DTASelect v1.9 /wfs/bfd/3/scott/beth/ti4c_2 /wfs/dbase/nci/yeastorf3.fasta SEQUEST v.27 in SQT format. -o true Use criteria 1.8 Minimum +1 XCorr 2.5 Minimum +2 XCorr 3.5 Minimum +3 XCorr 0.08 Minimum DeltCN 1 Minimum charge state 3 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement true Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 10 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN M+H+ CalcM+H+ TotalIntensity SpRank SpScore IonProportion Redundancy Sequence ORFP:YHR197W 30 240 40.8% 763 86667 5.7 U YHR197W SGDID:S0001240, Chr VIII from 493892-496183 * bethti4c-01.2120.2120.2 3.74 0.44 1371.48 1372.567 8121.2 1 1106.8 72.7 25 K.GNEFHTILATLR.S * bethti4c-06.1858.1858.3 6.5387 0.5207 3248.12 3247.61 7216.5 1 1416.9 32.8 3 K.GCHTSVVTCAYNPLVLSTHGGQLLAAIYSR.L * bethti4c-01.1146.1146.2 3.659 0.4747 1456.82 1457.583 6921.5 1 834.3 61.5 11 K.TGFYSSVISSSHGK.Q * bethti4c-05.3526.3526.2 4.8149 0.4401 2019.53 2020.479 8034.0 1 2336.4 73.5 9 K.QLFNTLISSVAIIIDLMK.N * bethti4c-05.3530.3530.3 3.8217 0.2532 2020.38 2020.479 9442.1 2 1377.5 38.2 1 K.QLFNTLISSVAIIIDLMK.N * bethti4c-05.2763.2763.3 4.6927 0.4475 2848.41 2849.47 9985.9 1 1237.6 33.3 1 K.LKAIIPTLITLSQYEPELVLPVLQR.I * bethti4c-04.0582.0582.2 3.2195 0.3655 1298.76 1299.469 8245.8 1 918.8 75.0 9 R.NTTTFKPFTNK.F * bethti4c-01.2330.2330.2 5.5441 0.4996 1821.67 1822.152 8682.8 1 1631.0 68.8 70 R.TVLINLIISDYASLGTK.T * bethti4c-01.2323.2323.2 3.5071 0.349 1619.99 1620.898 9687.7 1 1671.4 75.0 8 R.LVCENFAYLHLLK.I * bethti4c-01.1960.1960.2 3.1371 0.278 1225.03 1225.489 8576.3 1 1580.0 80.0 1 R.TGLMSILSQFK.P * bethti4c-01.2643.2643.2 4.1063 0.3448 1788.99 1790.215 7588.5 1 799.8 56.7 1 R.TGLMSILSQFKPIIQL.C * bethti4c-04.2886.2886.2 3.8859 0.4371 2476.56 2477.928 9502.5 1 1175.5 50.0 1 R.TGLMSILSQFKPIIQLCGEILD.F * bethti4c-04.3196.3196.3 3.9598 0.3076 3352.13 3353.818 9867.9 1 855.0 25.0 1 R.TGLMSILSQFKPIIQLCGEILDFEQDNEL.Y * bethti4c-06.2876.2876.3 6.6614 0.4865 3643.34 3645.168 9508.8 1 2331.1 34.2 10 R.TGLMSILSQFKPIIQLCGEILDFEQDNELYK.L * bethti4c-05.3031.3031.2 3.8358 0.284 2440.09 2438.703 8617.9 1 657.0 44.7 4 K.PIIQLCGEILDFEQDNELYK.L * bethti4c-05.3562.3562.3 3.6781 0.2604 2314.26 2315.863 5313.0 1 926.5 42.5 1 R.LSLLADMLVAFISLPTPFPIR.V * bethti4c-05.3560.3560.2 3.3277 0.2966 2315.33 2315.863 6961.7 1 773.3 47.5 2 R.LSLLADMLVAFISLPTPFPIR.V * bethti4c-06.2452.2452.3 4.4526 0.5131 3091.87 3092.659 6604.8 1 1028.3 32.1 1 F.ISLPTPFPIRVPLGGINSLCEVLLGVSNK.Y * bethti4c-02.2203.2203.2 5.7518 0.5398 1969.29 1970.283 10307.4 1 2442.7 69.4 8 R.VPLGGINSLCEVLLGVSNK.Y * bethti4c-06.3462.3462.2 5.0208 0.5091 2270.35 2271.668 8835.0 1 1955.3 65.8 1 K.CGLSFFEGILSSIELFIPLK.K * bethti4c-06.3193.3193.2 2.7055 0.436 2399.64 2399.842 7944.3 1 359.5 37.5 1 K.CGLSFFEGILSSIELFIPLKK.K * bethti4c-06.3136.3136.2 3.0762 0.2275 1940.03 1941.318 7477.3 1 902.1 56.2 1 L.SFFEGILSSIELFIPLK.K * bethti4c-02.0917.0917.2 3.6027 0.3444 1535.33 1536.682 5502.4 1 888.4 69.2 1 K.SNNEIDFNVVGSLK.F * bethti4c-05.0666.0666.2 2.7504 0.4149 1271.01 1271.563 8439.0 1 1006.1 75.0 1 K.VPVGMVYQLHK.P * bethti4c-01.2386.2386.3 4.747 0.4962 2452.63 2452.831 10062.7 1 2545.3 42.9 5 K.VPVGMVYQLHKPLDLGEDGEVR.D * bethti4c-06.1398.1398.3 6.5742 0.4649 3167.56 3166.62 13293.9 1 2398.5 35.2 7 K.VPVGMVYQLHKPLDLGEDGEVRDDINKK.E * bethti4c-03.0553.0553.2 4.0233 0.4294 2024.21 2024.103 9293.0 1 1242.6 55.6 1 K.EVETNESSSNANTGLETLK.A * bethti4c-05.0776.0776.2 3.3232 0.1747 1950.34 1951.181 10317.3 3 863.2 53.1 2 V.KFVEETTVDNGEELIVK.K * bethti4c-04.0778.0778.2 4.8497 0.4402 1821.58 1823.007 5063.5 1 1644.8 83.3 49 K.FVEETTVDNGEELIVK.K * bethti4c-06.1205.1205.2 4.0066 0.457 1951.02 1951.181 6248.0 1 970.9 65.6 4 K.FVEETTVDNGEELIVKK.A ORFP:YNL182C 15 40 37.5% 555 61773 5.7 U YNL182C SGDID:S0005126, Chr XIV from 295957-297624, reverse complement * bethti4c-02.1210.1210.2 4.3139 0.4157 1425.57 1426.655 5966.8 1 998.1 75.0 2 K.ALINVYNLSGSFK.R * bethti4c-03.0629.0629.2 3.8844 0.4288 1696.04 1696.777 6647.8 1 1127.7 69.2 2 K.CLEVVENDGVQYDR.I * bethti4c-01.2226.2226.3 6.0948 0.4928 2727.07 2728.077 8209.9 1 1662.4 35.4 10 R.IQGVNHNLPDFNLPYLLLGSTESGK.L * bethti4c-01.2208.2208.2 5.1831 0.5678 2727.39 2728.077 5935.7 1 1072.6 50.0 5 R.IQGVNHNLPDFNLPYLLLGSTESGK.L * bethti4c-02.1571.1571.2 4.6054 0.3219 1653.03 1652.971 6871.5 1 1157.2 67.9 3 K.TPVLLATFTTPYSIK.S * bethti4c-02.1840.1840.2 2.7945 0.31 2114.48 2115.322 7831.5 1 1195.5 61.8 1 R.ACYIGTAEGCFSLNLFYK.L * bethti4c-06.1592.1592.3 4.469 0.327 2067.28 2068.425 5784.2 1 746.5 36.8 1 K.LKGNAIVNLLQSAGVNTVQK.G * bethti4c-06.1597.1597.2 5.8343 0.5419 2068.44 2068.425 8784.5 1 1880.3 65.8 1 K.LKGNAIVNLLQSAGVNTVQK.G * bethti4c-02.1573.1573.2 4.2406 0.5073 1825.76 1827.091 10905.1 1 1352.1 55.9 1 K.GNAIVNLLQSAGVNTVQK.G * bethti4c-02.0933.0933.2 3.5297 0.4141 1654.91 1655.935 9749.3 1 1416.2 63.3 1 N.AIVNLLQSAGVNTVQK.G * bethti4c-02.1763.1763.2 5.4323 0.5066 2655.3 2652.918 7017.6 1 1282.6 52.2 5 R.TIQTLTTSQDSVGEVTNLLTNPYR.L * bethti4c-02.0079.0079.3 4.9304 0.4163 4152.73 4152.566 6122.4 1 826.3 26.4 5 K.GHLHDIWYQIGEPEAETDPNLALPLNDFNAYLEQVK.T * bethti4c-01.0118.0118.2 3.5889 0.2998 1246.94 1247.393 6071.0 1 1197.5 85.0 1 K.TQESIFSHIGK.V * bethti4c-02.0274.0274.2 3.7968 0.4255 2249.98 2251.406 7464.7 1 1095.4 52.5 1 K.IDATSSLDSNAAKDEEITELK.T * bethti4c-01.0115.0115.2 3.6875 0.4221 1260.26 1261.42 6048.7 1 1258.6 85.0 1 K.TNIEALTHAYK.E KERATIN03 5 9 15.3% 593 59519 5.2 U no description * bethti4c-02.0791.0791.2 2.6232 0.3939 1707.93 1708.784 7432.9 1 536.7 41.7 1 K.GSLGGGFSSGGFSGGSFSR.G * bethti4c-02.1937.1937.3 5.841 0.376 2370.46 2368.652 10013.1 1 2146.7 41.2 4 K.NQILNLTTDNANILLQIDNAR.L * bethti4c-04.2651.2651.2 2.9761 0.3941 2096.01 2097.385 8955.8 1 907.5 52.9 1 K.ADLEMQIESLTEELAYLK.K * bethti4c-04.1943.1943.2 2.6578 0.2205 1797.12 1798.09 9172.3 1 945.4 56.7 1 R.NVQALEIELQSQLALK.Q * bethti4c-03.0885.0885.2 3.7941 0.337 2083.23 2084.21 9376.0 1 1460.5 62.5 2 R.AETECQNTEYQQLLDIK.I ORFP:YGR214W 2 3 15.1% 252 28024 4.7 U RPS0A SGDID:S0003446, Chr VII from 920570-920659,921115-921783 ORFP:YLR048W 2 3 15.1% 252 27962 4.7 U RPS0B SGDID:S0004038, Chr XII from 242233-242322,242682-243350 bethti4c-06.1285.1285.3 5.0456 0.505 2816.67 2818.167 11140.3 1 1471.1 33.3 2 R.NVQVHQEPYVFNARPDGVHVINVGK.T bethti4c-05.0467.0467.2 2.8401 0.3863 1269.87 1270.434 4742.9 1 642.9 75.0 1 K.FAAHTGATPIAGR.F ORFP:YHR085W 3 30 15.0% 334 37867 9.5 U YHR085W SGDID:S0001127, Chr VIII from 276765-277769 * bethti4c-04.0254.0254.2 3.8125 0.2756 1559.66 1560.666 9232.0 1 1380.4 75.0 3 R.NQHLDQNPHDLTK.R * bethti4c-02.0120.0120.2 5.6368 0.5748 2476.32 2477.688 8661.5 1 1549.5 52.2 3 K.VQDATSSGVNATLLSLATQDIDTR.K * bethti4c-06.1740.1740.2 4.1966 0.3469 1560.22 1560.923 8417.3 1 1703.2 79.2 24 R.KAVFIEQFLPIVR.K ORFP:YGL123W 2 7 12.6% 254 27450 10.4 U RPS2 SGDID:S0003091, Chr VII from 277618-278382 * bethti4c-01.2311.2311.2 3.3261 0.3016 1740.29 1741.081 9622.9 1 1069.8 57.1 6 K.ITTIEEIFLHSLPVK.E * bethti4c-02.0921.0921.2 3.5195 0.4678 1835.06 1836.052 7753.4 1 1566.5 65.6 1 K.LLQLAGVEDVYTQSNGK.T ORFP:YBR031W 2 4 10.2% 362 39092 10.6 U RPL4A SGDID:S0000235, Chr II from 300125-301213 ORFP:YDR012W 2 4 10.2% 362 39062 10.6 U RPL4B SGDID:S0002419, Chr IV from 471849-472937 bethti4c-06.1390.1390.2 4.0573 0.4724 1981.03 1982.29 10309.1 1 1169.4 52.9 1 F.SAPIRPDIVHTVFTSVNK.N bethti4c-02.2363.2363.2 3.767 0.372 1821.25 1821.127 9150.3 1 1395.8 58.3 3 R.YATASAIAATAVASLVLAR.G KERATIN02 3 9 9.2% 622 61987 5.2 U no description * bethti4c-02.0723.0723.2 2.5861 0.3926 2022.57 2024.07 8584.7 1 562.3 39.1 1 Y.SYGGGSGGGFSASSLGGGFGGGSR.G * bethti4c-06.1474.1474.2 4.7163 0.4953 1837.34 1839.056 10368.6 1 1853.6 66.7 1 R.HGVQELEIELQSQLSK.K * bethti4c-02.1228.1228.2 5.1128 0.462 2098.08 2096.308 6928.3 1 1246.2 68.8 7 R.QEIECQNQEYSLLLSIK.M KERATIN13 3 4 4.0% 643 65494 6.6 U no description * bethti4c-01.2695.2695.2 3.1 0.3674 1993.18 1995.202 4262.9 1 411.3 53.3 1 R.THNLEPYFESFINNLR.R * bethti4c-01.2316.2316.3 4.4821 0.3083 1994.16 1995.202 8131.0 1 1308.5 45.0 2 R.THNLEPYFESFINNLR.R * bethti4c-04.0292.0292.2 2.912 0.2129 1202.04 1202.396 5872.4 6 968.3 77.8 1 R.LRSEIDNVKK.Q NRL_1MCOH 1 12 3.7% 428 46852 8.9 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H... * bethti4c-01.2203.2203.2 4.2219 0.4246 1808.4 1809.119 9200.1 1 1586.0 66.7 12 R.VVSVLTVLHQNWLDGK.E Proteins Peptide IDs Copies Unfiltered 5094 9654 24428 Redundant 12 66 358 Nonredundant 10 66 358 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0