DTASelect v2.0.37 /data/1/catclw/Projects/Jamie/Alpha_FT_3_01072010/splitted /garibaldi/people-b/applications/yates/dbase/SGD_S-cerevisiae_na_06-30-2008_reversed.fasta SEQUEST 3.0 in SQT format. --trypstat --fp 0.1 -p 1 -e con true Use criteria 0.0 Minimum peptide confidence 0.1 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 16 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement false Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling con Exclude protein names matching 0 Minimum modified peptides per locus 1 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence YIL149C 184 220 69.6% 1679 195140 6.0 U MLP2 SGDID:S000001411, Chr IX from 68067-63028, reverse complement, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length" * FT_3a_40.16400.16400.2 4.8908 0.6006 100.0 2409.2927 2409.7869 4710.6 1 8.614 55.0 2 K.ISEFLNVPFESLQGVTYPVLR.K * FT_3a_37.15132.15132.2 3.6652 0.5232 100.0 2080.1333 2080.4338 6015.0 1 8.145 47.1 1 E.FLNVPFESLQGVTYPVLR.K * FT_3a_27.11462.11462.2 2.9828 0.3945 100.0 1844.9878 1846.0845 6755.0 1 6.547 56.7 1 R.SEEEVTKLNVLVDEIK.S * FT_3a_35.14555.14555.2 2.7055 0.1349 100.0 2630.7727 2630.911 10291.9 1 4.689 38.1 1 R.SEEEVTKLNVLVDEIKSQYYSR.I * FT_3a_35.14401.14401.3 4.7819 0.4039 100.0 2630.3455 2630.911 8159.1 1 7.094 40.5 2 R.SEEEVTKLNVLVDEIKSQYYSR.I * FT_3a_21.09249.09249.1 1.759 0.2835 100.0 1042.6163 1043.2482 7608.3 1 5.084 75.0 1 K.LNVLVDEIK.S * FT_3a_21.09105.09105.2 2.7496 0.4111 100.0 1042.6136 1043.2482 4483.1 1 7.108 81.2 1 K.LNVLVDEIK.S * FT_3a_40.16202.16202.6 3.3303 0.3183 100.0 4073.1384 4073.5066 6361.9 107 5.802 20.6 1 R.ISKLKQLLDESSEQKNTAKEELNGLKDQLNEERSR.Y * FT_3a_7.04041.04041.1 1.4535 0.3089 100.0 1176.5753 1177.253 1614.2 1 7.251 55.6 1 K.QLLDESSEQK.N * FT_3a_13.06435.06435.2 2.3464 0.3306 100.0 1687.8147 1687.8033 6308.7 1 5.465 57.7 1 K.EELNGLKDQLNEER.S * FT_3a_6.03704.03704.1 1.6403 0.1183 97.8 903.418 903.9237 3291.0 1 3.841 75.0 1 K.DQLNEER.S * FT_3a_10.05308.05308.1 1.9432 0.0817 97.2 817.1472 816.9726 2828.2 2 4.56 75.0 1 R.EIDALKK.Q * FT_3a_16.07333.07333.3 3.0748 0.3683 100.0 2324.0955 2324.5115 6011.5 1 4.757 33.8 1 R.EVNDEKRVKEEYDIWQSR.D * FT_3a_16.07307.07307.2 3.7155 0.4427 100.0 1453.7166 1453.5939 6005.7 1 7.942 85.0 2 R.VKEEYDIWQSR.D * FT_3a_15.07091.07091.3 2.8982 0.1327 93.3 1452.7118 1453.5939 5825.3 11 4.664 42.5 1 R.VKEEYDIWQSR.D * FT_3a_18.08071.08071.1 1.5099 0.2478 98.9 1225.5516 1226.2872 3576.4 5 4.648 50.0 1 K.EEYDIWQSR.D * FT_3a_7.04221.04221.1 2.4104 0.3457 100.0 1447.6304 1448.4424 5315.5 2 6.388 54.2 1 R.DQGNDSLNDDLNK.E * FT_3a_7.04208.04208.2 3.4467 0.4395 100.0 1447.6317 1448.4424 5983.0 1 7.438 75.0 1 R.DQGNDSLNDDLNK.E * FT_3a_7.04013.04013.2 4.8973 0.4591 100.0 1819.8113 1819.8358 4918.1 1 7.955 80.0 1 R.DQGNDSLNDDLNKENK.L * FT_3a_22.09464.09464.2 3.2865 0.3738 100.0 1405.7433 1405.7131 6786.2 1 8.19 85.0 1 R.KLMEMENILQR.C * FT_3a_13.06475.06475.1 1.86 0.3738 100.0 973.56885 974.14484 6372.0 2 5.734 62.5 1 K.SNAISLQLK.Y * FT_3a_13.06376.06376.2 2.7821 0.3572 100.0 975.5769 974.14484 5536.8 1 5.966 87.5 1 K.SNAISLQLK.Y * FT_3a_6.03739.03739.1 2.6733 0.2932 100.0 971.4603 970.0234 3194.9 1 6.382 78.6 2 K.YDTSVQEK.E * FT_3a_13.06249.06249.2 2.4254 0.2686 100.0 1798.8226 1800.0333 5865.9 1 5.92 53.6 1 K.YDTSVQEKELMLQSK.K * FT_3a_12.05777.05777.2 1.4421 0.0354 92.5 1409.6589 1409.6654 4869.1 14 3.167 50.0 1 K.KLIEEKLSSFSK.K * FT_3a_7.03990.03990.2 1.6775 0.1032 97.8 922.49927 921.035 2520.9 2 4.401 78.6 1 K.TLTEEVTK.S * FT_3a_6.03754.03754.1 2.4147 0.0887 97.7 1173.5671 1172.2365 5522.8 1 4.785 55.6 2 K.SSHVENLEEK.L * FT_3a_25.10746.10746.2 3.0769 0.5075 100.0 2015.9276 2016.2318 5838.3 1 7.541 53.3 1 K.LYQMQSNYESVFTYNK.F * FT_3a_4.02992.02992.1 1.3971 0.3174 100.0 749.3678 749.7955 5033.1 1 5.8 66.7 1 K.DTASVEK.A * FT_3a_12.05872.05872.1 1.5925 0.0729 96.8 877.4491 876.0179 1846.0 1 3.182 66.7 1 K.NMNDLLR.S * FT_3a_12.05924.05924.2 1.8673 0.2808 100.0 875.43976 876.0179 3795.5 1 5.386 91.7 1 K.NMNDLLR.S * FT_3a_8.04288.04288.1 1.6802 0.1908 99.1 905.495 906.0233 4348.6 1 5.678 78.6 1 R.SQLTSLEK.D * FT_3a_7.04276.04276.2 1.5572 0.1644 98.1 905.4952 906.0233 3799.7 13 4.5 64.3 1 R.SQLTSLEK.D * FT_3a_12.05895.05895.2 3.2898 0.5461 100.0 1536.7698 1537.6758 7174.9 1 9.044 79.2 2 R.SQLTSLEKDCSLR.A * FT_3a_24.10231.10231.3 4.8725 0.3975 100.0 2600.1558 2601.6655 8932.2 1 6.44 35.7 1 K.NDDNSCRNPEHTDVIDELIDTK.L * FT_3a_25.10863.10863.2 4.8633 0.5483 100.0 1740.8586 1739.8761 7391.8 1 9.468 75.0 1 R.NPEHTDVIDELIDTK.L * FT_3a_25.10926.10926.3 3.3449 0.3768 100.0 1739.8533 1739.8761 7323.9 1 5.983 41.1 1 R.NPEHTDVIDELIDTK.L * FT_3a_22.09514.09514.2 3.6867 0.5338 100.0 2941.4133 2942.2888 10373.7 1 9.104 34.6 1 R.LQNIVMDCTKEEEATMTTSAVSPTVGK.L * FT_3a_9.04672.04672.2 4.2172 0.6788 100.0 1737.8228 1738.9038 7311.2 1 11.489 75.0 1 K.EEEATMTTSAVSPTVGK.L * FT_3a_9.04990.04990.1 1.5419 0.1541 98.4 722.40906 722.859 4946.0 2 3.58 80.0 2 K.LFSDIK.V * FT_3a_20.08736.08736.1 1.9926 0.2585 100.0 935.5273 935.1076 5342.1 1 5.645 78.6 1 K.TPELISFK.E * FT_3a_20.08812.08812.2 2.4347 0.2196 100.0 937.5371 935.1076 5387.5 1 5.219 92.9 2 K.TPELISFK.E * FT_3a_6.03849.03849.2 2.2662 0.1817 100.0 856.4584 855.9659 4888.2 1 4.299 91.7 1 K.SLEHELK.R * FT_3a_6.03796.03796.1 1.7745 0.3411 100.0 1011.55927 1012.1533 4941.0 1 5.887 64.3 1 K.SLEHELKR.S * FT_3a_7.04010.04010.2 1.8114 0.2291 99.6 1013.5747 1012.1533 4774.2 8 4.589 71.4 1 K.SLEHELKR.S * FT_3a_22.09506.09506.1 1.8097 0.0537 96.3 1322.7351 1321.5103 6411.0 10 3.515 50.0 1 R.STELLETVSLTK.R * FT_3a_22.09556.09556.2 4.4422 0.547 100.0 1322.7332 1321.5103 8771.0 1 9.519 86.4 1 R.STELLETVSLTK.R * FT_3a_37.15280.15280.2 4.5829 0.3291 100.0 2729.517 2727.1272 6290.1 1 6.125 45.8 2 K.LLLLNTSAIQETASPLSQDELISLR.K * FT_3a_33.13770.13770.2 3.2342 0.3613 100.0 2855.6099 2855.3013 8180.6 1 6.346 24.0 1 K.LLLLNTSAIQETASPLSQDELISLRK.I * FT_3a_33.13747.13747.3 3.6295 0.1785 97.4 2856.6128 2855.3013 8059.4 19 5.438 22.0 2 K.LLLLNTSAIQETASPLSQDELISLRK.I * FT_3a_27.11350.11350.2 3.4549 0.41 100.0 2159.124 2160.3855 5907.7 1 7.377 44.7 1 N.TSAIQETASPLSQDELISLR.K * FT_3a_18.08125.08125.2 5.8173 0.5796 100.0 2374.239 2374.6099 8569.0 1 11.145 62.5 1 R.KILESSNIVNENDSQAIITER.L * FT_3a_20.08743.08743.2 5.3702 0.5714 100.0 2246.1377 2246.4358 7879.3 1 11.301 68.4 2 K.ILESSNIVNENDSQAIITER.L * FT_3a_19.08678.08678.2 2.6797 0.2878 100.0 1549.726 1549.7203 6555.0 1 5.083 66.7 1 R.LVEFSNVNELQEK.N * FT_3a_20.08920.08920.1 1.9213 0.1848 99.0 1130.6007 1131.283 2983.3 2 5.137 62.5 1 K.NVELLNCIR.I * FT_3a_20.08919.08919.2 2.0169 0.1592 98.9 1131.6033 1131.283 6001.8 7 4.433 62.5 1 K.NVELLNCIR.I * FT_3a_10.05374.05374.2 2.2371 0.3161 100.0 1392.7375 1393.5792 6045.4 1 5.661 59.1 2 R.ILADKLENYEGK.Q * FT_3a_6.03763.03763.1 2.1645 0.0621 97.2 853.41486 852.9189 5846.5 2 4.946 75.0 1 K.LENYEGK.Q * FT_3a_22.09779.09779.1 3.092 0.1005 98.3 1344.7313 1343.5194 6382.2 1 4.732 68.2 2 K.DAIIELENINAK.M * FT_3a_22.09702.09702.2 2.2588 0.1473 99.3 1343.7327 1343.5194 5352.4 1 5.153 63.6 1 K.DAIIELENINAK.M * FT_3a_26.11149.11149.2 3.8761 0.4858 100.0 1860.9618 1861.12 6968.2 1 7.473 50.0 1 K.DAIIELENINAKMETR.I * FT_3a_13.06124.06124.2 2.1781 0.2198 100.0 1026.6421 1027.2548 5323.6 7 4.829 78.6 1 R.INILLRER.D * FT_3a_16.07450.07450.3 4.0656 0.2757 100.0 2831.362 2832.068 7114.1 1 5.547 25.0 1 R.DSYKLLASTEENKANTNSVTSMEAAR.E * FT_3a_10.05214.05214.2 3.5497 0.5034 100.0 2338.137 2338.5513 6039.3 1 7.397 35.7 1 K.LLASTEENKANTNSVTSMEAAR.E * FT_3a_10.05275.05275.3 3.6308 0.3247 100.0 2338.142 2338.5513 4487.8 1 5.921 34.5 1 K.LLASTEENKANTNSVTSMEAAR.E * FT_3a_7.04113.04113.1 2.2053 0.3992 100.0 1351.6274 1352.4614 2842.4 2 6.662 41.7 2 K.ANTNSVTSMEAAR.E * FT_3a_10.05175.05175.2 3.2847 0.5465 100.0 1377.7404 1376.5493 5545.3 1 8.268 81.8 1 K.IRELEAELSSTK.V * FT_3a_8.04442.04442.1 2.8566 0.3126 100.0 1107.5632 1107.2024 2539.0 1 7.557 72.2 1 R.ELEAELSSTK.V * FT_3a_8.04456.04456.2 1.8448 0.1896 99.0 1105.6621 1107.2024 4621.7 1 5.171 72.2 1 R.ELEAELSSTK.V * FT_3a_14.06487.06487.1 1.8177 0.4053 100.0 1256.6968 1257.4319 4455.5 1 5.819 50.0 1 K.VENSAIIQNLR.K * FT_3a_13.06293.06293.1 2.0606 0.1917 98.8 779.47504 778.9665 3526.6 1 5.268 80.0 1 K.ELLIYK.K * FT_3a_19.08688.08688.2 3.4538 0.4606 100.0 1373.708 1372.517 5756.0 1 7.858 80.0 1 K.KTTLEDFENFK.G * FT_3a_22.09798.09798.1 2.1841 0.4407 100.0 1243.5876 1244.3429 5125.4 1 6.957 66.7 2 K.TTLEDFENFK.G * FT_3a_23.09853.09853.2 3.1957 0.2952 100.0 1246.5945 1244.3429 6071.5 1 6.037 88.9 1 K.TTLEDFENFK.G * FT_3a_17.07638.07638.2 2.9916 0.421 100.0 1200.6204 1199.4071 7385.0 1 6.773 83.3 1 R.MLEEAIDHLK.A * FT_3a_20.09012.09012.1 1.6612 0.2295 98.9 1344.7009 1345.5402 7126.2 1 5.459 50.0 1 K.SWVPSYIHVEK.E * FT_3a_21.09127.09127.2 1.3161 0.0499 92.1 1344.6959 1345.5402 7631.9 1 3.337 65.0 1 K.SWVPSYIHVEK.E * FT_3a_20.09020.09020.2 2.6938 0.4331 100.0 974.5755 973.11615 5534.4 1 6.667 78.6 1 V.PSYIHVEK.E * FT_3a_6.03693.03693.1 1.86 0.1714 99.1 978.4867 979.03424 2981.9 1 4.604 62.5 1 R.ASTELSQSR.I * FT_3a_8.04370.04370.2 2.5288 0.2996 100.0 1122.6228 1122.3062 4626.6 1 5.521 72.2 1 K.KETASFIPTK.E * FT_3a_9.04664.04664.2 1.5511 0.0476 93.6 1281.638 1282.3062 5888.1 2 3.802 66.7 1 K.KETAS*FIPT*K.E * FT_3a_10.05118.05118.1 1.504 0.1252 97.3 993.5255 994.1321 3561.0 3 4.213 56.2 2 K.ETASFIPTK.E * FT_3a_15.07150.07150.2 1.4884 0.0119 92.4 1579.8381 1580.7777 5676.7 102 2.589 30.8 1 K.ETASFIPTKESLTR.D * FT_3a_7.04173.04173.1 2.7445 0.3116 100.0 1258.685 1258.4166 3970.4 1 5.898 72.2 1 K.IKELENNLER.L * FT_3a_7.04024.04024.1 1.5143 0.224 99.0 1016.5023 1017.0831 2063.6 4 4.716 64.3 1 K.ELENNLER.L * FT_3a_6.03685.03685.1 1.8256 0.2874 100.0 946.5339 947.07886 2352.8 1 5.551 64.3 1 R.LRSDLQSK.I * FT_3a_25.10827.10827.2 2.2551 0.177 99.6 1645.8815 1646.8376 6394.6 1 4.393 53.8 1 R.SDLQSKIQEIESIR.S * FT_3a_9.04729.04729.1 1.9192 0.2509 100.0 989.55566 988.12836 4709.3 7 4.177 64.3 2 K.IQEIESIR.S * FT_3a_9.04674.04674.2 1.4145 0.0057 92.4 989.49615 988.12836 3277.2 111 3.08 50.0 1 K.IQEIESIR.S * FT_3a_11.05498.05498.1 2.2325 0.3941 100.0 1451.6475 1452.5781 5676.2 1 5.773 59.1 2 K.WAQNTIDDTEMK.M * FT_3a_11.05452.05452.2 1.9971 0.1001 98.4 1451.6486 1452.5781 4822.4 12 3.618 54.5 1 K.WAQNTIDDTEMK.M * FT_3a_20.09088.09088.1 1.527 0.2264 99.0 1004.56256 1005.1559 5832.8 2 5.041 56.2 1 K.SLLTELSNK.E * FT_3a_21.09341.09341.2 2.0612 0.1618 99.3 1005.56586 1005.1559 4092.6 3 4.932 75.0 1 K.SLLTELSNK.E * FT_3a_23.09967.09967.2 3.4291 0.399 100.0 1706.9261 1706.9305 6230.8 1 5.995 53.6 1 K.SLLTELSNKETTIEK.L * FT_3a_10.05293.05293.1 1.7948 0.2474 100.0 1147.5835 1148.2549 4963.1 3 5.206 61.1 2 K.LSSEIENLDK.E * FT_3a_22.09800.09800.3 4.6223 0.411 100.0 2502.2737 2502.7856 7732.4 1 7.24 33.8 1 K.FQYKFLDQNSDASTLEPTLRK.E * FT_3a_18.08173.08173.2 4.7799 0.5503 100.0 1935.9928 1936.1284 7766.7 1 9.503 78.1 1 Y.KFLDQNSDASTLEPTLR.K * FT_3a_19.08722.08722.2 3.456 0.4081 100.0 1806.8877 1807.9543 6292.1 1 7.054 56.7 3 K.FLDQNSDASTLEPTLR.K * FT_3a_16.07350.07350.2 2.549 0.3365 100.0 1935.9889 1936.1284 7641.2 2 5.337 40.6 1 K.FLDQNSDASTLEPTLRK.E * FT_3a_13.06144.06144.2 4.099 0.3618 100.0 1355.7897 1356.6049 5620.1 1 6.887 80.0 1 R.KELEQIQVQLK.D * FT_3a_17.07813.07813.1 2.7944 0.2209 100.0 1227.6964 1228.4308 4311.0 1 5.408 77.8 1 K.ELEQIQVQLK.D * FT_3a_18.07993.07993.2 2.6255 0.2525 100.0 1227.6946 1228.4308 5511.8 1 6.325 77.8 1 K.ELEQIQVQLK.D * FT_3a_10.05028.05028.1 1.204 0.0511 92.4 1613.55 1614.8412 6741.9 2 4.292 34.6 1 K.LKEGALHFVQQSEK.L * FT_3a_10.05014.05014.2 4.1455 0.5298 100.0 1613.8666 1614.8412 6218.2 1 9.091 80.8 1 K.LKEGALHFVQQSEK.L * FT_3a_9.04654.04654.2 2.4605 0.3435 100.0 1373.6891 1373.5077 3026.7 2 6.052 54.5 2 K.EGALHFVQQSEK.L * FT_3a_6.03650.03650.1 1.7747 0.2287 100.0 915.50244 916.0244 2922.5 1 5.629 75.0 1 K.LRNEVER.I * FT_3a_6.03842.03842.1 1.3104 0.0651 94.8 890.5038 891.1132 4806.6 7 3.085 58.3 1 K.MIEKIEK.M * FT_3a_6.03838.03838.2 2.2137 0.131 100.0 891.5058 891.1132 4468.4 12 4.194 91.7 1 K.MIEKIEK.M * FT_3a_13.06336.06336.1 2.0606 0.4249 100.0 1079.5613 1080.2936 5722.0 2 7.075 56.2 1 K.MSTIVQLCK.K * FT_3a_20.08813.08813.2 2.1453 0.2642 96.9 1444.7899 1443.7264 6366.4 10 4.971 40.9 1 N.KDLSELVIRLEK.D * FT_3a_7.03915.03915.1 2.9775 0.4441 100.0 1222.546 1222.2599 4016.1 1 7.022 60.0 1 K.DAADCQAELTK.T * FT_3a_20.09026.09026.1 2.7827 0.4533 100.0 1339.6764 1340.4723 6419.7 1 8.212 68.2 1 K.SSLYSAQDLLDK.H * FT_3a_15.07192.07192.2 3.5376 0.5349 100.0 1761.8833 1762.9164 6510.6 1 8.582 60.7 1 K.SSLYSAQDLLDKHER.K * FT_3a_20.08943.08943.1 2.8828 0.3185 100.0 1532.7999 1532.6904 2700.3 1 6.325 58.3 1 R.ELISNIEQTESLR.V * FT_3a_20.08897.08897.2 2.8861 0.511 100.0 1531.7975 1532.6904 6040.3 1 7.486 62.5 1 R.ELISNIEQTESLR.V * FT_3a_8.04452.04452.2 3.3081 0.4438 100.0 1031.5824 1031.1937 4267.2 1 7.786 93.8 1 R.VENSVLIEK.V * FT_3a_28.11766.11766.1 1.6036 0.0917 97.4 1048.6174 1049.2578 3562.3 1 3.282 62.5 1 K.LVSLFSNLR.H * FT_3a_28.11700.11700.2 2.4551 0.3737 100.0 1048.6154 1049.2578 4063.5 1 6.915 93.8 1 K.LVSLFSNLR.H * FT_3a_7.03935.03935.2 3.2025 0.486 100.0 1450.7704 1451.6288 5512.6 1 8.551 77.3 1 R.NSLETKLTTCKR.E * FT_3a_11.05552.05552.1 2.1178 0.2915 100.0 707.4175 706.8596 3094.3 1 6.232 80.0 2 R.ELAFVK.Q * FT_3a_24.10256.10256.2 1.4645 0.0323 92.5 1624.4995 1626.6769 6085.3 4 2.853 41.7 1 K.NDS*LEKTINDLQR.T * FT_3a_6.03628.03628.1 1.5722 0.1936 99.1 806.42664 806.89075 4077.4 1 4.905 66.7 1 R.TQTLSEK.E * FT_3a_24.10439.10439.2 5.2077 0.4712 100.0 1603.761 1602.7468 8961.0 1 8.586 83.3 1 K.EYQCSAVIIDEFK.D * FT_3a_30.12486.12486.2 4.5302 0.5256 100.0 2060.0127 2060.274 7949.8 1 8.684 62.5 1 K.EYQCSAVIIDEFKDITK.E * FT_3a_12.05850.05850.1 1.9721 0.0604 97.4 1045.6158 1044.2358 5297.9 18 3.498 56.2 1 K.EVTQVNILK.E * FT_3a_12.05903.05903.2 2.4551 0.2941 100.0 1045.6157 1044.2358 3391.7 1 6.138 75.0 1 K.EVTQVNILK.E * FT_3a_11.05528.05528.1 1.6341 0.113 97.8 718.39966 717.84 2979.7 7 3.656 80.0 1 R.DLIQTK.E * FT_3a_6.03782.03782.1 2.5228 0.2316 100.0 1020.52435 1019.09906 3040.1 1 4.872 62.5 2 K.EQVSINSNK.I * FT_3a_21.09219.09219.3 3.999 0.3492 100.0 2813.3655 2814.1055 6363.7 1 6.078 35.2 1 K.EQVSINSNKILVYESEMEQCKQR.Y * FT_3a_15.06987.06987.2 3.9985 0.5394 100.0 1528.7039 1529.7108 7809.2 1 10.73 81.8 3 K.ILVYESEMEQCK.Q * FT_3a_11.05658.05658.2 3.7792 0.5347 100.0 1813.8612 1814.029 6717.2 1 9.323 61.5 1 K.ILVYESEMEQCKQR.Y * FT_3a_6.03761.03761.1 2.3589 0.4041 100.0 1137.5553 1138.2218 5705.2 2 6.832 68.8 1 R.YQDLSQQQK.D * FT_3a_43.17455.17455.6 3.8923 0.18 96.9 5267.687 5268.7603 9494.4 1 4.502 17.1 1 R.YQDLSQQQKDAQKKDIEKLTNEISDLKGKLSSAENANADLENKFNR.L * FT_3a_10.05305.05305.2 2.6091 0.2024 100.0 1033.6017 1033.1663 2003.3 5 5.27 68.8 1 K.LTNEISDLK.G * FT_3a_7.03957.03957.1 2.9941 0.5097 100.0 1475.699 1476.5396 5297.4 1 8.939 65.4 2 K.LSSAENANADLENK.F * FT_3a_7.03946.03946.2 4.7043 0.4522 100.0 1475.6992 1476.5396 8695.7 1 9.612 76.9 1 K.LSSAENANADLENK.F * FT_3a_10.05151.05151.2 4.3172 0.59 100.0 1893.9156 1894.0074 5245.5 1 9.539 62.5 1 K.LSSAENANADLENKFNR.L * FT_3a_5.03399.03399.2 1.708 0.3294 100.0 1384.7792 1383.5901 7164.2 25 4.53 50.0 1 K.KQAHEKLDASKK.Q * FT_3a_5.03386.03386.3 3.1987 0.3887 100.0 1382.7761 1383.5901 4576.4 1 5.661 52.3 1 K.KQAHEKLDASKK.Q * FT_3a_17.07844.07844.2 4.1211 0.4581 100.0 1600.8733 1600.8119 6081.9 1 7.753 69.2 1 K.KQQAALTNELNELK.A * FT_3a_20.08922.08922.2 2.7167 0.2458 100.0 1475.0371 1472.6378 5108.3 1 5.408 58.3 1 K.QQAALTNELNELK.A FT_3a_8.04397.04397.2 2.0021 0.018 97.8 960.49976 961.0593 4084.9 2 4.27 85.7 1 L.TNELNELK.A * FT_3a_12.05823.05823.2 4.2623 0.5248 100.0 1586.7867 1587.7289 5359.5 1 8.641 70.8 2 K.DKLEQDLHFENAK.V * FT_3a_12.05991.05991.3 2.9894 0.2348 96.3 1586.7814 1587.7289 6900.8 1 4.796 56.2 1 K.DKLEQDLHFENAK.V * FT_3a_9.04829.04829.1 1.295 0.1267 97.4 1344.601 1344.4662 5380.0 6 3.715 45.0 1 K.LEQDLHFENAK.V * FT_3a_11.05404.05404.1 1.0978 0.2209 98.4 803.4516 803.9305 2933.7 1 4.475 66.7 1 K.VIDLDTK.L * FT_3a_8.04377.04377.2 2.3536 0.3073 100.0 805.4583 803.9305 2363.6 2 5.9 75.0 1 K.VIDLDTK.L * FT_3a_6.03762.03762.1 3.0248 0.4276 100.0 1270.6042 1271.3287 4898.9 1 8.746 70.0 1 K.AHELQSEDVSR.D * FT_3a_6.03759.03759.2 3.7314 0.5229 100.0 1271.6052 1271.3287 5653.8 1 8.662 85.0 1 K.AHELQSEDVSR.D * FT_3a_16.07581.07581.1 2.0182 0.0975 97.7 777.4515 777.9384 3866.1 3 4.431 80.0 1 K.ELQIFK.T * FT_3a_6.03584.03584.1 2.0499 0.2315 100.0 782.41437 781.8834 5117.9 2 4.4 80.0 1 R.TKEFEK.K * FT_3a_6.03634.03634.1 1.9681 0.3349 100.0 1088.4762 1089.1003 5477.8 1 6.571 61.1 1 K.STSSEAEYSK.D * FT_3a_8.04333.04333.1 1.4016 0.0358 93.7 718.36224 718.82477 4332.6 11 2.73 70.0 1 K.DIETLK.K * FT_3a_7.04046.04046.1 1.7278 0.2938 100.0 1056.4766 1055.0857 1860.4 2 4.217 64.3 2 K.EYEDETLR.R * FT_3a_6.03654.03654.2 1.8532 0.1893 98.6 1357.782 1358.5803 4835.5 1 3.75 55.0 1 R.IKEAEENLKKR.I * FT_3a_7.04178.04178.2 2.0782 0.1066 99.0 1000.56287 1000.14233 4188.7 3 5.052 64.3 1 R.IRLPSEER.I * FT_3a_21.09150.09150.4 2.5778 0.1544 91.7 1810.0928 1811.1777 3780.2 3 3.953 35.7 1 R.IRLPSEERIQKIISK.R * FT_3a_8.04530.04530.2 2.139 0.4515 100.0 1365.6729 1365.4851 7333.2 1 6.586 66.7 1 K.RKEELEEEFR.K * FT_3a_8.04387.04387.3 2.425 0.3233 100.0 1364.6819 1365.4851 6267.2 23 5.729 38.9 1 K.RKEELEEEFR.K * FT_3a_7.04124.04124.2 1.802 0.182 98.6 1336.6732 1337.4717 5544.7 1 4.254 66.7 1 R.KEELEEEFRK.K * FT_3a_11.05716.05716.1 1.687 0.3302 100.0 1081.4883 1081.1235 2280.3 1 5.578 64.3 1 K.EELEEEFR.K * FT_3a_19.08356.08356.1 2.8254 0.3567 100.0 1309.6494 1309.418 3731.7 1 5.835 59.1 1 K.ENAGSLTFLDNK.G * FT_3a_15.06921.06921.2 5.154 0.5177 100.0 1734.7487 1735.7577 9690.7 1 9.44 76.7 1 K.GSGEDAEEELWNSPSK.G * FT_3a_12.05761.05761.2 3.64 0.1164 100.0 1677.8667 1675.8412 8121.2 1 5.658 60.0 3 K.GNSERPSAVAGFINQK.N * FT_3a_6.03843.03843.1 2.1291 0.0909 97.8 1098.0587 1098.2871 4497.0 6 4.086 62.5 1 K.NLKPQEQLK.N * FT_3a_12.05916.05916.2 2.3083 0.3199 100.0 1686.7318 1686.7902 3251.0 4 5.668 42.9 1 K.NDVSFNDSQSMVTNK.E * FT_3a_6.03891.03891.1 3.0424 0.5631 100.0 1318.6256 1319.3702 3040.8 1 8.514 66.7 1 K.ENNIVDSSAAGNK.A * FT_3a_23.09941.09941.1 1.6503 0.0469 95.2 969.53235 968.14 2850.5 3 4.37 56.2 2 K.AIPTFSFGK.P * FT_3a_23.09881.09881.2 1.2816 0.0164 90.8 970.5384 968.14 2198.6 80 3.229 50.0 1 K.AIPTFSFGK.P * FT_3a_33.13864.13864.2 2.824 0.4003 100.0 1647.8265 1647.87 6294.8 1 7.061 53.6 1 K.AIPTFSFGKPFFSSN.T * FT_3a_41.16466.16466.3 2.8167 0.3762 100.0 4351.1953 4353.7935 10844.7 2 5.94 16.7 1 K.AIPTFSFGKPFFSSNTSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_40.16391.16391.4 3.1473 0.1541 91.3 4353.1533 4353.7935 8610.0 1 4.617 17.1 1 K.AIPTFSFGKPFFSSNTSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_29.12323.12323.3 5.9266 0.519 100.0 3589.7954 3589.9023 10506.8 1 8.784 25.8 1 F.GKPFFSSNTSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_34.14118.14118.2 2.7708 0.3306 100.0 1935.8976 1936.0869 5246.6 1 5.968 53.1 1 K.PFFSSNTSSLQSFQNPF.T * FT_3a_32.13349.13349.2 3.6196 0.4725 100.0 3404.6501 3404.6763 7319.0 1 8.831 26.7 1 K.PFFSSNTSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_27.11358.11358.2 3.8267 0.4571 100.0 2839.3877 2839.05 8193.4 1 8.289 38.0 1 S.NTSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_27.11386.11386.2 4.894 0.5237 100.0 2726.352 2724.9463 7065.5 1 9.049 50.0 2 N.TSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_27.11364.11364.3 4.3615 0.3213 100.0 2725.3496 2724.9463 6470.1 1 6.251 29.2 1 N.TSSLQSFQNPFTASQSNINTNAPLR.T * FT_3a_14.06679.06679.1 1.7135 0.3841 100.0 1211.7007 1212.4314 7482.2 1 6.161 55.0 2 R.TLNIQPEVAVK.A * FT_3a_14.06690.06690.2 3.5235 0.3482 100.0 1213.7048 1212.4314 6374.0 3 6.189 80.0 1 R.TLNIQPEVAVK.A * FT_3a_23.10075.10075.2 2.8846 0.4191 100.0 2053.9941 2054.1772 8005.5 1 6.67 36.8 2 K.AAINFSNVTDLTNNSTDGAK.I * FT_3a_22.09662.09662.2 2.5394 0.2808 100.0 1982.9548 1983.0985 5119.2 1 5.991 38.9 1 A.AINFSNVTDLTNNSTDGAK.I * FT_3a_12.05808.05808.2 1.8038 0.1055 98.1 937.4585 936.04956 3950.9 1 3.912 68.8 2 K.ITEIGSTSK.R * FT_3a_6.03677.03677.1 1.6737 0.2895 100.0 1489.7135 1490.5664 3960.5 2 6.22 42.3 1 K.RPIESGTSSDPDTK.K YIL002W-A 8 11 65.2% 69 7729 4.7 U YIL002W-A SGDID:S000028835, Chr IX from 350298-350507, Uncharacterized ORF, "Identified by expression profiling and mass spectrometry" * FT_3a_6.03751.03751.2 4.961 0.5283 100.0 1447.704 1448.529 6060.6 1 9.262 84.6 1 M.TRDTPEDVSTAGAK.D * FT_3a_6.03817.03817.1 2.4257 0.4317 100.0 1192.5625 1191.2366 4231.9 1 6.234 54.5 3 R.DTPEDVSTAGAK.D * FT_3a_45.17994.17994.1 2.3829 0.2687 100.0 1155.7012 1156.4076 7031.2 1 6.317 66.7 2 K.DILDVLNLLK.G * FT_3a_45.18214.18214.2 1.6604 0.097 97.3 1155.6991 1156.4076 4354.0 5 4.454 61.1 1 K.DILDVLNLLK.G * FT_3a_9.04915.04915.1 1.5086 0.1566 97.7 817.07 817.95734 3815.4 8 3.857 66.7 1 K.ISEVELK.L * FT_3a_28.11997.11997.3 4.512 0.2828 100.0 1698.9122 1697.9897 6850.3 1 7.113 51.9 1 K.KMDSLLVQLEDLHR.D * FT_3a_30.12422.12422.2 1.8035 0.1421 98.1 1570.8013 1569.8157 6815.7 7 3.455 41.7 1 K.MDSLLVQLEDLHR.D * FT_3a_30.12457.12457.3 2.2867 0.2183 97.6 1568.8097 1569.8157 4078.4 2 5.128 39.6 1 K.MDSLLVQLEDLHR.D YDL229W 19 19 42.4% 613 66602 5.4 U SSB1 SGDID:S000002388, Chr IV from 44066-45907, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; interacts with the phosphatase subunit Reg1p" * FT_3a_23.10172.10172.2 2.426 0.3111 100.0 1479.7489 1480.6599 7581.0 1 6.044 62.5 1 R.VTPSFVAFTPEER.L FT_3a_6.03755.03755.2 2.0255 0.1526 99.3 883.4749 883.9823 5294.5 1 5.245 85.7 1 K.NQAALNPR.N FT_3a_30.12613.12613.2 5.7419 0.6367 100.0 2161.1145 2161.413 6498.4 1 11.526 72.2 1 K.VIDVDGNPVIEVQYLEETK.T FT_3a_21.09448.09448.2 2.5544 0.4317 100.0 1186.6636 1186.3531 5814.4 1 5.837 72.7 1 K.DAGAISGLNVLR.I FT_3a_25.10784.10784.3 4.4156 0.4378 100.0 2418.1362 2419.5688 7905.9 1 7.405 36.9 1 K.STSGNTHLGGQDFDTNLLEHFK.A FT_3a_9.04718.04718.1 1.6018 0.2319 98.9 1062.507 1063.1089 3900.4 1 4.549 55.6 1 K.TGLDISDDAR.A FT_3a_40.16362.16362.2 1.5774 0.3695 100.0 2963.018 2965.1506 6335.8 2 6.091 19.2 1 R.TLSSVTQTTVEVDSLFDGEDFESSLTR.A FT_3a_24.10295.10295.2 3.1797 0.2143 100.0 1395.7512 1395.6006 7143.2 1 7.153 68.2 1 R.ARFEDLNAALFK.S FT_3a_25.10861.10861.1 1.9723 0.4041 100.0 1167.6068 1168.3342 10262.7 1 6.238 66.7 1 R.FEDLNAALFK.S FT_3a_25.10805.10805.2 1.9577 0.254 100.0 1167.7064 1168.3342 5650.6 7 5.137 61.1 1 R.FEDLNAALFK.S FT_3a_30.12656.12656.2 3.3835 0.4499 100.0 2895.3958 2895.106 8619.4 1 7.535 30.4 1 K.SINPDEAVAYGAAVQGAILTGQSTSDETK.D FT_3a_7.04150.04150.1 1.6104 0.2209 98.9 874.5086 874.02454 3359.7 1 5.519 64.3 1 R.NTTVPTIK.R * FT_3a_22.09507.09507.2 4.5851 0.5833 100.0 2464.1316 2464.616 7028.6 1 9.674 52.5 1 R.TFTTCADNQTTVQFPVYQGER.V FT_3a_29.12251.12251.2 1.8454 0.0185 95.3 1278.658 1279.432 3941.5 317 4.027 40.0 1 K.ENTLLGEFDLK.N FT_3a_16.07513.07513.4 3.3689 0.2607 100.0 2732.4465 2734.9805 5202.3 22 4.253 22.9 1 G.ILKVTAVEKS*T*GKSSNITISNAVGR.L FT_3a_9.04764.04764.1 1.7522 0.1384 97.7 1218.6454 1219.3397 3417.0 1 4.998 68.2 1 K.SSNITISNAVGR.L FT_3a_9.04805.04805.2 2.3034 0.1385 99.3 1218.6447 1219.3397 3559.9 1 6.192 72.7 1 K.SSNITISNAVGR.L FT_3a_32.13213.13213.2 4.1239 0.413 100.0 2170.1326 2167.4175 7758.7 1 6.964 52.6 1 R.LESYVASIEQTVTDPVLSSK.L FT_3a_38.15394.15394.2 5.3647 0.4603 100.0 2412.8127 2412.6555 8839.7 1 8.85 52.3 1 K.IEAALSDALAALQIEDPSADELR.K YKL042W 11 11 42.4% 363 42271 7.9 U SPC42 SGDID:S000001525, Chr XI from 358119-359210, Verified ORF, "Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane" * FT_3a_25.10786.10786.2 4.2455 0.5355 100.0 2528.1274 2528.7542 3953.4 1 9.327 55.3 1 R.LYDDYYNIPYQYSNPTPMNR.D * FT_3a_10.05077.05077.3 3.0516 0.4192 100.0 1576.8615 1575.8046 5847.7 1 6.464 47.9 1 R.INADKLVPEEYKR.N * FT_3a_6.03825.03825.2 1.5099 0.0476 94.0 832.47797 831.00244 2851.4 8 2.958 75.0 1 K.KIAETLR.S * FT_3a_14.06532.06532.2 4.2924 0.2628 100.0 1456.8228 1456.6818 6990.5 1 7.248 81.8 1 K.KLEDQNLNLQIK.I * FT_3a_20.08815.08815.2 4.3 0.4614 100.0 2518.2126 2518.7542 6327.5 1 8.511 52.4 1 K.VKDPMVDDDPVSENYDQINVPK.H * FT_3a_5.03539.03539.2 3.6396 0.6078 100.0 1191.5973 1192.279 4286.4 1 9.336 80.0 1 K.HRAPDATGNPR.T * FT_3a_10.05218.05218.2 2.288 0.1178 99.3 1275.5543 1274.4131 5445.9 3 3.772 72.2 1 K.RVEEEIEELK.R * FT_3a_37.15052.15052.2 2.6229 0.3997 100.0 2405.1726 2407.6724 7298.0 1 6.004 37.5 1 K.LSLNNQLQELQSMMDGDDNIK.L * FT_3a_15.06915.06915.2 3.8867 0.563 100.0 2253.9033 2254.2542 5494.3 1 10.184 63.9 1 R.DYSPSSDACLECSNDLYEK.N * FT_3a_12.05856.05856.2 2.5846 0.3403 100.0 1876.8751 1878.0632 5225.8 1 5.854 37.5 1 R.VKPENNMSETFATPTPN.N * FT_3a_9.04846.04846.2 4.0219 0.5481 100.0 2147.018 2148.3545 6167.6 1 9.049 55.6 1 R.VKPENNMSETFATPTPNNR.- YLR441C 9 9 40.8% 255 28743 10.0 U RPS1A SGDID:S000004433, Chr XII from 1018904-1018137, reverse complement, Verified ORF, "Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Bp and has similarity to rat S3a ribosomal protein" FT_3a_6.03840.03840.1 1.3768 0.2262 99.0 921.4443 921.9848 2726.8 43 4.347 42.9 1 K.APSTFENR.N * FT_3a_31.13045.13045.2 1.5224 0.0234 92.5 1893.0303 1894.0026 7227.0 23 2.783 31.2 1 K.TLVNKSTGLKS*AS*DALK.G FT_3a_23.09917.09917.2 4.946 0.5728 100.0 2062.9785 2062.2092 7805.6 1 10.073 70.6 1 R.VVEVCLADLQGSEDHSFR.K FT_3a_27.11572.11572.2 3.2162 0.5366 100.0 1754.8275 1754.9545 5002.6 1 7.705 64.3 1 K.NLLTNFHGMDFTTDK.L FT_3a_44.17798.17798.1 1.3419 0.2266 99.0 840.5341 841.9604 4954.7 1 4.244 80.0 1 K.LRS*MVR.K FT_3a_26.11053.11053.1 1.2971 0.0962 96.3 939.5498 939.14484 4874.4 52 3.797 50.0 1 R.IFAIAFTR.K * FT_3a_13.06145.06145.2 2.0938 0.2891 100.0 1362.7307 1362.5223 4449.9 43 5.537 41.7 1 K.EVQGSTLAQLTSK.L FT_3a_11.05707.05707.1 1.6817 0.1571 98.4 925.57245 926.1436 4254.3 4 4.395 57.1 1 K.LIPEVINK.E FT_3a_25.10852.10852.2 1.5552 0.2152 98.4 1351.7512 1352.5785 5397.9 109 4.512 40.0 1 K.DIFPLQNIHVR.K YNL209W 18 18 40.3% 613 66595 5.5 U SSB2 SGDID:S000005153, Chr XIV from 252060-253901, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; homolog of SSB1" FT_3a_6.03755.03755.2 2.0255 0.1526 99.3 883.4749 883.9823 5294.5 1 5.245 85.7 1 K.NQAALNPR.N FT_3a_30.12613.12613.2 5.7419 0.6367 100.0 2161.1145 2161.413 6498.4 1 11.526 72.2 1 K.VIDVDGNPVIEVQYLEETK.T FT_3a_21.09448.09448.2 2.5544 0.4317 100.0 1186.6636 1186.3531 5814.4 1 5.837 72.7 1 K.DAGAISGLNVLR.I FT_3a_25.10784.10784.3 4.4156 0.4378 100.0 2418.1362 2419.5688 7905.9 1 7.405 36.9 1 K.STSGNTHLGGQDFDTNLLEHFK.A FT_3a_9.04718.04718.1 1.6018 0.2319 98.9 1062.507 1063.1089 3900.4 1 4.549 55.6 1 K.TGLDISDDAR.A FT_3a_40.16362.16362.2 1.5774 0.3695 100.0 2963.018 2965.1506 6335.8 2 6.091 19.2 1 R.TLSSVTQTTVEVDSLFDGEDFESSLTR.A FT_3a_24.10295.10295.2 3.1797 0.2143 100.0 1395.7512 1395.6006 7143.2 1 7.153 68.2 1 R.ARFEDLNAALFK.S FT_3a_25.10861.10861.1 1.9723 0.4041 100.0 1167.6068 1168.3342 10262.7 1 6.238 66.7 1 R.FEDLNAALFK.S FT_3a_25.10805.10805.2 1.9577 0.254 100.0 1167.7064 1168.3342 5650.6 7 5.137 61.1 1 R.FEDLNAALFK.S FT_3a_30.12656.12656.2 3.3835 0.4499 100.0 2895.3958 2895.106 8619.4 1 7.535 30.4 1 K.SINPDEAVAYGAAVQGAILTGQSTSDETK.D FT_3a_7.04150.04150.1 1.6104 0.2209 98.9 874.5086 874.02454 3359.7 1 5.519 64.3 1 R.NTTVPTIK.R * FT_3a_23.09975.09975.2 3.9863 0.4447 100.0 2420.1697 2419.6091 6327.8 1 7.346 47.5 1 R.TFTTVSDNQTTVQFPVYQGER.V FT_3a_29.12251.12251.2 1.8454 0.0185 95.3 1278.658 1279.432 3941.5 317 4.027 40.0 1 K.ENTLLGEFDLK.N FT_3a_16.07513.07513.4 3.3689 0.2607 100.0 2732.4465 2734.9805 5202.3 22 4.253 22.9 1 G.ILKVTAVEKS*T*GKSSNITISNAVGR.L FT_3a_9.04764.04764.1 1.7522 0.1384 97.7 1218.6454 1219.3397 3417.0 1 4.998 68.2 1 K.SSNITISNAVGR.L FT_3a_9.04805.04805.2 2.3034 0.1385 99.3 1218.6447 1219.3397 3559.9 1 6.192 72.7 1 K.SSNITISNAVGR.L FT_3a_32.13213.13213.2 4.1239 0.413 100.0 2170.1326 2167.4175 7758.7 1 6.964 52.6 1 R.LESYVASIEQTVTDPVLSSK.L FT_3a_38.15394.15394.2 5.3647 0.4603 100.0 2412.8127 2412.6555 8839.7 1 8.85 52.3 1 K.IEAALSDALAALQIEDPSADELR.K YLR044C 16 19 36.9% 563 61495 6.2 U PDC1 SGDID:S000004034, Chr XII from 234082-232391, reverse complement, Verified ORF, "Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde; subject to glucose-, ethanol-, and autoregulation; involved in amino acid catabolism" * FT_3a_19.08637.08637.2 4.294 0.52 100.0 1998.9181 1999.1057 5785.9 1 8.914 61.1 3 R.WAGNANELNAAYAADGYAR.I * FT_3a_37.15030.15030.2 3.6321 0.4655 100.0 2522.2202 2523.8325 7972.3 1 7.631 37.0 1 R.MSANISETTAMITDIATAPAEIDR.C * FT_3a_32.13166.13166.2 3.3235 0.3943 100.0 2743.5247 2744.206 7599.0 1 6.153 35.4 1 R.TTYVTQRPVYLGLPANLVDLNVPAK.L * FT_3a_32.13293.13293.3 3.6909 0.1944 96.8 2744.5325 2744.206 7007.0 2 6.333 24.0 1 R.TTYVTQRPVYLGLPANLVDLNVPAK.L * FT_3a_34.13905.13905.2 4.0102 0.471 100.0 1893.0901 1894.264 4929.3 1 7.514 61.8 2 R.PVYLGLPANLVDLNVPAK.L * FT_3a_21.09217.09217.2 4.0391 0.5875 100.0 2130.0872 2130.4175 5897.3 1 9.778 58.3 1 K.LLQTPIDMSLKPNDAESEK.E * FT_3a_10.05360.05360.1 1.7619 0.2301 98.9 1376.6516 1376.4841 3220.3 1 5.287 50.0 1 K.NPVILADACCSR.H * FT_3a_36.14832.14832.2 2.8784 0.4513 100.0 1778.9606 1779.1469 7115.9 1 7.852 46.7 1 K.LIDLTQFPAFVTPMGK.G * FT_3a_13.06183.06183.1 1.524 0.2495 98.9 1092.5525 1093.2855 3811.5 1 5.311 55.6 1 R.NATFPGVQMK.F * FT_3a_13.06188.06188.2 1.7082 0.2176 98.6 1093.555 1093.2855 5245.8 1 4.819 72.2 1 R.NATFPGVQMK.F * FT_3a_7.03968.03968.2 1.7182 0.1725 98.4 1057.6151 1058.2682 4332.4 1 4.928 61.1 1 K.GYKPVAVPAR.T * FT_3a_8.04525.04525.2 2.367 0.1956 100.0 1337.7444 1338.5461 7711.8 1 4.359 53.8 1 R.TPANAAVPASTPLK.Q * FT_3a_34.14092.14092.2 3.0903 0.3527 100.0 2389.034 2389.672 7962.9 1 5.236 37.5 1 K.AQYNEIQGWDHLSLLPTFGAK.D * FT_3a_7.04101.04101.1 2.0399 0.3332 100.0 1007.48834 1007.08746 5989.9 1 6.527 68.8 1 R.VATTGEWDK.L * FT_3a_42.16901.16901.3 2.4049 0.2622 97.1 3428.7876 3429.8875 5088.7 5 4.577 17.9 1 K.S*FNDNSKIRMIEIMLPVFDAPQNLVEQAK.L * FT_3a_42.16901.16901.2 3.696 0.5221 100.0 2286.194 2287.737 5088.7 1 9.308 47.4 1 R.MIEIMLPVFDAPQNLVEQAK.L YML063W 9 9 35.7% 255 28812 10.0 U RPS1B SGDID:S000004528, Chr XIII from 146482-147249, Verified ORF, "Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Ap and has similarity to rat S3a ribosomal protein" * FT_3a_11.05629.05629.2 1.3927 0.0354 92.5 1089.6162 1090.3103 6521.8 100 3.253 56.2 1 K.KKVVDPFTR.K FT_3a_6.03840.03840.1 1.3768 0.2262 99.0 921.4443 921.9848 2726.8 43 4.347 42.9 1 K.APSTFENR.N FT_3a_23.09917.09917.2 4.946 0.5728 100.0 2062.9785 2062.2092 7805.6 1 10.073 70.6 1 R.VVEVCLADLQGSEDHSFR.K FT_3a_27.11572.11572.2 3.2162 0.5366 100.0 1754.8275 1754.9545 5002.6 1 7.705 64.3 1 K.NLLTNFHGMDFTTDK.L FT_3a_44.17798.17798.1 1.3419 0.2266 99.0 840.5341 841.9604 4954.7 1 4.244 80.0 1 K.LRS*MVR.K FT_3a_26.11053.11053.1 1.2971 0.0962 96.3 939.5498 939.14484 4874.4 52 3.797 50.0 1 R.IFAIAFTR.K * FT_3a_13.06205.06205.1 1.5925 0.242 98.8 930.56335 931.1198 3910.5 8 4.311 57.1 1 K.VISEILTR.E FT_3a_11.05707.05707.1 1.6817 0.1571 98.4 925.57245 926.1436 4254.3 4 4.395 57.1 1 K.LIPEVINK.E FT_3a_25.10852.10852.2 1.5552 0.2152 98.4 1351.7512 1352.5785 5397.9 109 4.512 40.0 1 K.DIFPLQNIHVR.K YDR450W 6 7 34.2% 146 17038 10.3 U RPS18A SGDID:S000002858, Chr IV from 1359913-1359959,1360395-1360788, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Bp and has similarity to E. coli S13 and rat S18 ribosomal proteins" YML026C 6 7 34.2% 146 17038 10.3 U RPS18B SGDID:S000004488, Chr XIII from 223828-223782,223380-222987, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similarity to E. coli S13 and rat S18 ribosomal proteins" FT_3a_16.07401.07401.2 1.7827 0.0869 97.3 1510.738 1511.5449 6592.8 44 3.268 36.4 1 K.RAGELT*QEELER.I FT_3a_12.05815.05815.2 2.7127 0.2964 100.0 1471.7748 1472.7449 6292.3 1 6.321 59.1 1 R.IVQIMQNPTHYK.I FT_3a_27.11342.11342.1 1.9794 0.2309 100.0 1016.56903 1017.21814 3166.2 1 7.018 71.4 1 K.IPAWFLNR.Q FT_3a_27.11344.11344.2 2.3782 0.2484 100.0 1019.57666 1017.21814 4953.8 1 6.211 92.9 2 K.IPAWFLNR.Q FT_3a_8.04412.04412.3 2.8985 0.1925 97.1 1392.6704 1391.4796 6132.9 1 5.341 40.9 1 K.DYHTLANNVESK.L FT_3a_17.07681.07681.2 2.0598 0.4062 100.0 815.43195 815.95233 3109.5 3 6.791 90.0 1 R.HFWGLR.V YPL131W 9 9 33.7% 297 33715 6.8 U RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly" * FT_3a_29.12271.12271.2 1.4689 0.0611 93.3 1458.8666 1456.5577 5632.2 1 3.132 50.0 1 K.Y*RLVVRFT*NK.D * FT_3a_14.06789.06789.2 1.1932 0.1276 92.7 1057.7057 1057.1942 4037.7 5 3.727 57.1 1 R.LVVRFT*NK.D * FT_3a_9.04926.04926.1 1.1362 0.0966 95.2 938.48364 939.0527 4248.8 14 3.521 50.0 1 K.LGLDETYK.G * FT_3a_28.11991.11991.2 4.1471 0.4884 100.0 2580.1921 2580.764 7026.0 1 8.014 45.5 1 K.GVEEVEGEYELTEAVEDGPRPFK.V * FT_3a_25.10896.10896.2 1.7888 0.2976 100.0 1060.6145 1061.2688 4516.0 1 5.313 81.2 1 K.VFLDIGLQR.T * FT_3a_7.04267.04267.2 4.1657 0.6061 100.0 1558.7273 1559.6348 3259.6 1 9.236 75.0 1 K.GASDGGLYVPHSENR.F * FT_3a_37.15072.15072.2 4.2666 0.581 100.0 2093.9915 2094.2842 5888.0 1 9.769 62.5 1 R.FPGWDFETEEIDPELLR.S * FT_3a_15.06933.06933.1 1.6767 0.2702 100.0 770.4091 770.903 4119.2 1 5.175 80.0 1 R.FSELFK.G * FT_3a_10.05119.05119.2 1.5024 0.0614 93.4 1140.672 1141.3556 5108.5 9 3.728 45.5 1 R.VAAKIAALAGQQ.- YMR142C 8 8 33.7% 199 22525 11.1 U RPL13B SGDID:S000004750, Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein" * FT_3a_8.04336.04336.1 1.4051 0.2119 98.3 964.52277 965.09656 4262.1 1 5.488 55.6 1 K.AAGLTAAYAR.T * FT_3a_8.04323.04323.2 2.0297 0.4686 100.0 964.52264 965.09656 3510.8 1 7.092 77.8 1 K.AAGLTAAYAR.T * FT_3a_11.05387.05387.2 1.792 0.1698 98.3 1335.7107 1334.4307 4503.2 2 3.566 70.0 1 R.NQEIFDANVQR.L * FT_3a_16.07540.07540.1 1.1665 0.1636 97.2 745.4818 744.95483 4677.9 3 4.068 70.0 1 K.IIVFPR.D * FT_3a_30.12458.12458.3 2.9191 0.1992 97.6 2956.4995 2955.2505 6564.4 31 3.609 19.6 1 R.DGKAPEAEQVLSAAATFPIAQPATDVEAR.A * FT_3a_31.12780.12780.2 4.9232 0.4997 100.0 2654.3508 2654.936 6465.0 1 10.718 44.0 1 K.APEAEQVLSAAATFPIAQPATDVEAR.A * FT_3a_4.03107.03107.2 3.083 0.3334 100.0 1260.68 1261.4174 4290.2 1 7.013 75.0 1 R.EKAEAEAEKKK.- * FT_3a_57.22426.22426.1 1.7994 7.0E-4 93.2 875.4928 875.9537 6383.5 1 3.538 78.6 1 K.AEAEAEKK.K YOL039W 2 2 29.2% 106 10746 4.0 U RPP2A SGDID:S000005399, Chr XV from 254295-254615, Verified ORF, "Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * FT_3a_32.13320.13320.2 3.7887 0.4542 100.0 1981.0509 1981.2555 7367.2 1 8.955 58.3 1 K.YLAAYLLLNAAGNTPDATK.I * FT_3a_11.05678.05678.1 1.8269 0.17 98.3 1333.6516 1334.4222 4462.4 4 4.794 45.5 1 K.SVDELITEGNEK.L YHR174W 9 9 28.8% 437 46914 6.0 U ENO2 SGDID:S000001217, Chr VIII from 451327-452640, Verified ORF, "Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is induced in response to glucose" FT_3a_23.09864.09864.3 6.24 0.4342 100.0 2584.3132 2584.845 9510.9 1 7.923 40.9 1 R.SVYDSRGNPTVEVELTTEKGVFR.S FT_3a_25.10740.10740.2 2.2986 0.3524 100.0 1375.6598 1374.4988 6073.2 1 5.13 59.1 1 K.IGLDCASSEFFK.D * FT_3a_13.06426.06426.1 1.1475 0.1698 97.2 1471.315 1471.5627 7059.1 32 3.852 31.8 1 K.YDLDFKNPESDK.S * FT_3a_26.11246.11246.2 3.3486 0.4559 100.0 1854.9941 1856.0856 6075.1 1 8.078 58.8 1 K.TAGIQIVADDLTVTNPAR.I FT_3a_12.05948.05948.1 1.3038 0.1551 97.9 814.5046 815.00006 4986.8 6 4.31 57.1 1 K.AADALLLK.V FT_3a_41.16725.16725.2 4.425 0.6034 100.0 1821.9354 1823.0093 6968.4 1 9.783 59.4 1 R.SGETEDTFIADLVVGLR.T FT_3a_6.03640.03640.2 1.6994 0.1548 98.1 1471.7988 1472.6438 5446.8 2 3.958 46.2 1 R.TGQIKTGAPARSER.L * FT_3a_7.03931.03931.1 2.0095 0.158 99.1 932.45825 933.00256 4572.2 1 4.191 71.4 1 R.IEEELGDK.A * FT_3a_18.08010.08010.3 2.9874 0.2939 100.0 2474.3953 2472.6726 6299.2 2 4.549 26.2 1 R.IEEELGDKAVYAGENFHHGDKL.- YPL124W 6 6 28.5% 253 29280 9.5 U SPC29 SGDID:S000006045, Chr XVI from 316754-317515, Verified ORF, "Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication" * FT_3a_31.12928.12928.2 1.2862 0.036 90.7 1480.7922 1481.4034 4892.7 6 2.601 40.9 1 -.MDYSNFGNS*AS*K.K * FT_3a_5.03432.03432.2 3.0941 0.3657 100.0 1112.6136 1112.2706 5524.1 1 7.208 87.5 1 R.KEHEEALKK.L * FT_3a_23.09931.09931.2 2.8124 0.5445 100.0 1758.8734 1759.032 3880.4 1 7.712 50.0 1 R.LPPPPFSSYGMPPTNR.S * FT_3a_8.04555.04555.2 2.4113 0.3795 100.0 1292.6243 1293.3782 5237.0 1 6.768 75.0 1 K.FASQNVIDDQR.L * FT_3a_22.09579.09579.2 4.1889 0.5378 100.0 1694.8817 1694.8816 6876.2 1 9.196 67.9 1 R.IVYDQGTVIDNLTSR.I * FT_3a_10.05155.05155.1 1.4276 0.0921 96.8 984.4794 985.0838 4350.3 9 3.262 56.2 1 R.SFSGFPTNK.T YAL005C 16 17 27.6% 642 69768 5.1 U SSA1 SGDID:S000000004, Chr I from 141433-139505, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall" * FT_3a_12.05961.05961.2 2.5027 0.2795 100.0 1607.7504 1608.7656 4180.5 2 6.652 46.4 1 K.NQAAMNPSNTVFDAK.R * FT_3a_23.09925.09925.2 3.354 0.4121 100.0 1897.9414 1896.066 4820.1 1 6.55 40.6 2 K.VNDAVVTVPAYFNDSQR.Q * FT_3a_24.10482.10482.2 4.4801 0.5502 100.0 1659.8984 1660.9072 5405.8 1 9.537 73.3 1 R.IINEPTAAAIAYGLDK.K * FT_3a_22.09736.09736.2 1.8362 0.0784 97.0 1789.9172 1789.0813 6297.3 43 3.567 31.2 1 R.IINEPTAAAIAYGLDKK.G * FT_3a_20.08856.08856.2 2.118 0.4368 100.0 1275.677 1275.4924 5490.5 1 6.784 66.7 1 R.LVNHFIQEFK.R * FT_3a_20.08898.08898.3 2.0612 0.2614 97.0 1274.6903 1275.4924 4805.4 1 4.179 52.8 1 R.LVNHFIQEFK.R * FT_3a_27.11484.11484.2 3.6434 0.5256 100.0 1526.7427 1527.6855 5008.6 1 9.089 81.8 1 R.ARFEELCADLFR.S * FT_3a_27.11601.11601.2 2.3325 0.2996 100.0 1299.7856 1300.4193 6234.1 1 6.131 72.2 1 R.FEELCADLFR.S * FT_3a_19.08441.08441.2 1.7672 0.0428 94.7 1460.7799 1460.6268 5424.2 37 3.272 46.2 1 K.SQVDEIVLVGGSTR.I * FT_3a_15.06872.06872.1 1.4978 0.2811 100.0 1057.52 1057.1907 3745.7 2 5.002 50.0 1 K.LVTDYFNGK.E * FT_3a_12.06055.06055.2 2.5358 0.3255 100.0 1553.7598 1553.7142 6043.7 1 5.492 54.2 1 K.LVTDYFNGKEPNR.S * FT_3a_35.14479.14479.2 5.5594 0.65 100.0 2578.28 2578.7917 10323.6 1 11.716 48.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T * FT_3a_37.15235.15235.2 2.1075 0.1826 98.9 1719.9266 1720.9752 6857.4 9 4.675 35.7 1 R.LSKEDIEKMVAEAEK.F * FT_3a_6.03605.03605.2 3.6166 0.3993 100.0 1424.6677 1425.4943 8509.8 1 7.374 85.0 1 K.FKEEDEKESQR.I * FT_3a_10.05035.05035.2 3.7849 0.4704 100.0 1619.798 1619.7252 6702.0 1 8.102 75.0 1 K.NTISEAGDKLEQADK.D * FT_3a_14.06703.06703.2 2.4882 0.218 100.0 1359.7018 1359.58 5693.6 1 4.77 54.5 1 K.ELQDIANPIMSK.L YLR075W 6 6 26.2% 221 25361 10.0 U RPL10 SGDID:S000004065, Chr XII from 282928-283593, Verified ORF, "Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subunits; regulates translation initiation; has similarity to rat L10 ribosomal protein and to members of the QM gene family" * FT_3a_7.03980.03980.2 2.0371 0.2723 100.0 1220.6654 1221.4067 4811.0 1 5.634 59.1 1 R.GAWGKPHGLAAR.V * FT_3a_34.13990.13990.2 3.1282 0.5893 100.0 1246.7153 1247.4796 5740.4 1 10.539 80.0 1 R.VDIGQIIFSVR.T * FT_3a_10.05297.05297.1 1.3655 0.202 98.3 886.4999 887.02325 3009.3 3 4.64 57.1 1 K.DVVVEGLR.R * FT_3a_5.03210.03210.2 1.6908 0.149 98.4 916.4847 917.05255 5043.9 15 3.803 71.4 1 K.KREAGEVK.D * FT_3a_6.03815.03815.2 3.0907 0.2569 100.0 1030.565 1031.1564 3840.9 1 5.788 81.2 1 K.KGSLENNIR.E * FT_3a_25.10853.10853.1 1.6529 0.2736 100.0 1173.5312 1173.2665 6320.5 2 4.946 44.4 1 R.EFPEYFAAQA.- YOR257W 3 3 26.1% 161 18751 4.6 U CDC31 SGDID:S000005783, Chr XV from 811006-811491, Verified ORF, "Component of the spindle pole body (SPB) half-bridge, required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; interacts with Kar1p" * FT_3a_20.08996.08996.2 3.9907 0.422 100.0 1860.0927 1860.0276 3236.9 1 7.55 59.4 1 R.SSLQSGPLNSELLEEQK.Q * FT_3a_30.12408.12408.2 3.7542 0.4673 100.0 1667.7876 1667.7662 7476.5 1 8.713 69.2 1 R.EILDLIDEYDSEGR.H * FT_3a_26.11091.11091.2 3.1765 0.5037 100.0 1379.6191 1380.5544 6408.6 1 8.513 80.0 1 K.YDDFYIVMGEK.I YBR109C 3 3 24.5% 147 16135 4.3 U CMD1 SGDID:S000000313, Chr II from 458356-457913, reverse complement, Verified ORF, "Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca++ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin" * FT_3a_26.11219.11219.2 3.1937 0.4057 100.0 1510.7124 1510.597 5422.1 1 6.894 75.0 1 K.SNDSEQELLEAFK.V * FT_3a_32.13195.13195.2 2.4188 0.4187 100.0 2145.129 2146.2927 4504.1 1 5.601 33.3 1 D.MLREVSDGS*GEINIQQFAA.L * FT_3a_37.14994.14994.2 4.4591 0.5335 100.0 2107.7527 2107.3245 7426.4 1 9.204 65.8 1 R.EVSDGSGEINIQQFAALLSK.- YDR385W 18 18 23.4% 842 93289 6.3 U EFT2 SGDID:S000002793, Chr IV from 1243220-1245748, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin" YOR133W 18 18 23.4% 842 93289 6.3 U EFT1 SGDID:S000005659, Chr XV from 575098-577626, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin" FT_3a_14.06668.06668.2 2.4133 0.4136 100.0 1066.5344 1067.2476 6620.2 1 7.584 93.8 1 M.VAFTVDQMR.S FT_3a_23.09880.09880.2 3.1832 0.5073 100.0 1774.8099 1775.9215 6788.6 1 7.641 63.3 1 K.STAISLYSEMSDEDVK.E FT_3a_19.08498.08498.1 1.6109 0.0692 96.3 1142.5498 1143.2408 3689.3 1 3.933 62.5 1 K.EDLYQTFAR.T FT_3a_19.08423.08423.2 1.6082 0.1305 97.8 1142.5466 1143.2408 5099.9 4 3.897 75.0 1 K.EDLYQTFAR.T FT_3a_22.09567.09567.1 1.819 0.3016 100.0 1575.6941 1576.749 5676.7 16 4.933 37.5 1 F.NPKTKKWTNKDTD.A FT_3a_18.08079.08079.2 3.2114 0.2644 100.0 1183.6975 1184.418 5748.8 1 6.18 77.8 1 K.KDEIPVLLEK.L FT_3a_14.06681.06681.1 1.8332 0.0683 97.3 715.37256 714.9231 3573.2 1 4.0 80.0 1 K.LEIVLK.G FT_3a_18.08279.08279.2 2.7618 0.4448 100.0 1977.9229 1979.1163 7441.9 1 6.508 38.2 1 R.AEQLYEGPADDANCIAIK.N FT_3a_13.06464.06464.1 1.1804 0.0733 94.2 750.405 750.8694 3833.0 5 3.406 70.0 1 K.DDLFIK.A FT_3a_34.14228.14228.2 4.2464 0.4177 100.0 2180.1301 2180.4192 8108.9 1 8.074 52.6 1 K.AEPIDEEVSLAIENGIINPR.D FT_3a_29.12188.12188.2 4.1447 0.5608 100.0 2132.0312 2132.346 8196.4 1 9.212 55.6 1 K.IWCFGPDGNGPNLVIDQTK.A FT_3a_25.10601.10601.2 2.4709 0.4738 100.0 1266.6729 1267.4668 5342.2 1 7.228 63.6 1 R.ATYAGFLLADPK.I FT_3a_18.07999.07999.2 4.7408 0.5608 100.0 1974.061 1973.2358 9283.5 1 9.49 52.9 1 R.GQVVSEEQRPGTPLFTVK.A FT_3a_29.12329.12329.2 3.7018 0.4629 100.0 1801.9087 1801.008 4930.7 1 8.176 70.0 1 K.AYLPVNESFGFTGELR.Q FT_3a_29.12088.12088.2 2.2263 0.2792 96.8 1729.9927 1729.9293 6760.7 15 4.672 35.7 1 A.YLPVNESFGFTGELR.Q FT_3a_8.04620.04620.2 2.0373 0.3597 100.0 1313.7761 1313.5394 4822.4 1 5.32 54.2 1 D.PTSKAGEIVLAAR.K FT_3a_9.04838.04838.1 1.5278 0.0726 96.3 899.53235 900.06537 4350.6 3 3.996 56.2 1 K.AGEIVLAAR.K FT_3a_19.08624.08624.2 1.757 0.1915 98.3 1542.6764 1543.6288 5876.0 197 3.933 36.4 1 K.EEVPGWQEYYDK.L YDR356W 17 17 20.0% 944 111782 7.1 U SPC110 SGDID:S000002764, Chr IV from 1186098-1188932, Verified ORF, "Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner" * FT_3a_28.12002.12002.2 4.0562 0.4464 100.0 1861.8837 1861.0143 8636.1 1 7.93 66.7 1 R.LFSEASQFDDSFPEIK.A * FT_3a_23.10156.10156.2 1.5817 0.0834 94.7 1443.9039 1443.4692 5552.9 133 3.067 40.9 1 R.HITY*ANSDISNK.E * FT_3a_22.09582.09582.2 4.1443 0.4288 100.0 2142.9426 2143.1787 6015.0 1 8.929 61.8 1 K.NDTLNNYDTLEEETDDLK.N * FT_3a_27.11354.11354.2 1.4912 0.0497 93.4 1217.6218 1218.4102 4692.6 102 3.459 44.4 1 K.NLMNELNELK.S * FT_3a_9.04815.04815.1 1.6573 0.2051 99.0 880.44214 880.97266 3533.4 1 5.112 75.0 1 K.DTQLEFK.K FT_3a_8.04397.04397.2 2.0021 0.018 97.8 960.49976 961.0593 4084.9 2 4.27 85.7 1 R.TNELNELK.I * FT_3a_10.05309.05309.2 2.2751 0.1968 100.0 1332.7042 1332.4932 6260.1 4 5.002 65.0 1 R.LKDELNELETK.F * FT_3a_8.04441.04441.2 3.9801 0.4631 100.0 1287.6923 1288.443 7894.3 1 9.375 90.9 1 K.ISNLAAENSQLK.N * FT_3a_6.03617.03617.2 3.1483 0.4332 100.0 1332.7322 1332.4991 8611.2 1 7.394 72.7 1 R.IAENSAKVSEKR.S * FT_3a_10.05274.05274.1 1.5587 0.1852 98.3 1161.6006 1162.2817 7291.4 3 4.229 55.6 1 K.LQEDEISSLK.S * FT_3a_29.12201.12201.2 5.3603 0.5297 100.0 2351.2117 2351.578 9772.3 1 9.143 57.9 1 K.SEQSNIQHDLNLQILNLENK.L * FT_3a_14.06607.06607.1 1.5978 0.1946 99.1 931.48975 932.06366 5628.0 3 4.107 66.7 1 K.IEIENWK.R * FT_3a_6.03828.03828.2 3.332 0.3265 100.0 1588.7593 1589.6586 5398.5 1 7.078 79.2 1 R.EKEELNENSNNIR.I * FT_3a_29.12358.12358.2 3.8597 0.5326 100.0 1920.8782 1921.0852 5511.2 1 8.487 56.7 1 K.DNDSTMQLNDIISYYK.L * FT_3a_9.04697.04697.1 1.5045 0.1419 97.8 978.52655 979.1204 6057.3 27 4.787 57.1 1 K.VINDYLNK.V * FT_3a_10.05332.05332.1 1.5633 0.2964 100.0 1255.6672 1256.3593 4564.3 1 4.909 62.5 1 R.YHDYEYPLR.F * FT_3a_11.05390.05390.2 1.8263 0.1433 98.3 1258.676 1256.3593 5780.1 1 3.531 62.5 1 R.YHDYEYPLR.F YGL008C 12 13 19.5% 918 99619 5.1 U PMA1 SGDID:S000002976, Chr VII from 482671-479915, reverse complement, Verified ORF, "Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plasma membrane potential; part of the P2 subgroup of cation-transporting ATPases" * FT_3a_11.05588.05588.1 1.6363 0.074 96.9 1057.6366 1058.2657 5043.2 2 4.159 55.6 1 K.TLANTAVVIR.D * FT_3a_36.14897.14897.2 2.5393 0.4133 100.0 3260.6814 3261.6099 4356.5 1 6.949 25.0 2 R.DGQLVEIPANEVVPGDILQLEDGTVIPTDGR.I * FT_3a_25.10858.10858.2 4.1418 0.554 100.0 1857.8846 1859.0631 7112.1 1 9.059 50.0 1 R.GEGFMVVTATGDNTFVGR.A * FT_3a_31.12895.12895.2 4.1292 0.564 100.0 1804.9415 1806.0289 7255.2 1 9.615 53.1 1 K.LSAIESLAGVEILCSDK.T * FT_3a_24.10284.10284.2 3.4091 0.5612 100.0 1416.7402 1415.6311 5936.9 1 9.455 77.3 1 K.VLEFHPFDPVSK.K * FT_3a_8.04315.04315.2 4.4861 0.5606 100.0 2296.0232 2295.3801 8756.3 1 8.184 50.0 1 K.TVEEDHPIPEDVHENYENK.V * FT_3a_6.03787.03787.2 2.4218 0.3371 100.0 1542.7533 1543.6329 5569.9 1 5.968 57.7 1 D.PPRDDTAQTVSEAR.H * FT_3a_52.20673.20673.2 1.3159 0.0064 90.1 2156.2927 2156.1528 5286.4 36 2.732 28.1 1 K.ET*CRQLGLGT*NIYNAER.L * FT_3a_18.08219.08219.2 2.1527 0.1077 98.3 1449.7579 1449.6061 4627.0 17 3.827 50.0 1 R.QLGLGTNIYNAER.L * FT_3a_10.05162.05162.1 1.2546 0.1266 97.4 970.56946 971.14417 3785.1 35 3.89 50.0 1 R.VVEILQNR.G * FT_3a_23.09922.09922.2 3.7235 0.5199 100.0 1808.898 1809.0436 6545.1 1 9.161 55.9 1 R.GYLVAMTGDGVNDAPSLK.K * FT_3a_8.04560.04560.2 3.7388 0.5929 100.0 1419.7007 1418.5028 5865.2 1 9.222 75.0 1 K.ADTGIAVEGATDAAR.S YLR150W 4 4 19.4% 273 29995 9.7 U STM1 SGDID:S000004140, Chr XII from 440468-441289, Verified ORF, "Protein that binds G4 quadruplex and purine motif triplex nucleic acid; acts with Cdc13p to maintain telomere structure; interacts with ribosomes and subtelomeric Y' DNA; multicopy suppressor of tom1 and pop2 mutations" * FT_3a_9.04659.04659.2 1.2621 0.0618 92.2 903.4969 900.96643 4923.0 209 3.176 50.0 1 R.PSGNEGAIR.D * FT_3a_47.18689.18689.2 1.2301 0.049 90.8 2571.4307 2573.8777 7115.0 12 3.311 23.8 1 K.KSNTRRATDRHSRTGKTDTKKK.V * FT_3a_30.12713.12713.2 1.9674 0.2657 97.2 1475.8925 1474.5237 3562.0 19 4.78 45.5 1 K.T*AQLSLQDYLNQ.Q * FT_3a_16.07234.07234.2 1.3677 0.1345 94.2 1173.6472 1172.4563 5770.1 7 3.533 50.0 1 K.VKNVKSKQLK.T YGR254W 6 6 18.8% 437 46816 6.6 U ENO1 SGDID:S000003486, Chr VII from 1000932-1002245, Verified ORF, "Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is repressed in response to glucose" FT_3a_23.09864.09864.3 6.24 0.4342 100.0 2584.3132 2584.845 9510.9 1 7.923 40.9 1 R.SVYDSRGNPTVEVELTTEKGVFR.S * FT_3a_6.03730.03730.1 1.5579 0.298 100.0 938.50714 937.0831 5004.8 4 4.733 42.9 1 A.LRIGSEVY.H FT_3a_25.10740.10740.2 2.2986 0.3524 100.0 1375.6598 1374.4988 6073.2 1 5.13 59.1 1 K.IGLDCASSEFFK.D FT_3a_12.05948.05948.1 1.3038 0.1551 97.9 814.5046 815.00006 4986.8 6 4.31 57.1 1 K.AADALLLK.V FT_3a_41.16725.16725.2 4.425 0.6034 100.0 1821.9354 1823.0093 6968.4 1 9.783 59.4 1 R.SGETEDTFIADLVVGLR.T FT_3a_6.03640.03640.2 1.6994 0.1548 98.1 1471.7988 1472.6438 5446.8 2 3.958 46.2 1 R.TGQIKTGAPARSER.L YNL225C 5 5 11.7% 581 67400 6.0 U CNM67 SGDID:S000005169, Chr XIV from 224470-222725, reverse complement, Verified ORF, "Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration" * FT_3a_40.16412.16412.2 4.6302 0.5286 100.0 2420.2144 2420.6929 7511.0 1 8.231 55.0 1 K.SILPLFVNPEDVINCNFSNAR.D * FT_3a_15.06870.06870.2 2.2798 0.2141 100.0 1051.6034 1050.2426 4183.4 3 5.934 68.8 1 K.IFLQNSLSK.E * FT_3a_22.09719.09719.2 2.8163 0.305 100.0 1659.9062 1658.9323 5646.5 1 5.187 61.5 1 K.KIEEQTVLIENLTK.D * FT_3a_15.06899.06899.2 2.4649 0.3668 100.0 1524.7098 1525.6239 5547.1 1 5.953 58.3 1 K.GFLCASQQEELSR.I * FT_3a_8.04414.04414.2 1.3302 0.0625 92.6 1225.146 1224.2719 6223.6 55 3.453 45.0 1 R.FGNLEGNTSER.I YJL034W 4 4 10.6% 682 74468 4.9 U KAR2 SGDID:S000003571, Chr X from 381243-383291, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p" FT_3a_23.10073.10073.2 1.9482 0.0414 96.1 1647.9652 1646.8804 2913.0 33 4.144 40.0 1 R.IVNEPTAAAIAYGLDK.S FT_3a_9.04997.04997.1 1.2932 0.0889 95.2 848.4566 848.0758 2896.8 14 3.516 58.3 1 R.QLIKAFK.K FT_3a_18.08126.08126.4 3.3195 0.2644 100.0 3592.8582 3590.9807 4788.0 429 3.78 15.6 1 R.ALSSQMSTRIEIDSFVDGIDLSETLTRAKFEE.L FT_3a_25.10799.10799.2 2.5116 0.1889 97.1 1792.8981 1792.9866 5362.2 7 4.31 37.5 1 D.KGTGKSESITITNDKGR.L Reverse_YLR457C 2 2 10.0% 319 37354 10.2 U NBP1 SGDID:S000004449, Chr XII from 1056768-1055809, reverse complement, Verified ORF, "Component of the mitotic apparatus containing a coiled-coil domain, essential for the G2/M transition" * FT_3a_25.10651.10651.4 2.7803 0.2805 96.2 2684.5498 2687.1724 4108.2 131 4.569 22.5 1 K.MPSSTFLSNTRRIPSPSLDIKLPK.I * FT_3a_55.21937.21937.1 1.0361 0.0759 92.8 1109.6829 1109.1156 7399.3 18 3.509 50.0 1 R.ALNS*MT*RR.S Reverse_YLR150W 2 2 9.5% 273 29995 9.7 U STM1 SGDID:S000004140, Chr XII from 440468-441289, Verified ORF, "Protein that binds G4 quadruplex and purine motif triplex nucleic acid; acts with Cdc13p to maintain telomere structure; interacts with ribosomes and subtelomeric Y' DNA; multicopy suppressor of tom1 and pop2 mutations" * FT_3a_17.07686.07686.2 1.7976 0.2032 98.3 1948.8649 1950.1113 6518.2 11 3.923 36.7 1 K.RTNSEVFTADFELYEK.T * FT_3a_6.03752.03752.2 1.8739 0.0317 96.7 1146.5752 1147.2322 5696.7 2 4.199 72.2 1 K.KDDGWGQNVK.K YLR457C 4 4 9.4% 319 37354 10.2 U NBP1 SGDID:S000004449, Chr XII from 1056768-1055809, reverse complement, Verified ORF, "Component of the mitotic apparatus containing a coiled-coil domain, essential for the G2/M transition" * FT_3a_6.03790.03790.2 1.5666 0.0928 97.0 925.58435 925.97974 3524.1 69 4.07 58.3 1 K.RSALRS*R.R * FT_3a_8.04312.04312.1 1.638 0.322 100.0 1161.5194 1162.1672 5121.0 19 5.127 50.0 1 K.RS*ALRS*RR.K * FT_3a_9.04670.04670.1 1.4267 0.0163 91.4 1008.51447 1009.1063 3856.3 8 3.83 57.1 1 R.NQSLYLDR.E * FT_3a_19.08680.08680.2 4.2415 0.475 100.0 1636.817 1637.7863 5606.7 1 9.219 69.2 1 K.LQSLQEALNYSNEK.Y YGL075C 3 3 9.0% 387 44585 8.3 U MPS2 SGDID:S000003043, Chr VII from 368091-366928, reverse complement, Verified ORF, "Essential membrane protein localized at the nuclear envelope and spindle pole body (SPB), required for insertion of the newly duplicated SPB into the nuclear envelope; potentially phosphorylated by Cdc28p" * FT_3a_30.12615.12615.2 1.2652 0.0374 90.8 2422.1726 2424.6267 7312.9 212 3.261 21.1 1 R.ELTAKQS*LLQENERQVSELK.I * FT_3a_9.04667.04667.2 1.5507 0.0399 94.1 973.66266 973.1601 4069.1 6 2.764 71.4 1 R.QVSELKIR.L * FT_3a_32.13385.13385.2 1.4488 0.0341 92.6 1512.782 1514.551 4939.7 36 3.299 37.5 1 K.RKHATT*DGDGTFK.N YPL255W 2 2 8.1% 385 45384 6.5 U BBP1 SGDID:S000006176, Chr XVI from 67725-68882, Verified ORF, "Protein required for the spindle pole body (SPB) duplication, localized at the central plaque periphery; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p" * FT_3a_31.12942.12942.2 1.5724 0.039 93.2 1767.0476 1769.0134 5492.8 1 2.809 42.9 1 R.S*LRSPAPIVPREPLR.N * FT_3a_16.07422.07422.2 3.5175 0.5247 100.0 1769.9025 1770.9365 6376.0 1 7.995 53.3 1 K.VLDQTISHEAELATSR.E YJR053W 6 6 8.0% 574 66087 5.9 U BFA1 SGDID:S000003814, Chr X from 533941-535665, Verified ORF, "Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis" * FT_3a_26.11039.11039.2 1.2644 0.0671 92.2 1342.783 1345.6606 5432.7 60 2.977 45.0 1 K.QPRSMMELKPK.R * FT_3a_15.07108.07108.2 1.3689 0.0832 93.2 1374.443 1373.5112 9131.9 87 3.368 40.0 1 K.KRSSSPFLRS*K.S * FT_3a_20.08884.08884.2 1.4792 0.0675 94.0 1031.5928 1030.085 3053.4 19 3.054 57.1 1 K.RSS*SPFLR.S * FT_3a_13.06283.06283.2 3.1952 0.3654 100.0 2785.1528 2785.9434 6568.9 1 7.302 34.0 1 R.SKSQVNTPFVSNDNDGVYQSTAAQAR.L * FT_3a_16.07397.07397.2 5.184 0.6085 100.0 2572.1975 2570.691 8156.9 1 10.586 43.5 1 K.SQVNTPFVSNDNDGVYQSTAAQAR.L * FT_3a_16.07373.07373.3 2.6816 0.2996 100.0 2570.1985 2570.691 5279.6 406 4.534 21.7 1 K.SQVNTPFVSNDNDGVYQSTAAQAR.L Reverse_YPL131W 2 2 7.7% 297 33715 6.8 U RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly" * FT_3a_7.04094.04094.2 1.4123 0.0091 91.9 1211.7162 1212.2609 5270.7 41 3.059 50.0 1 K.ET*PKFAPDAR.I * FT_3a_13.06399.06399.2 1.4334 0.0653 92.6 1507.7493 1506.6573 6645.6 26 3.097 45.8 1 R.FPTQFRSSYASSK.A YMR186W 4 4 7.2% 705 80900 4.8 U HSC82 SGDID:S000004798, Chr XIII from 632354-634471, Verified ORF, "Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels that HSP82 and induced 2-3 fold by heat shock" * FT_3a_31.13089.13089.2 3.8815 0.3297 100.0 1745.9136 1746.0587 8413.9 1 7.185 64.3 1 R.HSEFVAYPIQLLVTK.E * FT_3a_6.03799.03799.2 3.8301 0.1873 100.0 1732.8396 1731.8506 5746.0 1 6.106 73.1 1 K.LEEVDEEEEEKKPK.T * FT_3a_20.08901.08901.2 4.3114 0.4456 100.0 1821.8291 1819.9214 8101.8 1 7.746 75.0 1 R.NPSDITQEEYNAFYK.S * FT_3a_9.04701.04701.1 1.3935 0.1822 98.4 821.44025 821.9482 3786.7 3 4.604 75.0 1 K.TFEISPK.S Reverse_YNL225C 3 3 7.1% 581 67400 6.0 U CNM67 SGDID:S000005169, Chr XIV from 224470-222725, reverse complement, Verified ORF, "Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration" * FT_3a_31.13080.13080.2 1.4789 0.1895 97.5 1524.5387 1521.7253 4894.9 33 4.104 37.5 1 K.TQITDNAKELMEK.N * FT_3a_34.14195.14195.2 1.6952 0.0996 95.8 1975.0327 1974.1375 5092.0 178 3.309 25.0 1 K.TAAELEKQLSNAREEQR.L * FT_3a_36.14807.14807.2 1.5178 0.1195 94.7 1828.5928 1828.0782 5618.2 9 3.218 39.3 1 R.EEQRLNDRGLEIVKK.Q Reverse_YLR075W 1 1 6.3% 221 25361 10.0 U RPL10 SGDID:S000004065, Chr XII from 282928-283593, Verified ORF, "Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subunits; regulates translation initiation; has similarity to rat L10 ribosomal protein and to members of the QM gene family" * FT_3a_7.04060.04060.1 1.2972 0.0956 95.7 1786.24 1787.0714 7912.0 3 2.909 38.5 1 K.KS*LIIKQQGPFKYR.A YOR373W 4 4 6.2% 851 94104 7.0 U NUD1 SGDID:S000005900, Chr XV from 1036830-1039385, Verified ORF, "Component of the spindle pole body outer plaque, required for exit from mitosis" * FT_3a_20.09041.09041.2 1.5061 0.0387 92.7 1656.0282 1657.82 3184.1 146 3.76 35.7 1 K.AYELTSTKPGDVGYR.Q * FT_3a_34.14160.14160.2 2.0766 0.1698 98.6 1784.9854 1784.0624 6057.3 3 4.71 34.4 1 K.VLNLNGNPLVSIVESSK.M * FT_3a_28.11815.11815.2 1.8058 0.1696 98.4 1411.7966 1413.5884 5338.4 20 3.878 40.9 1 K.MENGT*LRALSIK.N * FT_3a_13.06430.06430.2 1.7067 0.2423 98.9 979.563 979.1204 2203.5 1 5.213 68.8 1 K.LDGFAQLSK.W YJR002W 3 3 6.2% 593 66953 4.7 U MPP10 SGDID:S000003762, Chr X from 438779-440560, Verified ORF, "Component of the SSU processome, which is required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p" * FT_3a_22.09637.09637.4 3.2534 0.2934 100.0 2802.4104 2797.1814 5980.4 28 3.881 25.0 1 D.TLSKAKNIT*VINQKGEKKDVSGKTK.K * FT_3a_15.07172.07172.2 1.3262 0.0562 92.6 1313.7019 1314.441 5450.3 89 3.116 50.0 1 K.KDVS*GKTKKSR.S * FT_3a_10.05174.05174.1 1.1033 0.0671 92.3 1370.67 1370.4185 5780.4 11 3.027 40.9 1 K.KSRSGPDS*TNIK.L Reverse_YPL124W 1 1 5.9% 253 29280 9.5 U SPC29 SGDID:S000006045, Chr XVI from 316754-317515, Verified ORF, "Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication" * FT_3a_29.12309.12309.2 1.5413 0.0801 93.8 1791.9141 1792.7698 5830.9 142 3.033 25.0 1 K.KNGLES*TNSSFNEER.L Reverse_YDR450W 1 1 5.5% 146 17038 10.3 U RPS18A SGDID:S000002858, Chr IV from 1359913-1359959,1360395-1360788, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Bp and has similarity to E. coli S13 and rat S18 ribosomal proteins" Reverse_YML026C 1 1 5.5% 146 17038 10.3 U RPS18B SGDID:S000004488, Chr XIII from 223828-223782,223380-222987, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similarity to E. coli S13 and rat S18 ribosomal proteins" FT_3a_6.03551.03551.1 1.1969 0.069 93.7 918.2355 918.93835 4584.2 84 3.533 42.9 1 K.GDTIDNQR.N YLR167W 1 1 5.3% 152 17216 9.9 U RPS31 SGDID:S000004157, Chr XII from 498949-499407, Verified ORF, "Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B" * FT_3a_19.08367.08367.2 1.6095 0.1226 97.8 958.5498 957.1571 4243.7 8 5.164 64.3 1 K.LAVLSYYK.V YHR172W 3 3 5.2% 823 96825 6.4 U SPC97 SGDID:S000001215, Chr VIII from 448335-450806, Verified ORF, "Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque" * FT_3a_6.03735.03735.2 1.2227 0.1609 94.0 799.5327 798.9164 2377.1 1 4.226 80.0 1 R.FAYEIR.R * FT_3a_33.13800.13800.4 2.9767 0.1477 91.5 2558.5571 2552.895 4283.1 2 3.446 30.8 1 K.HLQQIFLGY*QSGHNVLKFLTK.N * FT_3a_19.08372.08372.2 1.7036 0.0582 94.2 1779.8328 1779.8567 3894.7 252 3.202 30.0 1 K.FDFYDSSSVDAAGIER.V YNL188W 1 1 5.1% 433 50653 9.3 U KAR1 SGDID:S000005132, Chr XIV from 286309-287610, Verified ORF, "Essential protein involved in karyogamy during mating and in spindle pole body duplication during mitosis, localizes to the half-bridge of the spindle pole body, interacts with Spc72p during karyogamy, also interacts with Cdc31p" * FT_3a_40.16346.16346.4 3.1121 0.3285 100.0 2634.5957 2638.6377 4722.0 335 3.986 26.2 1 G.IASRTKNINS*DSDRSNDT*IKQN.N YDR212W 2 2 5.0% 559 60481 6.5 U TCP1 SGDID:S000002620, Chr IV from 887227-888906, Verified ORF, "Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; involved in maintenance of actin cytoskeleton; homolog to Drosophila melanogaster and mouse tailless complex polypeptide" * FT_3a_50.19864.19864.1 1.2786 0.0497 93.3 815.52734 814.9627 4871.8 13 3.514 50.0 1 K.RIAGGNVK.I * FT_3a_17.07608.07608.4 2.8833 0.1789 95.5 2462.1758 2461.6738 4095.6 9 3.872 29.8 1 R.SYHAASQMAKPEDVKRRSY*R.N YNL014W 4 4 4.9% 1044 115869 6.2 U HEF3 SGDID:S000004959, Chr XIV from 606320-609454, Verified ORF, "Translational elongation factor EF-3; paralog of YEF3 and member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells" * FT_3a_13.06359.06359.2 1.5067 0.0904 94.0 1388.7184 1388.6096 5389.1 235 3.11 36.4 1 R.GLAERETSIKRK.A * FT_3a_18.08057.08057.2 1.2851 0.0408 90.9 1393.7177 1393.4955 3498.5 260 3.261 40.0 1 K.YKGNLS*EFVQK.C * FT_3a_18.08078.08078.2 2.5586 0.4115 100.0 1179.5785 1180.3049 5584.9 1 7.047 68.8 1 K.TPSEYIQWR.F * FT_3a_40.16327.16327.2 1.2317 0.0393 90.4 2223.0527 2222.6475 7184.4 287 3.412 25.0 1 K.IFKIEGTPRRVAGIHSRRK.F Reverse_YCL054W 2 2 4.9% 841 96485 8.0 U SPB1 SGDID:S000000559, Chr III from 31449-33974, Verified ORF, "AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the putative tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants" * FT_3a_21.09259.09259.4 3.4525 0.1613 95.2 3266.3538 3264.0488 5195.5 149 3.361 17.8 1 R.GALGKNRGSAVVLTVKPKTKPKKTVKRMLR.S * FT_3a_7.03999.03999.1 1.3748 0.0874 95.1 1295.8 1295.5242 6421.2 2 4.372 45.0 1 K.TIPKNIKSHEK.E Reverse_YPL255W 1 1 4.9% 385 45384 6.5 U BBP1 SGDID:S000006176, Chr XVI from 67725-68882, Verified ORF, "Protein required for the spindle pole body (SPB) duplication, localized at the central plaque periphery; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p" * FT_3a_28.11848.11848.2 1.7483 0.1449 97.8 2378.2327 2378.6433 5088.2 4 3.38 25.0 1 K.LSKYKQGLSYYNEFLT*KSK.K Reverse_YMR142C 1 1 4.5% 199 22525 11.1 U RPL13B SGDID:S000004750, Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein" * FT_3a_54.21471.21471.1 1.0031 0.1388 96.2 1004.6538 1004.12775 6756.6 6 3.687 56.2 1 K.KKEAEAEAK.E Reverse_YDR356W 5 5 4.4% 944 111782 7.1 U SPC110 SGDID:S000002764, Chr IV from 1186098-1188932, Verified ORF, "Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner" * FT_3a_35.14279.14279.2 1.3374 0.0080 91.2 1167.6794 1166.2852 5190.8 89 3.222 42.9 1 K.RT*DLRLRR.T * FT_3a_8.04433.04433.1 1.4161 0.0093 91.4 757.4572 757.9078 3386.7 3 3.337 70.0 1 R.ENLILR.E * FT_3a_12.06019.06019.1 1.2248 0.0346 90.9 760.41815 760.86505 3436.7 87 2.474 50.0 1 R.DNATIVK.Q * FT_3a_15.07064.07064.2 1.1775 0.0467 90.3 1067.6892 1067.1869 4773.0 194 3.146 43.8 1 K.GLLKS*ELAR.D * FT_3a_20.09052.09052.2 1.235 0.0276 90.1 1271.6678 1271.387 4987.0 52 3.072 45.5 1 K.LSGNPLHSAEDM.- YKR095W 6 6 4.3% 1875 218454 5.2 U MLP1 SGDID:S000001803, Chr XI from 619447-625074, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs" * FT_3a_10.05124.05124.2 1.5507 0.1651 97.2 1951.8818 1951.9923 4507.6 143 3.515 29.4 1 R.LSSITDEADEDNENLSAK.S * FT_3a_7.03929.03929.2 1.9961 0.1308 99.6 880.4405 879.81256 3265.0 1 4.357 90.0 1 K.QLT*ET*K.R * FT_3a_28.11760.11760.1 1.4223 0.1472 97.8 1041.5385 1041.1461 7080.7 7 3.795 50.0 1 K.SDIS*IKLGK.E * FT_3a_19.08473.08473.2 1.3063 0.0378 92.2 985.5542 984.18634 3238.9 218 3.289 50.0 1 K.LNQLNLLR.E * FT_3a_34.13956.13956.4 2.8561 0.1861 95.3 2710.8386 2716.7478 3728.6 219 3.816 25.0 1 K.WES*EHEQEVS*QKIREAEEALK.K * FT_3a_28.11749.11749.2 1.4201 0.0018 90.7 2400.0657 2402.613 6860.2 216 2.499 22.2 1 K.KS*FDEGKQQAMMKTT*LLER.K Reverse_YKR095W 5 5 4.2% 1875 218455 5.2 U MLP1 SGDID:S000001803, Chr XI from 619447-625074, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs" * FT_3a_42.17008.17008.2 1.5244 0.1517 96.1 2140.0527 2141.253 7343.5 22 4.195 28.1 1 K.IQS*YADT*LNIKSKELEK.R * FT_3a_10.05079.05079.2 1.5554 0.0897 95.0 1396.6685 1396.4967 6299.7 88 3.255 50.0 1 K.ELS*KVKY*QLK.E * FT_3a_26.11288.11288.2 2.8568 0.1489 96.7 1483.8096 1482.5902 8519.8 3 4.776 59.1 1 K.EKS*ELKDALNRV.V * FT_3a_29.12356.12356.2 1.5449 0.0020 92.3 2107.3018 2108.3098 6149.2 2 3.468 34.4 1 K.T*LQLEKLLDENEPTQKK.S * FT_3a_31.13098.13098.2 1.8405 0.0277 94.5 2698.2383 2699.993 5698.9 10 3.138 25.0 1 K.DNERIVNEMETKLGDIKKLS*SAK.L Reverse_YMR129W 4 4 3.8% 1337 151652 6.7 U POM152 SGDID:S000004736, Chr XIII from 527803-531816, Verified ORF, "Nuclear pore membrane glycoprotein; may be involved in duplication of nuclear pores and nuclear pore complexes during S-phase;" * FT_3a_42.17094.17094.2 1.8563 0.0678 96.4 1965.97 1967.1882 7114.6 15 3.3 34.4 1 R.GWKLDNLEGQTFSQKSK.S * FT_3a_10.05167.05167.2 1.2619 0.0516 91.7 981.5648 981.1393 3380.4 169 3.198 64.3 1 K.FDKKSLSR.L * FT_3a_23.09935.09935.1 1.2179 0.2888 98.8 864.75525 865.964 3986.2 2 4.98 50.0 1 K.KDGNIYR.D * FT_3a_44.17568.17568.2 1.9092 0.2728 99.6 2248.1345 2249.2664 7633.4 3 4.875 30.6 1 K.SDRESIRSKEDSINS*ETSK.F YDR172W 2 2 3.5% 685 76551 7.0 U SUP35 SGDID:S000002579, Chr IV from 808319-810376, Verified ORF, "Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a dominant cytoplasmically inherited protein aggregate that alters translational fidelity and creates a nonsense suppressor phenotype" * FT_3a_47.18655.18655.2 1.3341 0.116 93.4 1796.1489 1794.7803 5920.1 24 3.745 34.6 1 K.KEEEKSAET*KEPT*K.E * FT_3a_9.04692.04692.2 1.934 0.2378 100.0 1115.5933 1115.2738 6815.7 5 5.139 61.1 1 R.YTILDAPGHK.M YLR342W 4 4 3.3% 1876 214849 7.2 U FKS1 SGDID:S000004334, Chr XII from 809997-815627, Verified ORF, "Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling" * FT_3a_28.11927.11927.2 1.8949 0.0827 97.2 2090.0159 2090.315 8350.2 149 3.946 25.0 1 R.VENPEIVQMFGGNAEGLER.E * FT_3a_9.04921.04921.2 1.6986 0.09 97.8 1033.5127 1033.2335 5026.1 25 3.471 64.3 1 R.ELEKMARR.K * FT_3a_30.12614.12614.2 1.9484 0.3656 100.0 2645.2048 2646.8665 9086.8 1 5.832 29.5 1 R.AYPDLQIAYLDEEPPLTEGEEPR.I * FT_3a_15.07180.07180.2 1.8273 0.1652 98.3 1478.7327 1478.6067 5277.4 23 3.593 40.9 1 K.SDNQNHALIFYR.G Reverse_YOR272W 1 1 3.0% 460 51359 7.0 U YTM1 SGDID:S000005798, Chr XV from 832810-834192, Verified ORF, "Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit" * FT_3a_11.05710.05710.1 1.2389 0.1973 97.6 1591.1228 1591.8497 8521.3 6 4.606 26.9 1 K.EAWKVAFVKDNVGK.Q YOR272W 1 1 2.8% 460 51359 7.0 U YTM1 SGDID:S000005798, Chr XV from 832810-834192, Verified ORF, "Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit" * FT_3a_44.17822.17822.2 1.636 0.047 94.1 1634.0593 1631.9829 6028.4 60 3.281 37.5 1 K.RRKLTMKDGTIRR.R Reverse_YIL149C 4 4 2.7% 1679 195140 6.0 U MLP2 SGDID:S000001411, Chr IX from 68067-63028, reverse complement, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length" * FT_3a_12.05817.05817.2 1.6195 0.1047 97.2 1080.4836 1080.1423 5111.5 3 3.726 57.1 1 R.EES*PLRIR.K * FT_3a_29.12101.12101.2 1.6692 0.1778 98.1 1532.8999 1532.5781 5424.7 3 3.769 40.9 1 K.MET*DDITNQAWK.L * FT_3a_35.14247.14247.1 1.3013 0.0446 92.3 1649.6967 1649.7147 2747.0 38 3.363 33.3 1 K.IKIRS*QSLET*SAR.E * FT_3a_27.11571.11571.2 1.5121 0.0411 92.9 1471.8601 1472.4186 5046.0 4 2.98 50.0 1 K.SFEAKEVS*AT*DK.L YCL054W 1 1 2.7% 841 96485 8.0 U SPB1 SGDID:S000000559, Chr III from 31449-33974, Verified ORF, "AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the putative tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants" * FT_3a_44.17759.17759.4 3.0411 0.2573 96.4 3031.8386 3027.2827 4865.6 11 3.954 27.3 1 K.T*QKKNS*KGRLDRYYYLAKEKGYR.A Reverse_YBR133C 1 1 2.7% 827 95153 6.4 U HSL7 SGDID:S000000337, Chr II from 504281-501798, reverse complement, Verified ORF, "Protein arginine N-methyltransferase that exhibits septin and Hsl1p-dependent bud neck localization and periodic Hsl1p-dependent phosphorylation; required along with Hsl1p for bud neck recruitment, phosphorylation, and degradation of Swe1p" * FT_3a_35.14481.14481.2 1.3545 0.0223 90.7 2299.573 2297.6658 8388.7 27 2.907 23.8 1 R.DVLPGRGAGAVLIVLPRKAS*AR.P Reverse_YMR186W 1 1 2.7% 705 80900 4.8 U HSC82 SGDID:S000004798, Chr XIII from 632354-634471, Verified ORF, "Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels that HSP82 and induced 2-3 fold by heat shock" * FT_3a_50.19965.19965.2 1.2385 0.0916 92.1 2329.3528 2329.4287 7778.2 158 3.811 22.2 1 K.PSIEFT*KKSSMYSSMS*SDR.L Reverse_YGL173C 3 3 2.4% 1528 175459 7.5 U KEM1 SGDID:S000003141, Chr VII from 180119-175533, reverse complement, Verified ORF, "5'-3' exonuclease involved in mRNA decay, evolutionarily conserved component of cytoplasmic processing (P) bodies, plays a role in microtubule-mediated processes, filamentous growth, and ribosomal RNA maturation" * FT_3a_57.22463.22463.1 1.314 0.1176 96.8 1165.8395 1165.3372 7613.2 69 4.029 38.9 1 K.QSRLLAFSSR.P * FT_3a_15.07193.07193.2 1.8181 0.0738 97.0 1415.6543 1413.6716 4833.4 157 3.128 33.3 1 K.GTADTIMFKSTIK.S * FT_3a_17.07708.07708.2 1.4368 0.1204 93.9 1709.844 1710.1221 4998.6 22 3.379 34.6 1 K.KQQKVLLKKGVRQR.K Reverse_YDR212W 1 1 2.3% 559 60481 6.5 U TCP1 SGDID:S000002620, Chr IV from 887227-888906, Verified ORF, "Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; involved in maintenance of actin cytoskeleton; homolog to Drosophila melanogaster and mouse tailless complex polypeptide" * FT_3a_33.13617.13617.2 1.3992 0.1675 95.5 1411.9177 1409.5792 3530.9 9 3.63 41.7 1 K.TT*LVVQAGADIIK.K Reverse_YNL188W 1 1 2.3% 433 50653 9.3 U KAR1 SGDID:S000005132, Chr XIV from 286309-287610, Verified ORF, "Essential protein involved in karyogamy during mating and in spindle pole body duplication during mitosis, localizes to the half-bridge of the spindle pole body, interacts with Spc72p during karyogamy, also interacts with Cdc31p" * FT_3a_27.11320.11320.2 1.4106 0.0058 91.4 1397.8107 1397.4954 5585.9 42 2.753 44.4 1 K.HFRPKNT*NFR.N Reverse_YGL008C 1 1 2.2% 918 99619 5.1 U PMA1 SGDID:S000002976, Chr VII from 482671-479915, reverse complement, Verified ORF, "Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plasma membrane potential; part of the P2 subgroup of cation-transporting ATPases" * FT_3a_22.09626.09626.2 1.3367 0.0873 92.4 2370.145 2372.7698 7739.8 16 2.587 26.3 1 K.PY*QKLSKLFAKDIADLGKKK.R YGL173C 2 2 1.9% 1528 175459 7.5 U KEM1 SGDID:S000003141, Chr VII from 180119-175533, reverse complement, Verified ORF, "5'-3' exonuclease involved in mRNA decay, evolutionarily conserved component of cytoplasmic processing (P) bodies, plays a role in microtubule-mediated processes, filamentous growth, and ribosomal RNA maturation" * FT_3a_18.08128.08128.2 1.6339 0.0039 92.9 1453.623 1452.6738 5252.5 90 2.576 45.5 1 R.ARRFRTAMDAEK.A * FT_3a_26.11218.11218.2 1.5293 0.0965 93.9 2088.2302 2086.2717 5857.7 44 3.595 31.2 1 K.VPREAVLNPRS*S*FALLR.S Reverse_YOR373W 2 2 1.8% 851 94104 7.0 U NUD1 SGDID:S000005900, Chr XV from 1036830-1039385, Verified ORF, "Component of the spindle pole body outer plaque, required for exit from mitosis" * FT_3a_8.04335.04335.2 1.5338 0.0809 95.3 857.48566 856.0449 1808.4 244 3.801 58.3 1 R.QMGFMNK.L * FT_3a_18.08345.08345.1 1.4046 0.0536 94.2 952.51013 952.052 3781.2 14 3.38 57.1 1 K.KDLIS*PAK.G Reverse_YDR385W 1 1 1.7% 842 93289 6.3 U EFT2 SGDID:S000002793, Chr IV from 1243220-1245748, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin" Reverse_YOR133W 1 1 1.7% 842 93289 6.3 U EFT1 SGDID:S000005659, Chr XV from 575098-577626, Verified ORF, "Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin" FT_3a_41.16639.16639.2 1.4639 0.1218 94.2 1817.3116 1814.8843 6660.8 27 3.149 30.8 1 K.S*VY*LMLDAKPDCNK.I Reverse_YNL126W 1 1 1.4% 846 98227 7.5 U SPC98 SGDID:S000005070, Chr XIV from 387229-389769, Verified ORF, "Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque" * FT_3a_26.11180.11180.2 1.4861 0.0672 93.3 1610.8776 1610.7228 4333.9 14 2.999 36.4 1 R.Y*SNSQYLVHYKK.S Reverse_YJR053W 1 1 1.4% 574 66087 5.9 U BFA1 SGDID:S000003814, Chr X from 533941-535665, Verified ORF, "Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis" * FT_3a_25.10635.10635.2 1.2593 0.0397 90.9 1093.3746 1095.0857 3881.5 32 3.423 64.3 1 K.T*S*NIVMNR.I Reverse_YHR172W 1 1 1.3% 823 96825 6.4 U SPC97 SGDID:S000001215, Chr VIII from 448335-450806, Verified ORF, "Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque" * FT_3a_35.14332.14332.2 1.4263 0.0698 93.1 1545.7928 1543.6389 6025.0 72 3.097 40.0 1 K.GY*RVIRRSFT*K.F YBR133C 1 1 1.3% 827 95153 6.4 U HSL7 SGDID:S000000337, Chr II from 504281-501798, reverse complement, Verified ORF, "Protein arginine N-methyltransferase that exhibits septin and Hsl1p-dependent bud neck localization and periodic Hsl1p-dependent phosphorylation; required along with Hsl1p for bud neck recruitment, phosphorylation, and degradation of Swe1p" * FT_3a_21.09353.09353.2 1.8042 0.3051 97.1 1331.8295 1331.52 5275.0 3 4.715 55.0 1 L.QDICIPPFNVK.K Reverse_YJR002W 1 1 1.2% 593 66953 4.7 U MPP10 SGDID:S000003762, Chr X from 438779-440560, Verified ORF, "Component of the SSU processome, which is required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p" * FT_3a_55.21745.21745.1 1.0977 0.0481 90.4 798.42224 798.95734 4472.0 52 3.409 50.0 1 K.VPEKTPK.D Reverse_YNL014W 1 1 1.1% 1044 115868 6.2 U HEF3 SGDID:S000004959, Chr XIV from 606320-609454, Verified ORF, "Translational elongation factor EF-3; paralog of YEF3 and member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells" * FT_3a_8.04326.04326.1 1.3682 0.1521 97.1 1139.3572 1140.3678 4101.3 19 4.211 40.9 1 K.VAVPNVASAIAK.L YMR129W 1 1 1.0% 1337 151652 6.7 U POM152 SGDID:S000004736, Chr XIII from 527803-531816, Verified ORF, "Nuclear pore membrane glycoprotein; may be involved in duplication of nuclear pores and nuclear pore complexes during S-phase;" * FT_3a_24.10316.10316.1 1.5497 0.1324 97.2 1614.8099 1615.7363 9202.5 1 4.285 46.2 1 K.EGNYEIVFDTVSNK.L Proteins Peptide IDs Spectra Unfiltered 136 24768 28394 Filtered 73 484 529 Forward matches 45 433 478 Decoy matches 28 51 51 Forward FP rate 62.22 11.78 10.67 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0