, Verified ORF, "Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08075.08075.2	3.8944	0.283	100.0%	1922.6122	1922.8749	120	6.02	43.3%	6	R.SSQIHIENEST*EDILK.I	2
*	22_g_01_itms.07410.07410.2	3.2723	0.1954	93.2%	1924.4122	1922.8749	4	5.149	50.0%	1	R.SSQIHIENES*TEDILK.I	2
*	22_g_01_itms.07781.07781.3	4.0728	0.2179	100.0%	1924.5543	1922.8749	1	5.407	43.3%	2	R.SSQIHIENES*TEDILK.I	3

YER036C

6.2%

610

68377

6.5

YER036C SGDID:S000000838, Chr V from 225198-223366, reverse complement, Uncharacterized ORF, "ATPase of the ATP-binding cassette (ABC) family involved in ribosome biogenesis, has similarity to Gcn20p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31467.31467.2	2.437	0.0824	92.0%	2271.8323	2276.161	1	4.363	42.1%	1	N.YGRRYGLLGENGCGKSTFLK.A	2
*	22_g_01_itms.12705.12705.2	2.6165	0.1159	91.4%	2105.892	2103.0498	43	4.329	35.3%	1	K.TILEDGPESELLEPLYER.M	2

Reverse_YGR152C

6.2%

272

30391

9.2

RSR1 SGDID:S000003384, Chr VII from 795497-794679, reverse complement, Verified ORF, "GTP-binding protein of the ras superfamily required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.01790.01790.3	2.4278	0.1112	90.8%	1679.9944	1681.8622	55	3.835	35.9%	1	A.SIGTRNSSGSKPVAHSP.K	3

Reverse_YNL040W

6.1%

456

50964

6.5

YNL040W SGDID:S000004985, Chr XIV from 553381-554751, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27618.27618.3	2.8903	0.2103	90.5%	3262.4644	3258.709	362	3.806	20.4%	1	E.EEMFYARKKGSAKLTNMLEESATRALRK.I	3

YDR171W

6.1%

375

42817

5.1

HSP42 SGDID:S000002578, Chr IV from 806616-807743, Verified ORF, "Small cytosolic stress-induced chaperone that forms barrel-shaped oligomers and suppresses the aggregation of non-native proteins; oligomer dissociation is not required for function; involved in cytoskeleton reorganization after heat shock"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11457.11457.2	3.5062	0.3946	100.0%	2670.3523	2670.231	1	6.969	38.6%	2	R.IAIEEIPDEELEFEENPNPTVEN.-	2
*	22_g_01_itms.11448.11448.3	3.2476	0.0754	90.6%	2670.3843	2670.231	82	3.81	27.3%	2	R.IAIEEIPDEELEFEENPNPTVEN.-	3

YKL104C

6.0%

717

80047

6.4

GFA1 SGDID:S000001587, Chr XI from 245017-242864, reverse complement, Verified ORF, "Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11708.11708.2	3.8579	0.2413	100.0%	2376.5122	2372.1663	1	5.321	52.5%	3	K.VDFVDVEFPEENAGQPEIPLK.S	2
*	22_g_01_itms.18834.18834.2	4.3589	0.3503	100.0%	2470.0723	2465.245	1	6.874	45.2%	2	R.AIFEELSDIPVSVELASDFLDR.K	2

YGL253W

6.0%

486

53943

5.3

HXK2 SGDID:S000003222, Chr VII from 23935-25395, Verified ORF, "Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol; predominant hexokinase during growth on glucose; functions in the nucleus to repress expression of HXK1 and GLK1 and to induce expression of its own gene"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15667.15667.3	5.7503	0.4047	100.0%	3458.1543	3457.556	4	6.633	25.9%	2	R.IEEDPFENLEDTDDLFQNEFGINTTVQER.K	3

YMR314W

6.0%

234

25604

7.4

PRE5 SGDID:S000004931, Chr XIII from 901708-902412, Verified ORF, "20S proteasome alpha-type subunit"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08091.08091.2	2.8586	0.2438	99.3%	1527.4521	1526.7379	3	4.97	53.8%	1	K.DTPFTIYDGEAVAK.Y	2

YGR187C

5.8%

394

44952

4.7

HGH1 SGDID:S000003419, Chr VII from 871421-870237, reverse complement, Verified ORF, "Protein of unknown function with similarity to human HMG1 and HMG2; localizes to the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15343.15343.2	3.8552	0.3964	100.0%	2734.7322	2734.2292	1	7.169	38.6%	2	K.DSEIDEEDMFNLPDELQLLPEDK.E	2

Reverse_YOL077C

5.8%

291

33577

9.2

BRX1 SGDID:S000005437, Chr XV from 186722-185847, reverse complement, Verified ORF, "Nucleolar protein, constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10100.10100.3	2.7104	0.1409	92.1%	1963.8544	1964.9791	163	3.912	32.8%	1	K.DDVISFSMVHDIFPKSK.R	3

Reverse_YDL168W

5.7%

386

41042

6.8

SFA1 SGDID:S000002327, Chr IV from 159605-160765, Verified ORF, "Bifunctional enzyme containing both alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase activities, functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12251.12251.2	2.2251	0.2547	96.2%	2352.8523	2348.3125	17	4.656	31.0%	1	E.VKLAGKQYDKILGGMESRGKIG.G	2

YPL131W

5.7%

297

33715

6.8

RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14373.14373.2	4.2256	0.3952	100.0%	2094.372	2092.9868	1	6.898	62.5%	4	R.FPGWDFETEEIDPELLR.S	2

YCR002C

5.6%

322

37025

5.7

CDC10 SGDID:S000000595, Chr III from 118345-117377, reverse complement, Verified ORF, "Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10191.10191.2	2.7442	0.2605	97.0%	2228.3323	2228.0247	1	4.725	47.1%	1	K.IYPYDSEELTDEELELNR.S	2

YJR109C

1118

123915

5.3

CPA2 SGDID:S000003870, Chr X from 632856-629500, reverse complement, Verified ORF, "Large subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulline, an arginine precursor"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.18276.18276.3	3.5313	0.1327	90.6%	3995.0942	3995.9185	1	3.816	20.0%	1	T.SEDRDLFASALKDINIPIAESFACETVDEALEAAER.V	3
*	22_g_01_itms.18275.18275.3	4.9327	0.4302	100.0%	2665.0745	2663.251	1	7.631	41.3%	2	K.DINIPIAESFACETVDEALEAAER.V	3
*	22_g_01_itms.18302.18302.2	6.0092	0.4217	100.0%	2668.3123	2663.251	1	8.357	58.7%	3	K.DINIPIAESFACETVDEALEAAER.V	2
*	22_g_01_itms.14820.14820.2	4.8764	0.4239	100.0%	2824.7122	2824.3416	1	7.252	43.8%	2	K.FSSILDSIDVDQPEWSELTSVEEAK.L	2
*	22_g_01_itms.15134.15134.2	2.9909	0.1903	95.5%	2464.7922	2462.1462	58	4.478	31.0%	1	S.SILDSIDVDQPEWSELTSVEEA.K	2

YOL023W

676

75657

8.7

IFM1 SGDID:S000005383, Chr XV from 278056-280086, Verified ORF, "Mitochondrial translation initiation factor 2"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.28474.28474.3	2.8974	0.1541	90.2%	3748.3145	3753.7249	5	3.798	20.1%	1	C.DVSGSAEAVSESISSLGNDEVRCNVISSSVGIPTESD.L	3

Reverse_YIL037C

656

75021

8.0

PRM2 SGDID:S000001299, Chr IX from 284998-283028, reverse complement, Verified ORF, "Pheromone-regulated protein, predicted to have 4 transmembrane segments and a coiled coil domain; regulated by Ste12p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23095.23095.3	2.9387	0.2037	96.4%	3718.5544	3715.8635	1	4.204	21.4%	1	T.TTATTTATATATSISAFTSVTDNRKVQAHSMKAMTI.D	3

YBR015C

597

67774

6.3

MNN2 SGDID:S000000219, Chr II from 269503-267710, reverse complement, Verified ORF, "Alpha-1,2-mannosyltransferase, responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23665.23665.3	3.4222	0.2459	98.6%	3707.1843	3706.6895	16	5.061	20.3%	1	Y.NVNGPTWYYPIFSQKAAGEGDKET*FIAAANFYG.L	3

YER021W

523

60393

5.6

RPN3 SGDID:S000000823, Chr V from 196947-198518, Verified ORF, "Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23083.23083.3	3.9476	0.0982	92.0%	3467.9343	3466.5925	19	3.896	23.2%	1	K.INHEDGFIETTELLNIYDSEDPQQVFDER.I	3

Reverse_YIL135C

436

47961

9.2

VHS2 SGDID:S000001397, Chr IX from 96375-95065, reverse complement, Verified ORF, "Cytoplasmic protein of unknown function; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; similar to Mlf3p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.20330.20330.2	2.1634	0.1888	98.7%	2601.9722	2605.2468	61	4.915	28.3%	1	S.SNNHNFLSTRSSQRSLSNAANNSV.T	2

YOR373W

851

94104

7.0

NUD1 SGDID:S000005900, Chr XV from 1036830-1039385, Verified ORF, "Component of the spindle pole body outer plaque, required for exit from mitosis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.13056.13056.3	4.2872	0.1045	98.6%	2943.9844	2941.182	1	5.039	35.6%	1	K.VSSSFSDDSDSGPAAEAHDVFDGILQK.Q	3
*	22_g_01_itms.08298.08298.2	3.7856	0.4319	100.0%	2302.1921	2301.9417	14	6.557	38.9%	1	R.VEDITSISEVNTSFNETEK.Q	2

YHL027W

625

68232

7.2

RIM101 SGDID:S000001019, Chr VIII from 51109-52986, Verified ORF, "Transcriptional repressor involved in the response to pH; required for alkaline pH-stimulated differentiation pathways such as haploid invasive growth and sporulation; activated by proteolytic processing; has similarity to the A. nidulans transcription factor PacC"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21016.21016.3	3.3646	0.0744	91.7%	3559.6143	3562.7737	366	3.861	18.2%	1	N.KENGTAAPQHSRESIVENGTDVSNVTKKDGLPSP.N	3

Reverse_YDL066W

428

48190

8.8

IDP1 SGDID:S000002224, Chr IV from 334835-336121, Verified ORF, "Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate to alpha-ketoglutarate; not required for mitochondrial respiration and may function to divert alpha-ketoglutarate to biosynthetic processes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.00651.00651.3	2.2412	0.0158	92.8%	2446.4944	2445.176	120	3.928	25.0%	1	G.FGQAVIDSQVDGDYNKLAMIFGG.K	3

Reverse_YDR528W

423

47578

6.7

HLR1 SGDID:S000002936, Chr IV from 1494576-1495847, Verified ORF, "Protein involved in regulation of cell wall composition and integrity and response to osmotic stress; overproduction suppresses a lysis sensitive PKC mutation; similar to Lre1p, which functions antagonistically to protein kinase A"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.29605.29605.3	3.2972	0.0916	97.5%	2601.9543	2600.3643	61	4.275	25.0%	1	K.KISSSQPSLRVRENISTQLNDID.Q	3

YLR449W

392

43903

4.7

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27308.27308.2	2.3906	0.2139	92.0%	2613.5923	2609.485	2	4.364	35.0%	1	E.LVKKDEKKKNNKKDSKRKHEE.D	2

YGR023W

551

57528

4.7

MTL1 SGDID:S000003255, Chr VII from 529268-530923, Verified ORF, "Protein with both structural and functional similarity to Mid2p, which is a plasma membrane sensor required for cell integrity signaling during pheromone-induced morphogenesis; suppresses rgd1 null mutations"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25154.25154.3	3.0809	0.1436	92.8%	2829.5942	2830.227	3	3.951	25.0%	1	L.SSTLSSELSSSSMQVSSSSTSSSSSEVTS.S	3

YKL189W

399

45853

8.4

HYM1 SGDID:S000001672, Chr XI from 84709-85908, Verified ORF, "Component of the RAM signaling network that is involved in regulation of Ace2p activity and cellular morphogenesis, interacts with Kic1p and Sog2p, localizes to sites of polarized growth during budding and during the mating response"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.00716.00716.3	2.8107	0.1174	98.6%	2328.1743	2326.317	386	4.485	25.0%	1	Y.LVSQPKTISLMLRTAEVALQQ.K	3

YDR432W

414

45407

5.5

NPL3 SGDID:S000002840, Chr IV from 1328773-1330017, Verified ORF, "RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm; phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.17136.17136.2	4.6026	0.3217	100.0%	2438.4321	2437.1775	1	5.88	45.2%	2	R.DFDGTGALEFPSEEILVEALER.L	2
*	22_g_01_itms.17156.17156.3	2.9535	0.2002	97.9%	2438.6042	2437.1775	114	4.286	26.2%	1	R.DFDGTGALEFPSEEILVEALER.L	3

YPL113C

396

45014

7.2

YPL113C SGDID:S000006034, Chr XVI from 337142-335952, reverse complement, Uncharacterized ORF, "Putative dehydrogenase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.29439.29439.2	2.6155	0.2362	95.8%	2228.9521	2228.2192	11	4.561	35.0%	1	V.LILGFGSIGQNIGSNLHKVFN.M	2

Reverse_YOL047C

356

40878

8.6

YOL047C SGDID:S000005407, Chr XV from 242745-242503,242439-241612, reverse complement, Uncharacterized ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11201.11201.3	3.2924	0.0586	95.8%	2149.4043	2146.235	29	4.158	36.1%	1	I.CVLLSWALISTFAVILLLN.L	3

Reverse_YKL005C

594

67901

5.4

BYE1 SGDID:S000001488, Chr XI from 434520-432736, reverse complement, Verified ORF, "Negative regulator of transcription elongation, contains a TFIIS-like domain and a PHD finger, multicopy suppressor of temperature-sensitive ess1 mutations, probably binds RNA polymerase II large subunit"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10541.10541.3	3.0893	0.0066	95.0%	3613.8843	3610.8884	83	4.114	19.2%	1	E.KFIDRRLKQSAGIYNLYGTFELGLGPYLFAC.N	3

YDR190C

463

50453

5.9

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09662.09662.2	5.3441	0.3273	100.0%	2598.2722	2596.1943	1	6.536	56.5%	2	K.EVYEGEVTELTPEDAENPLGGYGK.T	2

Reverse_YBR057C

366

41433

5.9

MUM2 SGDID:S000000261, Chr II from 353291-352191, reverse complement, Verified ORF, "Cytoplasmic protein essential for meiotic DNA replication and sporulation; interacts with Orc2p, which is a component of the origin recognition complex"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.19219.19219.3	4.3784	0.1191	90.9%	2212.1343	2212.9385	1	3.837	41.7%	1	E.MRDDKNSNMENSNVNNMSL.A	3

YDR158W

365

39544

6.7

HOM2 SGDID:S000002565, Chr IV from 770352-771449, Verified ORF, "Aspartic beta semi-aldehyde dehydrogenase, catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11186.11186.2	2.9475	0.3025	97.8%	2075.7522	2072.9487	6	4.812	36.1%	1	K.ECDIVFSGLDADYAGAIEK.E	2

Reverse_YOL011W

5.1%

686

75077

5.0

PLB3 SGDID:S000005371, Chr XV from 305349-307409, Verified ORF, "Phospholipase B (lysophospholipase) involved in phospholipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25056.25056.3	2.9681	0.1054	91.6%	3865.3145	3871.9492	11	3.87	19.9%	1	N.DVAFIIDVDREKQILPLVPVNEDDEGGDVLFLSDS.D	3

YKL103C

5.1%

514

57093

5.8

LAP4 SGDID:S000001586, Chr XI from 247326-245782, reverse complement, Verified ORF, "Vacuolar aminopeptidase, often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15294.15294.3	3.703	0.1347	93.3%	2948.7244	2947.3696	51	4.003	25.0%	1	K.DVNTEESDLFSTVTLYDNEEIGSLTR.Q	3

Reverse_YBR197C

5.1%

217

24203

9.1

YBR197C SGDID:S000000401, Chr II from 615851-615198, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR197C is not an essential gene"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08965.08965.2	1.9818	0.2001	94.5%	1221.3121	1222.6028	8	4.461	65.0%	1	S.DSSGKRKDKDS.K	2

YBL055C

5.0%

418

47390

6.7

YBL055C SGDID:S000000151, Chr II from 116832-115576, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.13689.13689.2	2.3438	0.2534	97.1%	2429.9521	2434.286	1	5.484	37.5%	1	P.DRKLVVHSFTGS*AIDLQKLLN.L	2

YNL037C

5.0%

360

39324

9.0

IDH1 SGDID:S000004982, Chr XIV from 559003-557921, reverse complement, Verified ORF, "Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07922.07922.2	3.6197	0.2213	99.3%	1901.6322	1898.8983	12	5.021	44.1%	2	R.DIGGSSSTTDFTNEIINK.L	2

YMR300C

4.9%

510

56719

6.3

ADE4 SGDID:S000004915, Chr XIII from 867090-865558, reverse complement, Verified ORF, "Phosphoribosylpyrophosphate amidotransferase (PRPPAT; amidophosphoribosyltransferase), catalyzes first step of the 'de novo' purine nucleotide biosynthetic pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14315.14315.2	3.8171	0.4223	100.0%	2838.8123	2838.2998	1	6.994	39.6%	2	K.FEDGVFTGNYVTGVEDGYIQELEEK.R	2
*	22_g_01_itms.14294.14294.3	5.7269	0.2582	100.0%	2840.3342	2838.2998	1	6.849	35.4%	2	K.FEDGVFTGNYVTGVEDGYIQELEEK.R	3

YML127W

4.8%

581

65218

7.8

RSC9 SGDID:S000004596, Chr XIII from 17065-18810, Verified ORF, "One of 15 subunits of the 'Remodel the Structure of Chromatin' (RSC) complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.28794.28794.3	3.2219	0.1594	93.4%	3208.3743	3204.7117	2	3.979	25.0%	1	N.LDHKTLSLIVSFLLLECDSELIIASLDF.L	3

Reverse_YML123C

4.8%

587

64382

6.4

PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25770.25770.3	3.2028	0.1797	95.4%	3168.0544	3164.7375	398	4.141	22.2%	1	I.VYLALLGHDGLKHYAFGIVCFLATLIIF.G	3

YGL206C

4.7%

1653

187233

5.2

CHC1 SGDID:S000003174, Chr VII from 107508-102547, reverse complement, Verified ORF, "Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; two heavy chains form the clathrin triskelion structural component; the light chain (CLC1) is thought to regulate function"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11803.11803.2	2.9457	0.1978	100.0%	1872.7522	1869.938	2	5.533	50.0%	1	K.DANLEDQLPLVIVCDR.F	2
*	22_g_01_itms.25213.25213.3	3.2205	0.1978	93.3%	4377.8345	4374.21	2	3.991	17.3%	1	K.TAQVVGALLDMDCDEAFIQSLLQSVLGQVPINELTTEVEK.R	3
*	22_g_01_itms.24033.24033.2	3.5569	0.2051	93.3%	2538.5923	2536.2249	1	4.417	42.9%	2	R.YESNGYFEELISLFEAGLGLER.A	2

YCR088W

4.6%

592

65576

4.7

ABP1 SGDID:S000000684, Chr III from 265064-266842, Verified ORF, "Actin-binding protein of the cortical actin cytoskeleton, important for activation of the Arp2/3 complex that plays a key role actin in cytoskeleton organization"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10464.10464.3	3.6288	0.2194	98.1%	3037.5842	3035.3606	335	4.304	23.1%	1	K.QEEAPEQAPEEEIEEEAEEAAPQLPSR.S	3

YMR019W

949

109825

7.3

STB4 SGDID:S000004621, Chr XIII from 312155-315004, Verified ORF, "Protein that binds Sin3p in a two-hybrid assay; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27466.27466.3	2.6868	0.089	92.0%	4321.0444	4329.1484	69	3.887	16.7%	1	L.ATRSHNTTNFDGSIAISPESAVANLGTDTGLPSDVLDTVSKIG.N	3

YJL083W

604

68768

9.6

TAX4 SGDID:S000003619, Chr X from 278757-280571, Verified ORF, "Protein involved in regulation of phosphatidylinositol 4,5-bisphosphate concentrations; Irs4p and Tax4p bind and activate the phosphatase Inp51p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11085.11085.3	3.2529	0.213	92.2%	2847.3843	2845.387	103	3.91	25.0%	1	I.HYDVRNKASNSPSSIAAAETAAYLAHT.N	3

Reverse_YGR023W

551

57528

4.7

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39982.39982.3	2.5565	0.1193	94.4%	2646.0544	2644.228	3	4.078	25.0%	1	S.LGSHHSNKGSSASATPSYTITTYYN.S	3

Reverse_YBR042C

397

45515

9.3

YBR042C SGDID:S000000246, Chr II from 321609-320416, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27813.27813.2	2.27	0.2887	99.0%	1715.5922	1716.8881	1	4.937	44.1%	1	S.GAGRANSDLGALSNSLTI.K	2

YFL018C

4.4%

499

54010

8.0

LPD1 SGDID:S000001876, Chr VI from 103121-101622, reverse complement, Verified ORF, "Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11569.11569.2	3.7526	0.3138	100.0%	2361.9521	2358.208	9	5.438	35.7%	1	K.NIIVATGSEVTPFPGIEIDEEK.I	2

YLL057C

4.4%

412

46983

6.7

JLP1 SGDID:S000003980, Chr XII from 26994-25756, reverse complement, Uncharacterized ORF, "Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use as a sulfur source, contains sequence that closely resembles a J domain (typified by the E. coli DnaJ protein)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.01250.01250.3	2.54	0.0417	95.1%	1831.3143	1829.8234	12	4.125	33.8%	1	T.FFSVVEGPDGGGDTLFAD.T	3

YER147C

624

72141

7.8

SCC4 SGDID:S000000949, Chr V from 464837-462963, reverse complement, Verified ORF, "Subunit of cohesin loading factor (Scc2p-Scc4p), a complex required for the loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during double-strand break repair via phosphorylated histone H2AX"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.20434.20434.3	3.9736	0.1706	99.2%	2817.6843	2814.3909	329	4.704	25.0%	1	M.KVQFEGGGAVEEYTRLAQSGGTSSEVK.M	3

YDR143C

610

65618

5.2

SAN1 SGDID:S000002550, Chr IV from 743869-742037, reverse complement, Verified ORF, "Ubiquitin-protein ligase, involved in the proteasome-dependent degradation of aberrant nuclear proteins; san1 mutations suppress sir4, spt16, and cdc68 mutations, suggesting a role in chromatin silencing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.19933.19933.3	3.2149	0.2821	98.5%	2909.8442	2909.262	54	5.158	25.0%	1	S.STTQNPPSNSGGSNNNQSPRWVPIPL.T	3

YER165W

577

64344

6.0

PAB1 SGDID:S000000967, Chr V from 510368-512101, Verified ORF, "Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15095.15095.3	3.807	0.2675	100.0%	2787.5645	2786.2896	1	5.349	32.3%	2	K.NLDDSVDDEKLEEEFAPYGTITSAK.V	3

YLR286C

562

59015

4.5

CTS1 SGDID:S000004276, Chr XII from 710138-708450, reverse complement, Verified ORF, "Endochitinase, required for cell separation after mitosis; transcriptional activation during late G and early M cell cycle phases is mediated by transcription factor Ace2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.34756.34756.2	2.5778	0.1236	93.0%	2487.372	2486.1257	2	5.156	30.4%	1	K.NIKLFLGLPGSASAAGSGYISDTS.L	2

YDL044C

440

51192

6.7

MTF2 SGDID:S000002202, Chr IV from 375286-373964, reverse complement, Verified ORF, "Mitochondrial matrix protein that interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10761.10761.2	2.7189	0.1699	90.7%	2222.4321	2225.2043	286	4.32	30.6%	1	A.MTLPYIIVKSLRLGDFDFP.A	2

Reverse_YOR250C

445

50226

5.9

CLP1 SGDID:S000005776, Chr XV from 802307-800970, reverse complement, Verified ORF, "Subunit of cleavage factor I (CFI), involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3'-end maturation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07224.07224.3	3.4225	0.0371	90.4%	2129.3643	2125.2021	215	3.806	29.2%	1	L.KGEAKLDIQWDSGKPIVLK.H	3

YNL021W

706

80070

5.5

HDA1 SGDID:S000004966, Chr XIV from 593228-595348, Verified ORF, "Putative catalytic subunit of a class II histone deacetylase complex that also contains Hda2p and Hda3p; Hda1p interacts with the Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14059.14059.3	3.7833	0.1926	90.6%	3314.6643	3310.8625	1	3.816	25.9%	1	R.DTRAVTKTVINFLGDKQLKPLVPLVDETLS.E	3

YNL016W

453

50763

5.1

PUB1 SGDID:S000004961, Chr XIV from 602908-604269, Verified ORF, "Poly(A)+ RNA-binding protein, abundant mRNP-component protein hypothesized to bind a pool of non-translatable mRNAs; not reported to associate with polyribosomes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12950.12950.3	3.0373	0.2502	98.7%	2256.0842	2259.1023	17	5.03	31.9%	1	G.RET*SDRVLYVGNLDKAITE.D	3

Reverse_YER154W

402

44816

10.1

OXA1 SGDID:S000000956, Chr V from 475015-476223, Verified ORF, "Translocase of the mitochondrial inner membrane, mediates the insertion of both mitochondrial- and nuclear-encoded proteins from the matrix into the inner membrane, interacts with mitochondrial ribosomes; null is respiratory deficient"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38710.38710.3	2.506	0.1493	97.3%	1867.2244	1865.9722	275	4.27	32.8%	2	N.LADLEPKIHSNRAVTDS.S	3

YML119W

357

40060

9.6

YML119W SGDID:S000004588, Chr XIII from 30611-31684, Uncharacterized ORF, "Protein of unknown function, potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.01569.01569.3	2.9122	0.1797	98.6%	1834.1044	1835.9033	50	5.056	39.3%	1	P.IQLSTNSKTRISKSL.D	3

YJL213W

331

35905

7.0

YJL213W SGDID:S000003749, Chr X from 32163-33158, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21219.21219.3	2.3793	0.1308	96.5%	1379.8744	1377.7313	11	4.186	40.4%	1	R.RGADFIKIMGGGGV.A	3

Reverse_YGL205W

748

84042

8.5

POX1 SGDID:S000003173, Chr VII from 108162-110408, Verified ORF, "Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23429.23429.3	3.8078	0.1077	92.1%	3667.1343	3670.056	407	3.902	19.2%	1	I.CDKRVIPLLALLQPQVVKSIQDPTFIKFQQF.E	3

YMR001C

705

81031

9.0

CDC5 SGDID:S000004603, Chr XIII from 271136-269019, reverse complement, Verified ORF, "Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p; found at bud neck, nucleus and SPBs; has multiple functions in mitosis and cytokinesis through phosphorylation of substrates; may be a Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.24906.24906.3	3.9325	0.1729	92.6%	3257.1243	3261.782	3	3.922	25.0%	1	L.NTRSKLVHTPIKGNTADLVGKENHFKQTK.R	3

YBR286W

537

60138

5.3

APE3 SGDID:S000000490, Chr II from 774696-776309, Verified ORF, "Vacuolar aminopeptidase Y, processed to mature form by Prb1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.19284.19284.2	2.4274	0.2722	99.3%	2408.9922	2412.1836	1	5.0	35.7%	1	P.QLNDDDSSAVAANIPKPHIPYF.M	2

YBR273C

436

50031

6.3

UBX7 SGDID:S000000477, Chr II from 749366-748056, reverse complement, Uncharacterized ORF, "UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.46042.46042.3	2.1798	0.1271	93.5%	1840.0443	1842.9058	43	4.018	30.9%	1	P.NRHEVRSSTPLSGAASSS.C	3

YOR187W

437

47972

6.7

TUF1 SGDID:S000005713, Chr XV from 684030-685343, Verified ORF, "Mitochondrial translation elongation factor Tu; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14730.14730.2	4.2964	0.4215	100.0%	2168.872	2164.9817	1	7.382	55.9%	3	K.VDTIDDPEMLELVEMEMR.E	2

YBL050W

292

32803

5.1

SEC17 SGDID:S000000146, Chr II from 125128-125157,125274-126122, Verified ORF, "Peripheral membrane protein required for vesicular transport between ER and Golgi and for the 'priming' step in homotypic vacuole fusion, part of the cis-SNARE complex; has similarity to alpha-SNAP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21598.21598.3	2.0479	0.1696	96.5%	1202.2144	1201.6177	320	4.184	36.4%	1	T.DAVAAARTLQEG.Q	3

YDR060W

1025

116676

5.0

MAK21 SGDID:S000002467, Chr IV from 570645-573722, Verified ORF, "Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14084.14084.2	5.3846	0.3625	100.0%	2498.392	2494.996	1	6.519	57.5%	3	K.ASNFDS*DDEMDENEIWSALVK.S	2
*	22_g_01_itms.13935.13935.2	4.0852	0.3457	100.0%	2300.892	2299.9285	1	6.96	50.0%	1	K.SLPVFASADDYAQYLDQDS*D.-	2

YGL137W

889

99445

4.7

SEC27 SGDID:S000003105, Chr VII from 249874-249891,250092-252743, Verified ORF, "Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport; contains WD40 domains that mediate cargo selective interactions; 45% sequence identity to mammalian beta'-COP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21694.21694.3	5.6906	0.3746	100.0%	3857.9644	3850.7307	1	7.086	25.0%	3	K.DAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGK.W	3

YJR045C

654

70628

5.6

SSC1 SGDID:S000003806, Chr X from 521516-519552, reverse complement, Verified ORF, "Mitochondrial matrix ATPase that is a subunit of the presequence translocase-associated protein import motor (PAM); involved in protein translocation into the matrix and protein folding; member of the heat shock protein 70 (HSP70) family"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12709.12709.3	5.3871	0.3354	100.0%	2713.2844	2710.2366	1	6.657	34.0%	3	K.DSSITVAGSSGLSENEIEQMVNDAEK.F	3
*	22_g_01_itms.12804.12804.2	4.9431	0.3926	100.0%	2714.912	2710.2366	1	7.459	40.0%	4	K.DSSITVAGSSGLSENEIEQMVNDAEK.F	2

YHR065C

501

55969

9.2

RRP3 SGDID:S000001107, Chr VIII from 229039-227534, reverse complement, Verified ORF, "Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10572.10572.3	3.0911	0.0694	98.7%	2343.8943	2342.259	6	4.413	28.9%	1	L.MRKPHIIIATPGRLMDHLEN.T	3

Reverse_YMR030W

376

43460

8.2

RSF1 SGDID:S000004632, Chr XIII from 330792-331922, Verified ORF, "Protein required for respiratory growth; localized to both the nucleus and mitochondrion; mutant displays decreased transcription of specific nuclear and mitochondrial genes whose products are involved in respiratory growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.02522.02522.3	2.7284	0.253	99.4%	1523.8744	1526.72	50	4.827	37.5%	1	L.SSGTEPHNGNVDGKK.K	3

YIL075C

945

104232

6.2

RPN2 SGDID:S000001337, Chr IX from 220697-217860, reverse complement, Verified ORF, "Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25731.25731.3	4.4666	0.2632	100.0%	4291.7344	4289.989	1	5.803	23.6%	3	K.TYALESINNVVDQLWSEISNELPDIEALYDDDTFSDR.E	3

YMR016C

785

85643

8.5

SOK2 SGDID:S000004618, Chr XIII from 305592-303235, reverse complement, Verified ORF, "Nuclear protein that plays a regulatory role in the cyclic AMP (cAMP)-dependent protein kinase (PKA) signal transduction pathway; negatively regulates pseudohyphal differentiation; homologous to several transcription factors"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22252.22252.3	3.4382	0.1487	95.1%	3362.1243	3363.5405	22	4.13	20.8%	1	A.YYYYPANGDGTTNGATPSVTSNQVQNPNLEK.T	3

Reverse_YFL047W

714

82209

5.8

RGD2 SGDID:S000001847, Chr VI from 40421-42565, Verified ORF, "GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26904.26904.3	3.3818	0.219	93.3%	3259.9443	3263.5862	68	3.966	20.4%	1	I.KNGLTSCFDLTAKKIANLRDSECKEMFS.L	3

YHR020W

688

77386

6.4

YHR020W SGDID:S000001062, Chr VIII from 143989-146055, Uncharacterized ORF, "Protein required for cell viability"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25572.25572.2	4.9397	0.493	100.0%	3053.672	3051.5818	1	9.096	42.3%	2	K.DAEEEVLQILDFYAGVYEELLAVPVVK.G	2
*	22_g_01_itms.25644.25644.3	5.7014	0.3734	100.0%	3056.9343	3051.5818	1	6.822	30.8%	4	K.DAEEEVLQILDFYAGVYEELLAVPVVK.G	3

YDL097C

434

49774

6.3

RPN6 SGDID:S000002255, Chr IV from 286695-285391, reverse complement, Verified ORF, "Essential, non-ATPase regulatory subunit of the 26S proteasome lid required for the assembly and activity of the 26S proteasome; the human homolog (S9 protein) partially rescues Rpn6p depletion"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10196.10196.2	3.4548	0.2045	100.0%	2072.7722	2068.9539	2	5.422	50.0%	2	K.FEQVPDSLDDQIFVCEK.S	2

Reverse_YHR027C

993

109492

4.6

RPN1 SGDID:S000001069, Chr VIII from 164704-161723, reverse complement, Verified ORF, "Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein?protein interactions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.00816.00816.2	2.9281	0.1538	98.1%	1224.6721	1222.4785	1	4.817	75.0%	2	E.GEADVEMEDVE.I	2
*	22_g_01_itms.26884.26884.3	3.288	0.0611	91.8%	3096.7444	3099.5679	91	3.876	24.0%	1	N.LEKALYLFHESLKGNGIIDQVGEYEFS.T	3

Reverse_YOR113W

914

101170

7.4

AZF1 SGDID:S000005639, Chr XV from 534075-536819, Verified ORF, "Zinc-finger transcription factor, involved in induction of CLN3 transcription in response to glucose; genetic and physical interactions indicate a possible role in mitochondrial transcription or genome maintenance"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27585.27585.3	3.2435	0.0686	90.7%	3826.2244	3824.0208	41	3.82	18.4%	2	P.HNEPSSITSKKTGVGKGRGKIGRNSNKYISAFYEL.L	3

Reverse_YNL068C

862

94374

9.3

FKH2 SGDID:S000005012, Chr XIV from 498290-495702, reverse complement, Verified ORF, "Transcription factor of the forkhead family that regulates the cell cycle and pseudohyphal growth; also involved in chromatin silencing at HML and HMR; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23723.23723.3	3.4936	0.264	93.0%	3623.2444	3621.7566	200	4.789	18.8%	1	F.AKTPSRLLTDYPQSLRLSNAALSSTTTGTQPVS.N	3

YBR276C

807

91685

7.1

PPS1 SGDID:S000000480, Chr II from 760039-757616, reverse complement, Verified ORF, "Protein phosphatase with specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31440.31440.3	3.4642	0.2004	98.7%	3634.6743	3641.7688	356	4.395	18.3%	1	N.LCSSPSEIVCFNNVDKNMVLCEKLELNKLTS.A	3

Reverse_YEL065W

628

70562

8.1

SIT1 SGDID:S000000791, Chr V from 27657-29543, Verified ORF, "Ferrioxamine B transporter, member of the ARN family of transporters that specifically recognize siderophore-iron chelates; transcription is induced during iron deprivation and diauxic shift; potentially phosphorylated by Cdc28p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27918.27918.2	2.4124	0.24	98.4%	2603.612	2602.4246	234	4.907	26.1%	1	T.FPSGYAQAALTPDSIRKSIEKPLI.N	2

YIL099W

549

61463

5.1

SGA1 SGDID:S000001361, Chr IX from 178001-179650, Verified ORF, "Intracellular sporulation-specific glucoamylase involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22259.22259.2	2.4816	0.1292	91.8%	2280.5522	2281.2056	36	4.349	32.5%	1	Y.NKLLGMLSVGFGFAWALENIT.I	2

YBR078W

468

48237

5.1

ECM33 SGDID:S000000282, Chr II from 393118-393175,393506-394854, Verified ORF, "GPI-anchored protein of unknown function, has a possible role in apical bud growth; GPI-anchoring on the plasma membrane crucial to function; similar to Sps2p and Pst1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.02655.02655.3	2.8483	0.2742	98.8%	1948.1344	1947.0472	173	4.519	32.4%	1	K.KITGDLNMQELIILTSAS.F	3

YJL200C

3.7%

789

86583

7.0

YJL200C SGDID:S000003736, Chr X from 58813-56444, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26846.26846.3	3.5513	0.2359	99.4%	3026.2444	3028.305	234	4.784	22.3%	1	V.EYFGEGVSTLSCTGMATICNMGAEIGATT.S	3

YFR053C

3.7%

485

53738

5.5

HXK1 SGDID:S000001949, Chr VI from 255036-253579, reverse complement, Verified ORF, "Hexokinase isoenzyme 1, a cytosolic protein that catalyzes phosphorylation of glucose during glucose metabolism; expression is highest during growth on non-glucose carbon sources; glucose-induced repression involves the hexokinase Hxk2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12510.12510.2	3.514	0.3758	100.0%	2183.3523	2182.9668	1	6.614	52.9%	2	R.IEDDPFENLEDTDDIFQK.D	2

Reverse_YKR034W

3.7%

269

30166

8.6

DAL80 SGDID:S000001742, Chr XI from 506540-507349, Verified ORF, "Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Deh1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.32346.32346.2	1.0629	0.0651	90.9%	1063.7122	1064.4868	59	4.323	50.0%	1	F.LGCANCLVTG.H	2

Reverse_YML109W

942

105496

5.4

ZDS2 SGDID:S000004577, Chr XIII from 51640-54468, Verified ORF, "Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencing; paralog of Zds1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21860.21860.3	3.8405	0.253	96.6%	3870.6243	3866.6282	83	4.919	18.9%	1	A.TPSTNDEREAGIDEELGATTDRSISSHVEVDYNV.D	3

YNL287W

935

104831

5.1

SEC21 SGDID:S000005231, Chr XIV from 91994-94801, Verified ORF, "Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat; involved in ER to Golgi transport of selective cargo"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.16435.16435.3	4.511	0.2866	100.0%	3902.5745	3895.6987	1	5.771	26.5%	1	K.EINPDTNEPFDGDEGFQDEYEIDSIFLNAGDYVK.S	3

YLR451W

886

100153

6.1

LEU3 SGDID:S000004443, Chr XII from 1036089-1038749, Verified ORF, "Zinc-finger transcription factor that regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; positively regulated by alpha-isopropylmalate, an intermediate in leucine biosynthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14160.14160.3	4.1841	0.1398	93.9%	3814.8542	3813.9988	2	4.031	21.8%	1	S.QEEKQPLLHVLNQQLSQLEISLEENNLDDIRK.F	3

Reverse_YPL032C

825

92144

8.7

SVL3 SGDID:S000005953, Chr XVI from 491362-488885, reverse complement, Verified ORF, "Protein of unknown function, mutant phenotype suggests a potential role in vacuolar function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38940.38940.3	3.0003	0.145	93.8%	3032.5745	3031.2913	1	4.823	26.7%	1	G.NDTSPSAMNAMQSSS*SLTPTSPASVSTTPP.P	3

YMR297W

532

59802

4.7

PRC1 SGDID:S000004912, Chr XIII from 861921-863519, Verified ORF, "Vacuolar carboxypeptidase Y (proteinase C), involved in protein degradation in the vacuole and required for full protein degradation during sporulation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21848.21848.2	3.7959	0.3657	100.0%	2428.5122	2427.1548	1	6.715	50.0%	1	K.DVYNFLELFFDQFPEYVNK.G	2

YER060W

528

58050

5.5

FCY21 SGDID:S000000862, Chr V from 274565-276151, Verified ORF, "Putative purine-cytosine permease, very similar to Fcy2p but cannot substitute for its function"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12522.12522.2	1.8554	0.1923	95.6%	2048.7922	2047.9078	2	4.535	38.9%	1	S.FGSTVYGFAAGWTTYAADY.T	2

YOL059W

440

49422

7.1

GPD2 SGDID:S000005420, Chr XV from 217125-218447, Verified ORF, "NAD-dependent glycerol 3-phosphate dehydrogenase, homolog of Gpd1p, expression is controlled by an oxygen-independent signaling pathway required to regulate metabolism under anoxic conditions; located in cytosol and mitochondria"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15722.15722.2	4.5234	0.3477	100.0%	1937.1921	1935.8091	1	6.905	70.0%	2	R.MEDLPEMIEELDIDDE.-	2

YCL044C

417

47156

9.3

MGR1 SGDID:S000000549, Chr III from 48364-47111, reverse complement, Verified ORF, "Subunit, with Yme1p, of the mitochondrial inner membrane i-AAA protease complex, which is responsible for degradation of unfolded or misfolded mitochondrial gene products; required for growth of cells lacking the mitochondrial genome"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31789.31789.3	2.229	0.1564	93.4%	1526.1843	1524.6641	268	3.968	37.5%	1	-.MAVFTPPSGNSNSTD.H	3

YER028C

394

43119

9.9

MIG3 SGDID:S000000830, Chr V from 211875-210691, reverse complement, Verified ORF, "Probable transcriptional repressor involved in response to toxic agents such as hydroxyurea that inhibit ribonucleotide reductase; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10045.10045.3	2.7427	0.1545	91.9%	1831.3143	1827.8383	90	3.884	36.5%	1	N.DQRPFRCEICSRGF.H	3

YNL243W

968

108996

5.5

SLA2 SGDID:S000005187, Chr XIV from 188052-190958, Verified ORF, "Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization; adaptor protein that links actin to clathrin and endocytosis; present in the actin cortical patch of the emerging bud tip; dimer in vivo"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27439.27439.3	2.8859	0.0976	94.1%	3839.5144	3836.0051	287	4.056	15.9%	1	S.MATLVTNSKAYAVTTLPQEQSDQILTLVKRCARE.A	3

Reverse_YBR276C

807

91685

7.1

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11455.11455.3	3.4759	0.2147	91.5%	3309.6243	3309.4792	104	4.753	22.2%	1	I.ESPSSCLNLPTNNKFFENDLLPTGILTQ.P	3

YBL099W

545

58618

9.0

ATP1 SGDID:S000000195, Chr II from 37050-38687, Verified ORF, "Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.45655.45655.3	3.1183	0.2078	92.4%	2134.2544	2135.149	218	4.769	31.9%	1	A.PGILPRRSVHEPVQT*GLKA.V	3

Reverse_YCR045C

491

55068

5.4

YCR045C SGDID:S000000641, Chr III from 209605-208130, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12089.12089.2	2.1412	0.1728	93.5%	1844.9722	1842.0383	205	4.426	31.2%	1	S.GLSLNAVCKKGQPRSVK.T	2

YER090W

507

56768

5.9

TRP2 SGDID:S000000892, Chr V from 337945-339468, Verified ORF, "Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11563.11563.2	4.7669	0.3146	100.0%	1844.6322	1841.9384	1	6.49	59.4%	1	K.TGPTEGIETDPLEILEK.E	2

YBR293W

474

51677

9.7

VBA2 SGDID:S000000497, Chr II from 787001-788425, Verified ORF, "Permease of basic amino acids in the vacuolar membrane"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15546.15546.3	2.6634	0.0963	98.6%	1902.0844	1905.0566	5	4.507	40.0%	1	S.YAYLFTLPLFFQIVLG.D	3

YBR233W

413

45782

7.7

PBP2 SGDID:S000000437, Chr II from 683423-684664, Verified ORF, "RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07725.07725.2	2.5204	0.1809	96.0%	1493.2522	1490.8075	2	4.642	57.7%	1	F.MASQAAIMLISNKI.E	2

YAL060W

382

41538

6.7

BDH1 SGDID:S000000056, Chr I from 35156-36304, Verified ORF, "NAD-dependent (2R,3R)-2,3-butanediol dehydrogenase, a zinc-containing medium-chain alcohol dehydrogenase, produces 2,3-butanediol from acetoin during fermentation and allows using 2,3-butanediol as a carbon source during aerobic growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.29497.29497.2	1.7259	0.1976	95.4%	1416.0122	1416.8214	13	4.521	50.0%	1	M.AKKLGVEVFNPSK.H	2

YIR033W

1113

127054

5.2

MGA2 SGDID:S000001472, Chr IX from 416121-419462, Verified ORF, "ER membrane protein involved, with its homolog Spt23p, in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.24558.24558.3	3.1091	0.1556	95.1%	4223.304	4218.923	330	4.127	16.0%	1	D.SVETDSNYSISRKYSQSSFNSSLLDNESLNENLFESQ.S	3

YLR249W

1044

115945

6.0

YEF3 SGDID:S000004239, Chr XII from 636782-639916, Verified ORF, "Translational elongation factor, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes by releasing EF-1 alpha from the ribosomal complex; contains two ABC cassettes; binds and hydrolyses ATP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.18803.18803.3	4.7987	0.3144	100.0%	3847.1643	3845.6548	6	6.224	22.7%	22	K.RAVDNIPVGPNFDDEEDEGEDLCNCEFSLAYGAK.I	3
*	22_g_01_itms.11849.11849.3	5.4703	0.412	100.0%	3691.2544	3689.5535	1	7.367	30.5%	3	R.AVDNIPVGPNFDDEEDEGEDLCNCEFSLAYGAK.I	3

YAL035W

1002

112268

5.8

FUN12 SGDID:S000000033, Chr I from 76428-79436, Verified ORF, "GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23681.23681.3	4.8992	0.3808	100.0%	3570.3542	3564.6348	1	6.468	25.0%	3	R.LLVVGPEDDEDELMDDVMDDLTGLLDSVDTTGK.G	3

YKL064W

969

109736

7.5

MNR2 SGDID:S000001547, Chr XI from 317408-320317, Verified ORF, "Putative magnesium transporter; has similarity to Alr1p and Alr2p, which mediate influx of Mg2+ and other divalent cations"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26929.26929.3	3.4347	0.2198	91.7%	3542.2744	3535.7603	132	3.861	19.4%	1	S.NDIIKSEDPSLKGAFIDHRPSMSQPREGPQSV.S	3

YOR329C

872

97305

7.8

SCD5 SGDID:S000005856, Chr XV from 939344-936726, reverse complement, Verified ORF, "Protein required for normal cortical actin organization and endocytosis; multicopy suppressor of clathrin deficiency; acts as a targeting subunit for protein phosphatase type 1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27836.27836.3	3.1324	0.1274	93.5%	3131.6343	3129.622	197	4.018	21.4%	1	L.SHFKQIQTVDSASLPISSVFLQNGNTLPT.S	3

Reverse_YOR090C

572

63669

8.6

PTC5 SGDID:S000005616, Chr XV from 492842-491124, reverse complement, Verified ORF, "Mitochondrially localized type 2C protein phosphatase; contains Mg2+/Mn2+-dependent casein phosphatase activity in vitro but in vivo substrates are unknown"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39736.39736.3	2.5258	0.2285	97.2%	1998.8043	2000.1544	223	4.23	30.6%	1	S.GSLLAINLAKSHSSIFLKT.R	3

YOR310C

511

56956

8.9

NOP58 SGDID:S000005837, Chr XV from 898355-896820, reverse complement, Verified ORF, "Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10593.10593.2	4.5157	0.3286	100.0%	1960.4922	1959.9398	1	7.629	75.0%	3	K.ASETDLSEILPEEIEER.V	2

YPL231W

3.2%

1887

206945

5.4

FAS2 SGDID:S000006152, Chr XVI from 108652-114315, Verified ORF, "Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains beta-ketoacyl reductase and beta-ketoacyl synthase activities"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25396.25396.3	6.0336	0.4019	100.0%	3400.4343	3398.6167	1	6.726	27.5%	21	K.EFGTTPEKPEETPLEELAETFQDTFSGALGK.Q	3
*	22_g_01_itms.21000.21000.3	5.1588	0.2612	100.0%	3487.5544	3487.6758	1	5.122	32.1%	9	K.DWVENELEALKLEAEEIPSEDQNEFLLER.T	3
*	22_g_01_itms.09243.09243.2	5.1946	0.4111	100.0%	2162.2322	2161.03	1	7.585	70.6%	2	K.LEAEEIPSEDQNEFLLER.T	2

YPL174C

3.2%

868

100290

5.8

NIP100 SGDID:S000006095, Chr XVI from 222772-220166, reverse complement, Verified ORF, "Large subunit of the dynactin complex, which is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35499.35499.3	2.8875	0.1998	99.0%	3288.9844	3292.718	8	4.644	22.2%	1	F.LYPSCDITLSSILTILFSDALFLRQDYK.R	3

Reverse_YGR014W

1306

133114

4.2

MSB2 SGDID:S000003246, Chr VII from 516947-520867, Verified ORF, "Mucin family member at the head of the Cdc42p- and MAP kinase-dependent filamentous growth signaling pathway; also functions as an osmosensor in parallel to the Sho1p-mediated pathway; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22483.22483.3	3.2827	0.2052	96.6%	3608.4243	3604.4263	85	4.217	17.3%	1	E.LTGADQYSNGSSSSVGSNSNSGSGSSGSNSNSSSSGDSSG.G	3

Reverse_YIL002C

946

108430

6.7

INP51 SGDID:S000001264, Chr IX from 353428-350588, reverse complement, Verified ORF, "Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31819.31819.3	3.164	0.1825	98.1%	3038.5144	3040.4426	311	4.313	21.4%	1	R.KPEPIPTPSHTPGAISDSGEFSEIVFADD.S	3

Reverse_YNL325C

879

101746

5.7

FIG4 SGDID:S000005269, Chr XIV from 31377-28738, reverse complement, Verified ORF, "Protein required for efficient mating, member of a family of eukaryotic proteins that contain a domain homologous to Sac1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26690.26690.3	2.6897	0.0157	92.3%	3089.1543	3083.51	315	3.916	22.1%	1	Q.LAITDGLDHFLETLINVIDSDYELYSN.D	3

Reverse_YJL090C

764

87241

9.0

DPB11 SGDID:S000003626, Chr X from 264967-262673, reverse complement, Verified ORF, "Essential BRCT repeat protein, required on the prereplicative complex at replication origins for loading DNA polymerases to initiate DNA synthesis, also required for S/M checkpoint control"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.46021.46021.3	1.8686	0.1488	97.9%	2791.8245	2790.352	33	4.297	19.6%	1	D.NHSSTDKIVFNQYNYSSCGLKKIS.R	3

YKL217W

616

69376

5.9

JEN1 SGDID:S000001700, Chr XI from 22234-24084, Verified ORF, "Lactate transporter, required for uptake of lactate and pyruvate; expression is derepressed by transcriptional activator Cat8p under nonfermentative growth conditions, and repressed in the presence of glucose, fructose, and mannose"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11233.11233.2	2.3113	0.1121	92.0%	2096.372	2092.1958	32	4.368	33.3%	1	G.LVLFVRSAGAVIFGLWTDK.S	2

Reverse_YDR323C

515

59443

8.4

PEP7 SGDID:S000002731, Chr IV from 1114022-1112475, reverse complement, Verified ORF, "Multivalent adaptor protein that facilitates vesicle-mediated vacuolar protein sorting by ensuring high-fidelity vesicle docking and fusion, which are essential for targeting of vesicles to the endosome; required for vacuole inheritance"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33464.33464.3	2.3714	0.144	94.8%	1865.5443	1865.022	146	4.086	33.3%	1	I.GSLPMRVDKNFKRGIF.L	3

Reverse_YDL238C

489

55204

6.0

GUD1 SGDID:S000002397, Chr IV from 30454-28985, reverse complement, Verified ORF, "Guanine deaminase, a catabolic enzyme of the guanine salvage pathway producing xanthine and ammonia from guanine; activity is low in exponentially-growing cultures but expression is increased in post-diauxic and stationary-phase cultures"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07611.07611.2	2.1708	0.1605	94.1%	1686.6322	1687.923	9	4.436	46.4%	1	N.RTKDKGIIDVVTVDE.P	2

Reverse_YOL126C

423

46170

7.3

MDH2 SGDID:S000005486, Chr XV from 83057-81786, reverse complement, Verified ORF, "Cytoplasmic malate dehydrogenase, one of the three isozymes that catalyze interconversion of malate and oxaloacetate; involved in gluconeogenesis during growth on ethanol or acetate as carbon source; interacts with Pck1p and Fbp1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.06770.06770.3	2.3895	0.1362	93.4%	1312.5844	1314.5748	24	4.017	33.3%	1	L.CNEIGGAPSHSSV.S	3

YJR132W

1048

119983

4.7

NMD5 SGDID:S000003893, Chr X from 669437-672583, Verified ORF, "Karyopherin, a carrier protein involved in nuclear import of proteins; importin beta homolog"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.31315.31315.3	3.1837	0.166	93.4%	3659.5144	3657.0508	86	3.976	20.8%	1	E.QCVVQKTTWKLVGPHYNVILQHVIFPLLKPT.A	3

YEL032W

971

107517

5.5

MCM3 SGDID:S000000758, Chr V from 86937-89852, Verified ORF, "Protein involved in DNA replication; component of the Mcm2-7 hexameric complex that binds chromatin as a part of the pre-replicative complex"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08996.08996.3	4.6646	0.3229	100.0%	3292.7944	3291.3872	1	5.828	25.9%	2	R.FQDDEQNAGEDDNDIMSPLPADEEAELQR.R	3

Reverse_YNR047W

893

100546

8.0

YNR047W SGDID:S000005330, Chr XIV from 708525-711206, Uncharacterized ORF, "Putative protein kinase that, when overexpressed, interferes with pheromone-induced growth arrest; localizes to the cytoplasm; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.18379.18379.3	3.5884	0.1337	91.1%	3112.9143	3106.7014	355	3.844	21.2%	1	D.AAGMKCGLRKSENKTLLKKILDKCTRS.I	3

YJL047C

842

99326

7.6

RTT101 SGDID:S000003583, Chr X from 352024-349496, reverse complement, Verified ORF, "Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; deletion phenotype suggests a role in anaphase progression; interacts with Mms22p and implicated in Mms22-dependent DNA repair; modified by the ubiquitin-like protein, Rub1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.30315.30315.3	3.6267	0.252	98.6%	3302.7244	3303.5242	12	5.04	25.0%	1	H.VLSFLTRCDYSYEIIPKNWTSFYKL.F	3

YOL152W

629

71997

9.1

FRE7 SGDID:S000005512, Chr XV from 40747-42636, Verified ORF, "Putative ferric reductase with similarity to Fre2p; expression induced by low copper levels"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22205.22205.2	2.337	0.1735	91.9%	1985.1322	1983.0876	67	4.342	33.3%	2	Y.LGIPTSVGTFLVVMATTLY.T	2

YMR279C

540

59562

8.2

YMR279C SGDID:S000004892, Chr XIII from 826350-824728, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38101.38101.2	1.9804	0.1485	93.3%	1928.0922	1927.882	176	5.112	36.7%	1	F.SIFKKKTSVQGTDSEI.D	2

YKL221W

473

52342

8.8

MCH2 SGDID:S000001704, Chr XI from 6108-7529, Verified ORF, "Protein with similarity to mammalian monocarboxylate permeases, which are involved in transport of monocarboxylic acids across the plasma membrane; mutant is not deficient in monocarboxylate transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.06757.06757.2	2.2213	0.1033	95.8%	1146.5122	1147.596	137	4.578	50.0%	1	R.SLASGIGTAGSGLG.G	2

YLR383W

1114

128008

7.5

SMC6 SGDID:S000004375, Chr XII from 885288-888632, Verified ORF, "Protein involved in structural maintenance of chromosomes; required for interchromosomal and sister chromatid recombination; homologous to S. pombe rad18"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22679.22679.3	3.7776	0.188	96.3%	3786.8943	3782.9712	260	4.181	19.4%	1	Q.MRQELEQLEKANEKLREVNNSLVVSLQDVKNE.E	3

YER110C

1113

122601

4.6

KAP123 SGDID:S000000912, Chr V from 382099-378758, reverse complement, Verified ORF, "Karyopherin beta, mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07009.07009.3	5.3312	0.3531	100.0%	3582.8342	3580.4993	1	6.351	29.8%	1	K.VACEEIDVDDELNNEDETGENEENTPSSSAIR.L	3

YNL233W

892

100590

5.1

BNI4 SGDID:S000005177, Chr XIV from 211923-214601, Verified ORF, "Targeting subunit for Glc7p protein phosphatase, localized to the bud neck, required for localization of chitin synthase III to the bud neck via interaction with the chitin synthase III regulatory subunit Skt5p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23862.23862.3	2.4119	0.1558	91.9%	2955.7744	2950.458	6	3.887	24.0%	1	N.MDLILGGDKQINTPLQEHVREDDDAK.N	3

Reverse_YPR181C

768

85385

5.7

SEC23 SGDID:S000006385, Chr XVI from 899663-897357, reverse complement, Verified ORF, "GTPase-activating protein; component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat, involved in ER to Golgi transport and autophagy; stimulates the GDP-bound form of Sar1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27243.27243.2	2.4823	0.2257	97.2%	2280.3123	2283.2283	24	4.781	31.0%	1	A.KHVAIRAMLVAAAEQDFSAAIA.P	2

Reverse_YBR238C

731

83761

7.5

YBR238C SGDID:S000000442, Chr II from 697297-695102, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.13034.13034.2	3.0259	0.2981	97.8%	2260.2522	2259.1199	127	4.813	35.0%	1	H.PVFHNAPSVQYTALAPNNFTA.P	2

Reverse_YOR372C

554

60523

9.5

NDD1 SGDID:S000005899, Chr XV from 1036467-1034803, reverse complement, Verified ORF, "Transcriptional activator essential for nuclear division; localized to the nucleus; essential component of the mechanism that activates the expression of a set of late-S-phase-specific genes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38578.38578.2	1.9561	0.2357	95.7%	1831.9922	1832.9507	165	4.617	33.3%	1	N.SKLLNNLDVNSFVNQQ.Q	2

YKL211C

484

53489

6.9

TRP3 SGDID:S000001694, Chr XI from 38154-36700, reverse complement, Verified ORF, "Bifunctional enzyme exhibiting both indole-3-glycerol-phosphate synthase and anthranilate synthase activities, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07833.07833.2	2.6836	0.2135	91.4%	1561.4321	1560.7659	8	4.331	53.8%	1	R.NILNVSGGTWEENK.S	2

Reverse_YNL287W

935

104831

5.1

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10814.10814.3	3.1118	0.2759	98.2%	3134.0942	3133.3584	311	5.315	24.0%	1	F.SDTNSSIYSSLKSELSPIDYFYKSEI.L	3

Reverse_YPR029C

832

93624

5.5

APL4 SGDID:S000006233, Chr XVI from 626964-624466, reverse complement, Verified ORF, "Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in vesicle mediated transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21615.21615.2	2.219	0.1997	92.1%	2470.3323	2467.2986	4	4.374	31.8%	1	E.PSSLFGLSTLALSVAYKNPHHLD.N	2

Reverse_YOR035C

789

89553

5.6

SHE4 SGDID:S000005561, Chr XV from 400103-397734, reverse complement, Verified ORF, "Protein containing a UCS (UNC-45/CRO1/SHE4) domain, binds to myosin motor domains to regulate myosin function; involved in endocytosis, polarization of the actin cytoskeleton, and asymmetric mRNA localization"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.16859.16859.2	2.6072	0.256	91.1%	2556.5122	2560.3984	11	5.06	33.3%	1	F.LFPIANLAS*YKKFILGPNTFIL.M	2

Reverse_YLR337C

817

82594

9.9

VRP1 SGDID:S000004329, Chr XII from 805106-802653, reverse complement, Verified ORF, "Proline-rich, actin-associated protein involved in cytoskeletal organization and cytokinesis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33258.33258.3	2.4101	0.1368	98.5%	2089.4644	2090.165	44	4.382	26.1%	1	P.VAPAPSLPANPIPPAAVSPVAGP.I	3

YGR178C

722

78782

6.9

PBP1 SGDID:S000003410, Chr VII from 853220-851052, reverse complement, Verified ORF, "Protein interacting with poly(A)-binding protein Pab1p; likely involved in control of the extent of mRNA polyadenylation; also interacts with Mkt1p to form a complex that may regulate translation of the HO mRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10433.10433.2	3.9019	0.3964	100.0%	2181.392	2181.02	1	7.056	52.6%	1	R.GIIIDDSGLDEEDLYSGVDR.R	2

Reverse_YGL150C

1489

171455

5.7

INO80 SGDID:S000003118, Chr VII from 225578-221109, reverse complement, Verified ORF, "ATPase that forms a large complex, containing actin and several actin-related proteins, that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro; shows similarity to the Snf2p family of ATPases"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33482.33482.3	2.3466	0.2065	94.3%	4315.1045	4311.9883	14	4.895	17.9%	1	N.NGDENEDGNVTVVTDAHTQDDKIAKGIAAAAAADKKRSKQ.I	3

YDL073W

984

113891

7.9

YDL073W SGDID:S000002231, Chr IV from 326613-329567, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.37026.37026.2	1.5721	0.3407	100.0%	3255.112	3255.5784	1	5.918	19.2%	1	D.FHFDTILLLTVSPQISSSIQTSLFSWK.K	2

YCR026C

742

84734

4.6

NPP1 SGDID:S000000621, Chr III from 166334-164106, reverse complement, Verified ORF, "Nucleotide pyrophosphatase/phosphodiesterase family member; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09157.09157.2	2.2655	0.1846	90.4%	2268.672	2268.1045	38	4.282	31.6%	1	R.KDYVSHAYLEGPMMAISLKD.S	2

Reverse_YNL218W

587

66544

8.4

MGS1 SGDID:S000005162, Chr XIV from 238239-240002, Verified ORF, "Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome; interacts functionally with DNA polymerase delta; homolog of human Werner helicase interacting protein (WHIP)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.15839.15839.2	2.2486	0.101	92.6%	1891.2922	1887.9315	135	4.379	33.3%	1	A.VYLPDEGGQLMRALYY.L	2

YIR019C

1367

136110

4.3

MUC1 SGDID:S000001458, Chr IX from 393672-389569, reverse complement, Verified ORF, "GPI-anchored cell surface glycoprotein required for diploid pseudohyphal formation and haploid invasive growth, transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	22_g_01_itms.09542.09542.3	3.3936	0.1458	92.3%	3309.2944	3313.4568	56	3.913	19.1%	2	T.TESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSS.A	3

YDR128W

1148

130946

5.9

YDR128W SGDID:S000002535, Chr IV from 709544-712990, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.29719.29719.3	3.4365	0.1658	98.6%	3343.3743	3348.701	353	4.49	20.7%	1	K.QGSRAISSSPFHSRMPDIKVELLHDDIIEA.Y	3

YCR067C

1065

114079

4.7

SED4 SGDID:S000000663, Chr III from 236317-233120, reverse complement, Verified ORF, "Integral endoplasmic reticulum membrane protein, functions as a positive regulator of Sar1p probably through inhibition of GTPase activation by Sec23p; binds Sec16p, participates in vesicle formation, similar to Sec12p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09566.09566.3	3.9775	0.2174	90.0%	3090.5044	3091.355	135	4.74	21.3%	1	S.VASNLIPNEEILSTSASQDSISSHPSTF.S	3

YHR027C

993

109492

4.6

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.30176.30176.2	1.9095	0.2047	96.5%	2587.652	2583.2942	245	4.669	24.0%	1	L.YVDEPEVKAGALLGIGISASGVHDGE.V	2

YMR031C

843

93345

6.3

YMR031C SGDID:S000004633, Chr XIII from 334742-332211, reverse complement, Uncharacterized ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.30946.30946.2	2.0781	0.1592	90.5%	2373.0322	2370.0374	1	4.31	35.7%	1	D.SLEHTFSGFSQGSSIEDDQDAI.S	2

YFL009W

779

86090

7.1

CDC4 SGDID:S000001885, Chr VI from 116139-118478, Verified ORF, "F-box protein required for G1/S and G2/M transition, associates with Skp1p and Cdc53p to form a complex, SCFCdc4, which acts as ubiquitin-protein ligase directing ubiquitination of the phosphorylated CDK inhibitor Sic1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10197.10197.2	2.0438	0.1125	90.0%	2002.3522	1998.9005	137	4.264	31.6%	1	T.GAASVDNDGLHNLTDISNDA.E	2

YDR172W

685

76551

7.0

SUP35 SGDID:S000002579, Chr IV from 808319-810376, Verified ORF, "Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a dominant cytoplasmically inherited protein aggregate that alters translational fidelity and creates a nonsense suppressor phenotype"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10495.10495.2	5.1549	0.5166	100.0%	2068.912	2068.8657	1	9.807	67.6%	5	K.EQEEEVDDEVVNDMFGGK.D	2
*	22_g_01_itms.10515.10515.3	3.7712	0.1525	99.0%	2071.1042	2068.8657	1	4.607	38.2%	2	K.EQEEEVDDEVVNDMFGGK.D	3

Reverse_YIR006C

1480

160266

5.3

PAN1 SGDID:S000001445, Chr IX from 369905-365463, reverse complement, Verified ORF, "Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on the cell cortex; promotes protein-protein interactions essential for endocytosis; previously thought to be a subunit of poly(A) ribonuclease"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.20176.20176.3	3.7525	0.2076	98.9%	3762.2344	3761.7612	36	4.674	19.4%	1	M.VSGYGGTYQSQLAGGTLQPGLNVGFSTQPMMGTTQPM.M	3

YDR069C

926

105192

8.2

DOA4 SGDID:S000002476, Chr IV from 587716-584936, reverse complement, Verified ORF, "Ubiquitin hydrolase, required for recycling ubiquitin from proteasome-bound ubiquitinated intermediates, acts at the late endosome/prevacuolar compartment to recover ubiquitin from ubiquitinated membrane proteins en route to the vacuole"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.30620.30620.2	2.2503	0.2331	95.5%	2555.3323	2556.226	21	4.495	27.3%	1	M.SPSIRHSMDDSMKEMLVAPTPLN.H	2

Reverse_YOL006C

769

89995

8.7

TOP1 SGDID:S000005366, Chr XV from 315387-313078, reverse complement, Verified ORF, "Topoisomerase I, nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07261.07261.3	2.9718	0.1915	95.3%	2094.3245	2092.1038	5	4.136	34.7%	1	V.SLRPDIYNIKSTGLSVQSN.E	3

YLL018C

557

63516

6.6

DPS1 SGDID:S000003941, Chr XII from 111574-109901, reverse complement, Verified ORF, "Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.06708.06708.2	2.452	0.1847	96.4%	1626.0922	1625.7183	25	4.673	50.0%	2	K.EIGDFEDLSTENEK.F	2

YOR124C

1272

146354

5.2

UBP2 SGDID:S000005650, Chr XV from 558642-554824, reverse complement, Verified ORF, "Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C terminus of ubiquitin fusions; capable of cleaving polyubiquitin and possesses isopeptidase activity"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35758.35758.3	3.1331	0.0429	91.7%	3564.7444	3557.7434	67	3.868	21.7%	1	E.CNISELNEATLLSIYKYETSNKSQVTSNHLT.N	3

YOR330C

1254

143502

8.8

MIP1 SGDID:S000005857, Chr XV from 943380-939616, reverse complement, Verified ORF, "Catalytic subunit of the mitochondrial DNA polymerase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.13729.13729.3	3.0301	0.0316	94.3%	3677.3643	3672.0205	7	4.058	22.4%	1	I.KDIVLLKDKPDFYLKDPWLSQLDWTTKPLR.L	3

Reverse_YDR507C

1142

129858

9.2

GIN4 SGDID:S000002915, Chr IV from 1465776-1462348, reverse complement, Verified ORF, "Protein kinase involved in bud growth and assembly of the septin ring, proposed to have kinase-dependent and kinase-independent activities; undergoes autophosphorylation; similar to Kcc4p and Hsl1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22047.22047.2	2.1592	0.134	95.9%	3241.2722	3239.6582	3	4.646	30.8%	1	R.IKQVSKNLPPEMDDVVKERKEQDEEQK.H	2

YGR162W

952

107101

6.0

TIF4631 SGDID:S000003394, Chr VII from 824064-826922, Verified ORF, "Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that also contains eIF4E (Cdc33p); associates with the poly(A)-binding protein Pab1p, also interacts with eIF4A (Tif1p); homologous to Tif4632p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14484.14484.2	3.0995	0.2659	99.3%	2554.3323	2553.2036	2	4.979	31.8%	2	K.DATPIEDVFSFNYPEGIEGPDIK.Y	2

YJL094C

873

97111

6.1

KHA1 SGDID:S000003630, Chr X from 254358-251737, reverse complement, Verified ORF, "Putative K+/H+ antiporter"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35488.35488.2	2.1019	0.2419	95.2%	2331.8523	2328.2917	289	5.187	27.5%	1	E.IVVLT*VGLNAGIISRKIFGMF.V	2

YLR234W

656

74371

8.5

TOP3 SGDID:S000004224, Chr XII from 609785-611755, Verified ORF, "DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially, involved in telomere stability and regulation of mitotic recombination"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.02102.02102.3	2.3511	0.1234	90.7%	1855.0443	1857.8342	170	3.82	30.0%	1	G.IDFSHDSHGWGKCAIQ.E	3

Reverse_YNL088W

1428

164214

7.0

TOP2 SGDID:S000005032, Chr XIV from 457706-461992, Verified ORF, "Essential type II topoisomerase, relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone of both positively and negatively supercoiled DNA; cleaves complementary strands; localizes to axial cores in meiosis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.24744.24744.3	3.6436	0.146	92.6%	3654.0842	3658.564	151	3.927	19.5%	1	Y.LEEPGNIVNETDEHSSEEDEEDSTAGKVDNIQE.A	3

Reverse_YBL085W

980

109295

9.1

BOI1 SGDID:S000000181, Chr II from 63873-66815, Verified ORF, "Protein implicated in polar growth, functionally redundant with Boi2p; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.17576.17576.2	2.6863	0.1818	97.5%	2680.2322	2678.4492	46	4.782	27.3%	1	V.RPETFTLGKKSGPQPPVLKFCYK.G	2

YOR038C

875

98445

8.3

HIR2 SGDID:S000005564, Chr XV from 405387-402760, reverse complement, Verified ORF, "Non-essential transcriptional corepressor involved in the cell cycle-regulated transcription of histone H2A, H2B, H3, and H4 genes; recruits Swi-Snf complexes to histone gene promoters; promotes heterochromatic gene silencing with Asf1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.29269.29269.3	2.3759	0.0141	91.9%	1952.0343	1950.0773	178	3.878	31.6%	1	S.ASAAPIPNDIGRSAVGKKPT.K	3

Reverse_YGR196C

817

90798

4.6

FYV8 SGDID:S000003428, Chr VII from 892191-889738, reverse complement, Verified ORF, "Protein of unknown function, required for survival upon exposure to K1 killer toxin"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.36612.36612.3	2.1843	0.1536	93.5%	1943.3043	1944.0038	25	4.021	34.7%	1	K.TENAVPKPKAVKDQGSSTS.N	3

YBR142W

773

87048

8.4

MAK5 SGDID:S000000346, Chr II from 528311-530632, Verified ORF, "Essential nucleolar protein, putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07471.07471.2	4.04	0.2942	100.0%	1989.7522	1986.8069	1	6.691	58.8%	2	K.AADELGIDVDS*DEDDISK.S	2

YOL057W

711

80510

6.3

YOL057W SGDID:S000005418, Chr XV from 220765-222900, Uncharacterized ORF, "Putative metalloprotease"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.37770.37770.3	2.2741	0.0705	91.9%	1563.1144	1564.8447	1	3.886	43.3%	1	L.GNILSAAAKSSSKHPP.S	3

YOL141W

695

78975

7.0

PPM2 SGDID:S000005501, Chr XV from 56450-58537, Verified ORF, "Putative carboxyl methyl transferase, has similarity to Ppm1p but biochemical activity not yet demonstrated"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08841.08841.3	2.3543	0.081	92.2%	1843.4343	1843.037	9	3.909	40.0%	1	I.ILEQLIPKGPFEPFSK.Q	3

YDL063C

620

70164

5.2

YDL063C SGDID:S000002221, Chr IV from 340134-338272, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.30047.30047.3	1.2526	0.1434	92.2%	1595.2444	1593.7073	220	3.907	36.5%	1	M.TNSLFQIYGDASYD.Y	3

Reverse_YPL194W

612

69694

6.6

DDC1 SGDID:S000006115, Chr XVI from 179276-181114, Verified ORF, "DNA damage checkpoint protein, part of a PCNA-like complex required for DNA damage response, required for pachytene checkpoint to inhibit cell cycle in response to unrepaired recombination intermediates; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.22793.22793.2	2.3348	0.2001	92.8%	1543.0122	1545.7471	11	4.395	46.2%	1	R.PKEVQTLGLGDEME.K	2

YNL275W

576

65028

7.8

YNL275W SGDID:S000005219, Chr XIV from 119268-120998, Verified ORF, "Plasma membrane protein that binds HCO3-, I-, Br-, NO3- and Cl- ; putative boron efflux transporter with similarity to A. thaliana BOR1 which is a known boron efflux transporter"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38338.38338.3	1.8963	0.1605	92.3%	1342.4644	1342.7041	259	3.906	29.2%	1	L.VCLGEIPQAVLSG.L	3

YLR259C

572

60752

5.3

HSP60 SGDID:S000004249, Chr XII from 665004-663286, reverse complement, Verified ORF, "Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; similarity to groEL"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08732.08732.2	3.9917	0.3256	100.0%	1522.1522	1521.7107	1	6.936	62.5%	2	R.TLEDELEVTEGMR.F	2

Reverse_YGL197W

1487

167074

7.7

MDS3 SGDID:S000003165, Chr VII from 124703-129166, Verified ORF, "Protein with an N-terminal kelch-like domain, putative negative regulator of early meiotic gene expression; required, with Pmd1p, for growth under alkaline conditions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.32540.32540.2	1.6366	0.2548	99.6%	1092.0322	1092.565	64	5.214	50.0%	1	F.PKGSASSTRTT.S	2
*	22_g_01_itms.35388.35388.2	2.5326	0.2235	96.9%	2453.4722	2452.432	1	4.764	32.5%	1	L.SLSEEKKALISYLVELILKYL.L	2

Reverse_YBL007C

1244

135848

5.9

SLA1 SGDID:S000000103, Chr II from 216369-212635, reverse complement, Verified ORF, "Cytoskeletal protein binding protein required for assembly of the cortical actin cytoskeleton; contains 3 SH3 domains; interacts with proteins regulating actin dynamics and with proteins required for endocytosis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11240.11240.2	2.6212	0.1696	90.5%	2491.8323	2488.3298	12	4.318	28.8%	1	D.LPAPASSVPASSVPAAPVTTGGTKVPE.L	2

Reverse_YOR109W

1107

124577

7.2

INP53 SGDID:S000005635, Chr XV from 525278-528601, Verified ORF, "Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in a TGN (trans Golgi network)-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.26558.26558.2	2.0082	0.1732	90.2%	2439.4321	2443.302	186	4.281	26.1%	1	V.TEGPCPQAVKSKGTIAGVFLLGNV.E	2

Reverse_YBL052C

831

97582

6.5

SAS3 SGDID:S000000148, Chr II from 121877-119382, reverse complement, Verified ORF, "Histone acetyltransferase catalytic subunit of NuA3 complex that acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; sas3 gcn5 double mutation confers lethality"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.14191.14191.2	2.3165	0.1807	95.3%	2246.3523	2249.9258	24	4.477	35.3%	1	N.KYDCMYETLSSVTDEFFD.T	2

YBR202W

845

94875

5.3

CDC47 SGDID:S000000406, Chr II from 625767-628304, Verified ORF, "Component of the hexameric MCM complex, which is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38677.38677.3	2.3032	0.3188	97.6%	2279.6643	2283.1274	160	4.982	30.6%	1	K.VANRELNS*VIIDLDDILQY.Q	3

Reverse_YGR261C

809

91607

5.8

APL6 SGDID:S000003493, Chr VII from 1016756-1014327, reverse complement, Verified ORF, "Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35359.35359.3	1.9655	0.1316	94.0%	1973.5443	1972.0616	36	4.045	30.9%	1	E.LRASVIFDDSRATPKPAQ.L	3

Reverse_YJL168C

733

84540

8.5

SET2 SGDID:S000003704, Chr X from 104421-102220, reverse complement, Verified ORF, "Histone methyltransferase with a role in transcriptional elongation, methylates a lysine residue of histone H3; associates with the C-terminal domain of Rpo21p; histone methylation activity is regulated by phosphorylation status of Rpo21p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.17431.17431.3	2.8249	0.0724	96.3%	1983.4744	1985.1198	67	4.182	36.7%	1	G.NEHIIEWGPPLRVRRL.D	3

Reverse_YKR098C

717

82703

8.4

UBP11 SGDID:S000001806, Chr XI from 634817-632664, reverse complement, Verified ORF, "Ubiquitin-specific protease that cleaves ubiquitin from ubiquitinated proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33919.33919.3	2.6145	0.196	98.6%	1700.1244	1701.9064	2	4.508	40.0%	1	E.IVPLNYAKPASSEIAE.I	3

YJR016C

585

62861

7.8

ILV3 SGDID:S000003777, Chr X from 466122-464365, reverse complement, Verified ORF, "Dihydroxyacid dehydratase, catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.05081.05081.2	4.3911	0.2596	100.0%	1433.1322	1431.6604	3	5.278	70.8%	1	R.DGDEIIIDADNNK.I	2

YHR019C

554

62207

5.8

DED81 SGDID:S000001061, Chr VIII from 143551-141887, reverse complement, Verified ORF, "Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11501.11501.2	2.334	0.1744	99.3%	1386.5521	1384.6129	1	5.173	63.6%	1	R.IDDMDELMAGFK.R	2

YGL133W

2.1%

1264

145642

5.7

ITC1 SGDID:S000003101, Chr VII from 257712-261506, Verified ORF, "Component of the ATP-dependent Isw2p-Itc1p chromatin remodeling complex, required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.16196.16196.3	3.1	0.1655	90.4%	3111.6543	3110.449	348	3.805	21.0%	1	L.FINEEGDWSCIVVENWIIDDKGVLME.R	3

YBL051C

2.1%

668

73776

6.2

PIN4 SGDID:S000000147, Chr II from 124762-122756, reverse complement, Verified ORF, "Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.10188.10188.2	1.9973	0.2023	95.7%	1378.7922	1377.661	56	4.604	46.2%	1	N.NNSASSTPKISSQG.Q	2

YKL182W

2051

228689

5.9

FAS1 SGDID:S000001665, Chr XI from 100676-106831, Verified ORF, "Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09567.09567.2	3.5516	0.427	100.0%	2498.4521	2497.2349	7	6.907	32.6%	2	K.ILPEPTEGFAADDEPTTPAELVGK.F	2
*	22_g_01_itms.11245.11245.2	4.3468	0.3928	100.0%	1855.5521	1853.8921	1	7.534	73.3%	2	K.DIQIPVYDTFDGSDLR.V	2

YNL091W

1240

141514

5.4

NST1 SGDID:S000005035, Chr XIV from 452410-456132, Verified ORF, "Protein of unknown function, mediates sensitivity to salt stress; interacts physically with the splicing factor Msl1p and also displays genetic interaction with MSL1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23409.23409.3	3.4156	0.1213	91.3%	3237.8643	3237.876	34	3.846	25.0%	1	N.NRLKLLQELEEEKRKKREKEEKKQK.K	3

Reverse_YJL076W

1189

128531

7.8

NET1 SGDID:S000003612, Chr X from 295161-298730, Verified ORF, "Core subunit of the RENT complex, which is a complex involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35298.35298.2	1.984	0.2088	92.4%	2555.2522	2559.5322	1	4.375	32.6%	1	N.KKAGALLQAARKAASRPTRQPLIN.R	2

Reverse_YML010W

1063

115650

5.2

SPT5 SGDID:S000004470, Chr XIII from 247677-250868, Verified ORF, "Protein that forms a complex with Spt4p and mediates both activation and inhibition of transcription elongation; Spt4p-Spt5p complex also plays a role in pre-mRNA processing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08623.08623.2	2.1757	0.2047	96.7%	2484.4722	2480.286	40	4.71	30.0%	1	E.DFKGYDLRPVIKLMVELNNES.I	2

Reverse_YNL327W

1041

108495

4.8

EGT2 SGDID:S000005271, Chr XIV from 24047-27172, Verified ORF, "Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase required for proper cell separation after cytokinesis, expression is activated by Swi5p and tightly regulated in a cell cycle-dependent manner"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35458.35458.3	2.4073	0.3268	99.7%	2075.3643	2074.9417	111	5.07	30.0%	1	T.TFTSNSSSPASLSISSSSAQE.S	3

YJL130C

2214

245123

5.9

URA2 SGDID:S000003666, Chr X from 172285-165641, reverse complement, Verified ORF, "Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07037.07037.2	3.3343	0.4123	100.0%	1587.8522	1586.6896	1	7.408	57.7%	2	K.ELTSMDEAESFAEK.V	2
*	22_g_01_itms.13771.13771.2	3.3626	0.3253	100.0%	2957.9321	2957.4268	3	5.763	32.7%	1	R.FSITEEAIADNLDAAEDAIPEQPLEQK.L	2
*	22_g_01_itms.13865.13865.3	4.0022	0.1648	98.7%	2958.2944	2957.4268	68	4.388	25.0%	3	R.FSITEEAIADNLDAAEDAIPEQPLEQK.L	3

Reverse_YNL273W

1238

141120

6.1

TOF1 SGDID:S000005217, Chr XIV from 122883-126599, Verified ORF, "Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p) that acts at the stalled replication fork to promote sister chromatid cohesion after DNA damage, facilitating gap repair of damaged DNA; interacts with the MCM helicase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07508.07508.3	2.9812	0.1336	90.1%	2671.9744	2672.426	13	3.797	28.3%	1	K.NWKKSDDLKQLAIKEDVLAQSGSV.T	3

Reverse_YDL215C

1092

124332

5.7

GDH2 SGDID:S000002374, Chr IV from 73919-70641, reverse complement, Verified ORF, "NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.25222.25222.2	2.1278	0.1686	94.3%	2423.652	2426.373	2	4.437	35.0%	1	E.DKNEVSRTTKIVPGEREKVLK.L	2

YGR100W

950

109259

5.4

MDR1 SGDID:S000003332, Chr VII from 690249-693101, Verified ORF, "Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p; involved in recycling of internalized proteins and regulation of Golgi secretory function"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08858.08858.3	2.9828	0.2048	97.4%	2190.3542	2186.2532	404	4.235	29.4%	1	P.MFRKLIRIGVPNRMRGEI.W	3

YMR275C

976

109174

8.7

BUL1 SGDID:S000004888, Chr XIII from 818580-815650, reverse complement, Verified ORF, "Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p, disruption causes temperature-sensitive growth, overexpression causes missorting of amino acid permeases"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.00240.00240.2	2.0824	0.1049	95.5%	2103.4321	2107.1511	6	4.484	36.1%	1	L.SINYTIDARIVGKDQKASK.L	2

YLR289W

645

73188

9.2

GUF1 SGDID:S000004280, Chr XII from 715091-717028, Verified ORF, "Mitochondrial GTPase of unknown function, similar to E. coli elongation factor-type GTP-binding protein LepA and to LK1236.1 from Caenorhabditis elegans"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.35418.35418.2	1.847	0.1033	97.0%	1268.0122	1266.6079	3	4.734	54.5%	1	V.AHVDHGKSTLSD.R	2

Reverse_YPL231W

1887

206945

5.4

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.37658.37658.2	1.8969	0.1081	91.8%	1470.7522	1469.8328	333	4.355	36.7%	1	Q.LLGQLVEAGISGKGAG.T	2
*	22_g_01_itms.13163.13163.2	2.4082	0.1861	93.3%	1427.8722	1429.7803	101	4.422	38.2%	1	A.AAAPAAAAVPAPAAAAPA.P	2

YOR116C

1460

162301

8.2

RPO31 SGDID:S000005642, Chr XV from 544145-539763, reverse complement, Verified ORF, "RNA polymerase III subunit C160, part of core enzyme; similar to bacterial beta-prime subunit"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08940.08940.3	2.8423	0.051	93.5%	2902.5244	2900.582	50	4.02	24.0%	1	K.TFHFAGVASMNVTLGVPRIKEIINASK.V	3

YBL076C

1072

122983

6.1

ILS1 SGDID:S000000172, Chr II from 84259-81041, reverse complement, Verified ORF, "Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.11579.11579.2	3.0927	0.1764	99.3%	1986.5322	1983.9988	1	5.026	58.3%	1	K.NGVISEDSVLPNAIDDLGR.F	2

Reverse_YBR038W

963

109882

8.6

CHS2 SGDID:S000000242, Chr II from 311897-314788, Verified ORF, "Chitin synthase II, requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for the synthesis of chitin in the primary septum during cytokinesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.32575.32575.2	2.3288	0.172	92.9%	2181.8523	2181.8909	55	5.184	37.5%	1	A.YRNPAVPSNHASDRYFQ.T	2

YBR086C

946

105854

9.0

IST2 SGDID:S000000290, Chr II from 423035-420195, reverse complement, Verified ORF, "Plasma membrane protein that may be involved in osmotolerance, localizes to the mother cell in small-budded cells and to the bud in medium- and large-budded cells; mRNA is transported to the bud tip by an actomyosin-driven process"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.34887.34887.3	2.4962	0.2619	92.1%	1781.8744	1778.7655	274	4.787	35.9%	1	K.VPTVGSYGVAGATLPET.I	3

Reverse_YKL171W

928

103956

8.8

YKL171W SGDID:S000001654, Chr XI from 127480-130266, Uncharacterized ORF, "Putative protein of unknown function; predicted protein kinase; implicated in proteasome function; epitope-tagged protein localizes to the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07741.07741.3	2.8184	0.1534	95.1%	2170.8542	2169.0916	206	4.133	35.9%	1	R.CREAFPIKSRKFEDWSI.V	3

Reverse_YLR386W

880

99772

5.5

VAC14 SGDID:S000004378, Chr XII from 893628-896270, Verified ORF, "Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; activator of Fab1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.06762.06762.3	2.4732	0.1163	91.4%	1840.5243	1844.2029	161	3.856	31.7%	1	S.LLKLLVSLIKSLFPIF.V	3

Reverse_YAL041W

854

96940

8.5

CDC24 SGDID:S000000039, Chr I from 62841-65405, Verified ORF, "Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p; required for polarity establishment and maintenance, and mutants have morphological defects in bud formation and shmooing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.45170.45170.2	2.1248	0.1985	94.8%	1531.2322	1533.9216	87	4.465	35.7%	1	S.ASISASTSSKKKLIL.S	2

Reverse_YHR072W

731

83461

6.5

ERG7 SGDID:S000001114, Chr VIII from 239100-241295, Verified ORF, "Lanosterol synthase, an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide, a step in ergosterol biosynthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07407.07407.2	2.346	0.1788	90.7%	1501.6921	1503.7517	3	4.323	58.3%	1	Q.CPFIGSDPEQLLK.F	2

YHL024W

713

80109

5.8

RIM4 SGDID:S000001016, Chr VIII from 56647-58788, Verified ORF, "Putative RNA-binding protein required for the expression of early and middle sporulation genes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38005.38005.2	1.7755	0.1444	96.5%	1415.2722	1412.7035	52	4.665	50.0%	1	H.NRKFSGKNGGSNF.N	2

Reverse_YNL008C

669

76741

6.5

ASI3 SGDID:S000004953, Chr XIV from 618221-616212, reverse complement, Verified ORF, "Putative integral membrane E3 ubiquitin ligase; genetic interactions suggest a role in negative regulation of amino acid uptake"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39292.39292.2	2.1413	0.3158	96.3%	1333.1322	1332.549	4	5.79	54.5%	1	L.TPASVITSNPSV.F	2

YIL166C

542

61898

8.9

YIL166C SGDID:S000001428, Chr IX from 32566-30938, reverse complement, Uncharacterized ORF, "Hypothetical protein, member of the Dal5p subfamily of the major facilitator family"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.34274.34274.3	2.3713	0.1377	99.0%	1199.5743	1201.6105	4	4.616	50.0%	2	H.KGKSLFTEYE.E	3

Reverse_YLR096W

1147

128338

9.4

KIN2 SGDID:S000004086, Chr XII from 332591-336034, Verified ORF, "Serine/threonine protein kinase involved in regulation of exocytosis; localizes to the cytoplasmic face of the plasma membrane; closely related to Kin1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23319.23319.2	2.5021	0.2081	95.1%	2230.132	2233.1003	9	4.473	34.2%	1	P.GTYPQAKLLEPAAFYLSGCF.T	2

YGR094W

1104

125770

7.0

VAS1 SGDID:S000003326, Chr VII from 672190-675504, Verified ORF, "Mitochondrial and cytoplasmic valyl-tRNA synthetase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39306.39306.3	2.3292	0.1716	91.7%	2022.5643	2023.1075	15	3.869	33.3%	1	K.TGEVIINPLKEDGSPKTPK.E	3

YDL215C

1092

124332

5.7

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.07088.07088.3	3.0881	0.1111	91.8%	1975.5243	1971.951	193	3.874	33.3%	1	P.NDDPAGVDISSQDLLKGDI.E	3

YMR273C

915

103358

6.4

ZDS1 SGDID:S000004886, Chr XIII from 813979-811232, reverse complement, Verified ORF, "Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencing; has a role in localization of Bcy1p, a regulatory subunit of protein kinase A; implicated in mRNA nuclear export"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33180.33180.3	2.1093	0.0601	93.4%	1717.3143	1713.8845	205	3.969	35.0%	1	A.ITLARTLSMAGSYSDK.K	3

YLR258W

705

80079

6.4

GSY2 SGDID:S000004248, Chr XII from 660718-662835, Verified ORF, "Glycogen synthase, similar to Gsy1p; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39729.39729.2	1.6754	0.101	90.6%	1321.0922	1320.7163	14	4.303	59.1%	1	K.SKAPITVAQYKD.H	2

Reverse_YIL026C

1.6%

1150

133009

5.1

IRR1 SGDID:S000001288, Chr IX from 307927-304475, reverse complement, Verified ORF, "Subunit of the cohesin complex, which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms, essential for viability"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33302.33302.3	2.3064	0.028	92.8%	2063.9343	2067.8604	396	3.951	30.9%	1	D.PDNNETNAHDTERESNPQ.L	3

Reverse_YGL216W

1.6%

805

91090

7.1

KIP3 SGDID:S000003184, Chr VII from 84884-87301, Verified ORF, "Kinesin-related motor protein involved in mitotic spindle positioning "

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.36534.36534.2	1.662	0.2211	95.3%	1207.9321	1205.5438	249	4.532	41.7%	1	S.DGLGPFNAEAGSA.E	2

Reverse_YLR399C

1.6%

686

76978

6.0

BDF1 SGDID:S000004391, Chr XII from 921596-919536, reverse complement, Verified ORF, "Protein involved in transcription initiation at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.37828.37828.2	1.5582	0.1061	91.2%	1281.8522	1283.5981	5	4.329	50.0%	1	D.FYTPLNMSVPD.V	2

U	YIL173W	1	1	1.5%	1549	174427	5.3	VTH1 SGDID:S000001435, Chr IX from 11492-16141, Verified ORF, "Putative membrane glycoprotein with strong similarity to Vth2p and Pep1p/Vps10p, may be involved in vacuolar protein sorting"
U	YJL222W	1	1	1.5%	1549	174401	5.3	VTH2 SGDID:S000003758, Chr X from 11475-16124, Verified ORF, "Putative membrane glycoprotein with strong similarity to Vth1p and Pep1p/Vps10p, may be involved in vacuolar protein sorting"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	22_g_01_itms.17451.17451.2	2.5706	0.3056	99.6%	2528.4321	2526.4329	305	5.188	22.7%	1	Y.NLIALSDICDKSKGKSVLVKPLQ.L	2

Reverse_YDR217C

1309

148397

5.3

RAD9 SGDID:S000002625, Chr IV from 903474-899545, reverse complement, Verified ORF, "DNA damage-dependent checkpoint protein, required for cell-cycle arrest in G1/S, intra-S, and G2/M; transmits checkpoint signal by activating Rad53p and Chk1p; hyperphosphorylated by Mec1p and Tel1p; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.46015.46015.3	2.2642	0.1895	96.2%	2033.5743	2037.0657	409	4.175	26.4%	1	E.LGVVVYENGDFTVADGIRI.D	3

Reverse_YDL195W

1273

138703

5.7

SEC31 SGDID:S000002354, Chr IV from 107209-111030, Verified ORF, "Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles, in complex with Sec13p; required for ER-derived transport vesicle formation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.38326.38326.3	2.4456	0.1046	94.3%	1889.2144	1886.0387	1	4.067	36.1%	1	A.NAPIGNLPTPTSLINPPAV.S	3

Reverse_YGR170W

1138

130065

7.9

PSD2 SGDID:S000003402, Chr VII from 837147-840563, Verified ORF, "Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes, converts phosphatidylserine to phosphatidylethanolamine"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.39222.39222.3	2.6933	0.1593	93.9%	2047.8544	2049.147	30	4.039	34.4%	1	S.KNHKGRQLHLLRSGIYE.K	3

Reverse_YKR086W

1071

121652

8.2

PRP16 SGDID:S000001794, Chr XI from 599499-602714, Verified ORF, "RNA helicase in the DEAH-box family involved in the second catalytic step of splicing, exhibits ATP-dependent RNA unwinding activity"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.27686.27686.3	2.5189	0.1231	96.0%	1802.7843	1803.0526	10	4.166	40.0%	1	F.KKANMTASTIILKLDR.R	3

YLR095C

812

93446

5.8

IOC2 SGDID:S000004085, Chr XII from 332116-329678, reverse complement, Verified ORF, "Member of a complex (Isw1b) with Isw1p and Ioc4p that exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing, contains a PHD finger motif"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08195.08195.2	2.2185	0.147	95.3%	1213.8522	1212.6112	326	4.476	50.0%	1	G.TVGPLQTGDVPE.L	2

YLR337C

817

82594

9.9

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08415.08415.3	2.0676	0.1114	91.8%	1217.6643	1215.6373	63	3.873	36.4%	1	K.NPTKSPPPPPSP.S	3

YKL029C

669

74376

8.2

MAE1 SGDID:S000001512, Chr XI from 384368-382359, reverse complement, Verified ORF, "Mitochondrial malic enzyme, catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.09523.09523.2	3.0109	0.0908	95.3%	1342.1122	1339.5992	14	4.474	72.2%	2	R.DFDECLQWVK.A	2

YNR016C

2233

250351

6.3

ACC1 SGDID:S000005299, Chr XIV from 661376-654675, reverse complement, Verified ORF, "Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to form malonyl-CoA; required for de novo biosynthesis of long-chain fatty acids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.08801.08801.2	4.6689	0.4208	100.0%	2060.0122	2059.9702	1	7.613	55.6%	1	R.AVS*VSDLSYVANSQSSPLR.E	2
*	22_g_01_itms.08814.08814.3	4.1877	0.2376	94.8%	2061.4443	2059.9702	10	4.844	36.1%	1	R.AVS*VSDLSYVANSQSSPLR.E	3
*	22_g_01_itms.09529.09529.2	2.9249	0.2984	99.3%	1522.9922	1521.6749	2	5.056	58.3%	2	R.ETESGFEYGLFDK.G	2

YER132C

1753

195382

7.8

PMD1 SGDID:S000000934, Chr V from 430445-425184, reverse complement, Verified ORF, "Protein with an N-terminal kelch-like domain, putative negative regulator of early meiotic gene expression; required, with Mds3p, for growth under alkaline conditions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.21886.21886.2	2.5328	0.2867	96.8%	2546.3523	2547.3586	1	5.605	30.4%	1	N.QISHLGSSASLPNS*PILPVLNIPL.P	2

YJR041C

1174

135117

6.4

URB2 SGDID:S000003802, Chr X from 513677-510153, reverse complement, Verified ORF, "Nucleolar protein required for normal metabolism of the rRNA primary transcript, proposed to be involved in ribosome biogenesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.33513.33513.3	2.6452	0.1655	96.0%	2015.4543	2018.1367	10	4.158	34.4%	1	F.GYKSYLLLFNAIKEFLV.S	3

Reverse_YLR335W

720

77881

7.2

NUP2 SGDID:S000004327, Chr XII from 797430-799592, Verified ORF, "Protein involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.12605.12605.2	1.4222	0.393	94.3%	1142.5322	1141.4679	179	5.389	38.9%	1	N.QS*DAAHKTGF.T	2

Reverse_YMR190C

1447

163837

6.3

SGS1 SGDID:S000004802, Chr XIII from 645257-640914, reverse complement, Verified ORF, "Nucleolar DNA helicase of the RecQ family involved in maintenance of genome integrity, regulates chromosome synapsis and meiotic crossing over; has similarity to human BLM and WRN helicases implicated in Bloom and Werner syndromes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.23583.23583.3	3.2225	0.1678	93.7%	2313.5942	2314.2307	50	4.025	33.3%	1	L.NTRNFSQKLFVPEKLELNH.I	3

Reverse_YMR280C

1433

160485

9.0

CAT8 SGDID:S000004893, Chr XIII from 831328-827027, reverse complement, Verified ORF, "Zinc cluster transcriptional activator necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.20992.20992.2	2.2745	0.0528	91.9%	2107.3123	2110.2751	295	4.371	29.4%	1	L.FKDLREVKVNPAKLLLNI.S	2

YDR080W

992

113412

4.9

VPS41 SGDID:S000002487, Chr IV from 604004-606982, Verified ORF, "Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	22_g_01_itms.34183.34183.2	1.4191	0.0347	95.8%	1321.2522	1322.5712	264	4.569	41.7%	1	A.SEPTASSKEEGSN.I	2

YOR217W