DTASelect v1.9 /data/1/aobailey/Antczak/3829_02282005/parc /scratch/yates/yrcdb/yeastorf5.fasta SEQUEST 2.7 in SQT format. true Use criteria 1.8 Minimum +1 XCorr 2.5 Minimum +2 XCorr 3.5 Minimum +3 XCorr 0.08 Minimum DeltCN 1 Minimum charge state 3 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement true Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide false Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 10 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN M+H+ CalcM+H+ TotalIntensity SpRank SpScore IonProportion Redundancy Sequence ORFP:YJL115W 15 53 46.2% 279 31603 4.0 U ASF1 SGDID:S0003651, Chr X from 195986-196825 * PARC_3829_02282005-03.03034.03034.2 5.8309 0.4729 2268.67 2269.476 7663.4 1 2148.9 70.6 12 K.FTDPYEFEITFECLESLK.H * PARC_3829_02282005-03.01430.01430.2 5.2082 0.4528 2332.25 2332.616 6136.1 1 1453.4 61.9 9 R.SLDHDQELDSILVGPVPVGVNK.F * PARC_3829_02282005-03.01432.01432.3 5.2516 0.1924 2332.28 2332.616 5610.0 1 1175.2 40.5 1 R.SLDHDQELDSILVGPVPVGVNK.F * PARC_3829_02282005-03.01440.01440.1 2.2285 0.369 965.77 966.169 3914.9 1 449.8 66.7 1 L.VGPVPVGVNK.F * PARC_3829_02282005-03.01435.01435.1 1.9158 0.2235 866.77 867.036 3270.4 1 329.1 68.8 1 V.GPVPVGVNK.F * PARC_3829_02282005-02.03582.03582.3 4.721 0.4165 3541.73 3541.986 7721.5 1 857.9 26.6 7 K.FVFSADPPSAELIPASELVSVTVILLSCSYDGR.E * PARC_3829_02282005-03.00806.00806.2 4.4772 0.538 1892.71 1892.973 6279.6 1 1091.5 71.4 2 R.VGYYVNNEYDEEELR.E * PARC_3829_02282005-04.00764.00764.2 4.7177 0.4106 2529.25 2529.679 7718.5 1 1334.6 55.0 5 R.VGYYVNNEYDEEELRENPPAK.V * PARC_3829_02282005-05.00847.00847.2 2.7435 0.323 969.09 966.128 4250.6 1 753.4 92.9 2 K.VQVDHIVR.N * PARC_3829_02282005-05.00744.00744.1 2.1073 0.2134 941.14 941.118 3011.8 4 221.1 78.6 1 R.NILAEKPR.V * PARC_3829_02282005-05.00871.00871.2 3.6212 0.3176 1618.93 1618.784 8346.4 1 991.5 64.3 4 R.RKIEGGSTDIESTPK.D * PARC_3829_02282005-05.00879.00879.2 4.0592 0.3837 2031.75 2032.218 7445.7 1 792.4 52.8 1 R.RKIEGGSTDIESTPKDAAR.S * PARC_3829_02282005-05.00875.00875.3 4.4451 0.1912 2032.79 2032.218 8471.4 1 1181.4 41.7 1 R.RKIEGGSTDIESTPKDAAR.S * PARC_3829_02282005-04.00752.00752.2 4.7236 0.4068 1463.21 1462.597 5741.2 1 1745.2 84.6 5 R.KIEGGSTDIESTPK.D * PARC_3829_02282005-04.00756.00756.2 5.2768 0.4771 1876.99 1876.031 8235.1 1 1602.4 64.7 1 R.KIEGGSTDIESTPKDAAR.S ORFP:YLR441C 3 3 20.4% 255 28743 10.0 U RPS1A SGDID:S0004433, Chr XII from 1018903-1018136, reverse complement ORFP:YML063W 3 3 20.4% 255 28812 10.0 U RPS1B SGDID:S0004528, Chr XIII from 146482-147249 PARC_3829_02282005-04.00773.00773.2 3.0883 0.3921 2189.93 2190.384 9499.4 3 466.9 38.9 1 R.VVEVCLADLQGSEDHSFRK.I PARC_3829_02282005-04.01517.01517.2 4.4943 0.5507 1754.93 1754.955 8827.0 1 1867.9 75.0 1 K.NLLTNFHGMDFTTDK.L PARC_3829_02282005-03.01414.01414.2 3.9695 0.4352 1847.97 1848.037 5409.3 1 1073.6 61.8 1 K.FDVGALMALHGEGSGEEK.G gi|7463016|pir||S77957 2 4 11.9% 269 27961 6.7 U lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes * PARC_3829_02282005-05.00731.00731.2 4.5379 0.5239 1921.47 1921.079 9526.5 1 1348.1 58.8 3 R.DQNFAGATAIHHPNVAEK.R * PARC_3829_02282005-03.00851.00851.2 3.2626 0.2622 1430.13 1428.544 5365.3 1 893.0 69.2 1 R.VFTSWTGGGTSATR.L ORFP:YPL153C 4 5 7.6% 821 91962 7.8 U RAD53 SGDID:S0006074, Chr XVI from 264191-261726, reverse complement * PARC_3829_02282005-06.01682.01682.2 4.3235 0.4812 1898.13 1897.135 8128.6 1 1945.4 67.6 1 K.DFSIIDEVVGQGAFATVK.K * PARC_3829_02282005-03.01446.01446.2 3.3734 0.3682 2705.01 2704.968 9163.4 1 618.8 35.4 1 K.MSPLGSQSYGDFSQISLSQSLSQQK.L * PARC_3829_02282005-03.01450.01450.3 3.761 0.3378 2705.09 2704.968 11702.8 1 914.6 27.1 1 K.MSPLGSQSYGDFSQISLSQSLSQQK.L * PARC_3829_02282005-03.00782.00782.2 5.8219 0.4079 2318.93 2319.462 8738.0 1 1923.6 66.7 2 R.KLQMEQQLQEQDQEDQDGK.I NRL_1MCOH 2 2 7.5% 428 46852 8.9 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H... * PARC_3829_02282005-04.02120.02120.2 3.536 0.3835 1809.15 1809.119 9416.0 1 1373.8 63.3 1 R.VVSVLTVLHQNWLDGK.E * PARC_3829_02282005-03.00795.00795.2 3.1167 0.4439 1907.97 1906.161 4840.6 2 278.8 46.7 1 R.EPQVYTLPPSREEMTK.N ORFP:YBR263W 2 6 6.7% 490 53686 8.7 U SHM1 SGDID:S0000467, Chr II from 736219-737691 * PARC_3829_02282005-04.01209.01209.2 2.6559 0.2814 1574.83 1574.774 4877.8 5 347.0 50.0 2 K.HSITLIPSENFTSK.A * PARC_3829_02282005-06.01531.01531.2 3.6794 0.4283 2051.89 2052.356 6774.1 1 815.9 55.6 4 R.LMGLDLPDGGHLSHGYQLK.S Proteins Peptide IDs Copies Unfiltered 3037 2620 5664 Redundant 7 28 73 Nonredundant 6 28 73 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0