DTASelect v2.0.16 /data/1/catclw/Projects/Jamie /garibaldi/people-b/applications/yates/dbase/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta SEQUEST 3.0 in SQT format. -p 1 --fp 0.1 --modstat --sp --noxc --nodcn --extra -e con true Use criteria 0.0 Minimum peptide confidence 0.1 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 16 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement false Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling con Exclude protein names matching 0 Minimum modified peptides per locus 1000 Minimum redundancy for low coverage loci 1 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence YIL002W-A 10 12 98.6% 69 7729 4.7 U YIL002W-A SGDID:S000028835, Chr IX from 350298-350507, Uncharacterized ORF, "Identified by expression profiling and mass spectrometry" * Jamie_phos_01_itms_6.04434.04434.2 4.4595 0.2929 100.0 1448.0122 1448.5297 7895.2 1 6.992 76.9 1 M.TRDTPEDVSTAGAK.D * Jamie_phos_01_itms_29.12617.12617.2 3.346 0.3036 97.0 2197.7322 2197.3176 7034.6 1 5.675 47.4 1 M.TRDT*PEDVSTAGAKDILDVL.N * Jamie_phos_01_itms_42.17482.17482.2 2.8612 0.2575 96.9 2584.892 2585.9146 8555.0 1 4.684 34.8 1 M.TRDTPEDVSTAGAKDILDVLNLLK.G * Jamie_phos_01_itms_42.17559.17559.3 4.6469 0.3524 100.0 2585.7844 2585.9146 8375.2 1 5.496 39.1 2 M.TRDTPEDVSTAGAKDILDVLNLLK.G * Jamie_phos_01_itms_41.17181.17181.4 6.5652 0.4347 100.0 3086.5764 3086.4233 8916.3 1 7.874 29.8 2 M.TRDTPEDVSTAGAKDILDVLNLLKGGEEK.I * Jamie_phos_01_itms_53.21561.21561.4 4.529 0.274 100.0 4758.0166 4759.378 8624.3 4 5.441 15.1 1 M.TRDTPEDVSTAGAKDILDVLNLLKGGEEKISEVELKLDEMEKK.M * Jamie_phos_01_itms_45.18682.18682.2 2.7604 0.191 90.1 2329.672 2328.622 6903.8 82 4.297 31.0 1 R.DTPEDVSTAGAKDILDVLNLLK.G * Jamie_phos_01_itms_15.07602.07602.2 3.4763 0.211 100.0 1564.3722 1563.8036 6419.1 1 5.529 70.8 1 K.ISEVELKLDEMEK.K * Jamie_phos_01_itms_14.07351.07351.2 2.8243 0.359 100.0 1690.3322 1691.9777 7290.5 1 5.984 65.4 1 K.ISEVELKLDEMEKK.M * Jamie_phos_01_itms_25.11452.11452.3 3.853 0.2584 93.5 2858.5444 2858.1528 10228.5 42 4.659 26.0 1 K.MDSLLVQLEDLHRDNNDLAKSSSQK.- YBR109C 5 5 60.5% 147 16135 4.3 U CMD1 SGDID:S000000313, Chr II from 458356-457913, reverse complement, Verified ORF, "Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca++ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin" * Jamie_phos_01_itms_48.19545.19545.3 5.4592 0.4057 100.0 4110.2344 4109.526 6817.2 1 7.285 27.1 1 R.SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR.Q * Jamie_phos_01_itms_10.05821.05821.2 3.121 0.2699 99.3 1761.7122 1760.8986 7066.4 1 4.972 60.7 1 S.RQLKSNDSEQELLEA.F * Jamie_phos_01_itms_21.10003.10003.2 4.0072 0.3397 100.0 1510.4922 1510.5975 8764.1 1 6.517 70.8 1 K.SNDSEQELLEAFK.V * Jamie_phos_01_itms_38.16155.16155.3 3.6318 0.2858 98.7 3371.3044 3368.651 8708.6 1 5.138 28.3 1 T.SIGEKLTDAEVDDMLREVSDGSGEINIQQFA.A * Jamie_phos_01_itms_45.18507.18507.3 5.4176 0.4282 100.0 3366.1443 3366.7217 8395.9 1 8.075 25.0 1 K.LTDAEVDDMLREVSDGSGEINIQQFAALLSK.- YKL042W 34 48 59.5% 363 42271 7.9 U SPC42 SGDID:S000001525, Chr XI from 358119-359210, Verified ORF, "Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane" * Jamie_phos_01_itms_22.10033.10033.2 4.4076 0.2404 100.0 2531.7322 2528.7546 4527.6 1 5.718 52.6 2 R.LYDDYYNIPYQYSNPTPMNR.D * Jamie_phos_01_itms_23.10655.10655.2 3.6571 0.3241 100.0 2607.872 2608.7546 6616.7 1 6.751 50.0 1 R.LYDDYYNIPYQYSNPT*PMNR.D * Jamie_phos_01_itms_24.10791.10791.2 3.9397 0.3419 94.1 2608.4321 2608.7546 5219.8 1 5.27 50.0 1 R.LYDDYYNIPYQYS*NPTPMNR.D * Jamie_phos_01_itms_23.10755.10755.3 3.8061 0.2511 97.8 3549.0244 3548.8213 3820.4 1 4.853 28.6 1 R.LYDDYYNIPYQYSNPTPMNRDYNDVGSRI.N * Jamie_phos_01_itms_4.03347.03347.2 2.0487 0.2259 97.4 927.1122 925.93036 5785.1 4 4.72 71.4 2 R.DYNDVGSR.I * Jamie_phos_01_itms_9.05505.05505.2 2.6834 0.2119 99.3 1039.1322 1039.0898 4771.2 1 4.975 81.2 1 R.DYNDVGSRI.N * Jamie_phos_01_itms_11.06035.06035.3 3.6122 0.2938 100.0 1575.5343 1575.8052 6336.2 1 5.464 54.2 2 R.INADKLVPEEYKR.N * Jamie_phos_01_itms_11.06094.06094.2 3.7986 0.2851 100.0 1575.6122 1575.8052 5019.1 1 5.438 83.3 3 R.INADKLVPEEYKR.N * Jamie_phos_01_itms_8.05135.05135.2 3.1475 0.2155 95.4 1462.2722 1462.6458 6213.3 1 4.562 77.3 1 I.NADKLVPEEYKR.N * Jamie_phos_01_itms_17.08429.08429.2 5.1075 0.4922 100.0 2079.672 2080.2275 7986.5 1 8.38 67.6 1 K.VKDPMVDDDPVSENYDQI.N * Jamie_phos_01_itms_15.07762.07762.2 3.3694 0.281 100.0 2517.172 2518.7546 9295.8 2 5.682 45.2 1 K.VKDPMVDDDPVSENYDQINVPK.H * Jamie_phos_01_itms_16.07839.07839.3 5.4746 0.3216 100.0 2519.7544 2518.7546 5014.9 1 6.207 40.5 1 K.VKDPMVDDDPVSENYDQINVPK.H * Jamie_phos_01_itms_6.04323.04323.2 2.6107 0.3204 100.0 1192.6721 1192.2797 5456.0 3 6.093 70.0 2 K.HRAPDATGNPR.T * Jamie_phos_01_itms_1.00137.00137.2 3.9885 0.3813 100.0 1552.9521 1553.5828 6472.7 1 7.221 80.8 3 R.TTNKVSNTSDQDSR.L * Jamie_phos_01_itms_21.09819.09819.2 2.7435 0.3619 100.0 1297.2722 1297.5554 8671.8 3 6.692 75.0 1 R.TLSVLTNYVMR.S * Jamie_phos_01_itms_31.13566.13566.2 2.8096 0.3755 100.0 1377.2522 1377.5554 6223.6 1 6.188 75.0 1 R.TLS*VLTNYVMR.S * Jamie_phos_01_itms_29.12891.12891.3 5.2 0.3228 96.6 2845.6143 2846.058 6662.8 1 6.036 37.5 1 R.SEDGNNDRMS*PLPSPLNTILPINNR.L * Jamie_phos_01_itms_32.13677.13677.3 3.9882 0.2928 98.0 2846.9944 2846.058 7202.4 3 5.421 32.3 1 R.SEDGNNDRMSPLPS*PLNTILPINNR.L * Jamie_phos_01_itms_33.14307.14307.3 4.4897 0.32 97.0 2926.8843 2926.058 7314.2 1 5.875 35.4 3 R.SEDGNNDRMS*PLPS*PLNTILPINNR.L * Jamie_phos_01_itms_23.10494.10494.2 2.8305 0.2868 97.6 2039.6322 2038.1624 5920.2 1 5.389 43.8 1 K.VNPS*DDDIMMYESAELK.R * Jamie_phos_01_itms_32.13944.13944.3 5.3412 0.3561 100.0 3195.6243 3192.5837 8966.3 1 6.489 35.2 1 R.KLSLNNQLQELQSMMDGDDNIKLDNVSK.H * Jamie_phos_01_itms_33.14163.14163.3 6.3642 0.4128 100.0 3271.8542 3272.5837 3798.2 1 7.409 39.8 2 R.KLS*LNNQLQELQSMMDGDDNIKLDNVSK.H * Jamie_phos_01_itms_30.13233.13233.3 3.6178 0.2693 100.0 2952.0544 2951.2502 9383.0 60 5.404 25.0 1 L.SLNNQLQELQSMMDGDDNIKLDNVSK.H * Jamie_phos_01_itms_10.05745.05745.3 5.6244 0.0341 97.5 3104.7244 3104.0266 5388.2 11 5.606 28.0 1 R.HSS*QSSRDYSPSSDACLECSNDLYEK.N * Jamie_phos_01_itms_11.06177.06177.3 4.0463 0.2388 100.0 3294.0544 3294.3179 6311.9 1 5.346 30.6 2 R.HSSQSSRDYSPSSDACLECSNDLYEKNR.V * Jamie_phos_01_itms_12.06669.06669.2 4.6903 0.3533 100.0 2255.872 2254.2546 5986.9 1 6.708 66.7 2 R.DYSPSSDACLECSNDLYEK.N * Jamie_phos_01_itms_16.07965.07965.2 2.7543 0.2896 97.7 2334.2122 2334.2546 6766.9 1 5.364 52.8 1 R.DY*SPSSDACLECSNDLYEK.N * Jamie_phos_01_itms_14.07425.07425.2 4.9263 0.5036 100.0 2334.5322 2334.2546 7290.8 1 7.489 61.1 1 R.DYS*PSSDACLECSNDLYEK.N * Jamie_phos_01_itms_17.08325.08325.2 4.6933 0.113 100.0 2413.4922 2414.2546 6195.4 1 6.932 61.1 1 R.DYS*PSS*DACLECSNDLYEK.N * Jamie_phos_01_itms_17.08339.08339.2 5.6999 0.1001 100.0 2416.7122 2414.2546 6070.5 1 6.565 66.7 1 R.DY*SPSS*DACLECSNDLYEK.N * Jamie_phos_01_itms_8.05105.05105.2 3.0295 0.3166 100.0 1973.7122 1975.0083 6735.1 1 5.732 50.0 1 S.SDACLECSNDLYEKNR.V * Jamie_phos_01_itms_9.05595.05595.3 3.3395 0.2278 98.6 2419.5842 2418.6465 8978.9 34 5.186 26.2 1 K.NRVKPENNMSETFATPTPNNR.- * Jamie_phos_01_itms_9.05301.05301.2 4.8838 0.46 100.0 2147.7722 2148.355 7858.8 1 8.269 63.9 2 R.VKPENNMSETFATPTPNNR.- * Jamie_phos_01_itms_9.05326.05326.3 3.8606 0.247 96.3 2228.4844 2228.355 6827.9 1 5.252 41.7 1 R.VKPENNMSETFAT*PTPNNR.- YOR257W 4 5 44.1% 161 18751 4.6 U CDC31 SGDID:S000005783, Chr XV from 811006-811491, Verified ORF, "Component of the spindle pole body (SPB) half-bridge, required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; interacts with Kar1p" * Jamie_phos_01_itms_46.18783.18783.4 4.993 0.3846 100.0 4780.9766 4781.215 4132.7 1 5.374 17.1 1 R.SSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELK.V * Jamie_phos_01_itms_28.12340.12340.2 4.3826 0.4751 100.0 1667.6322 1667.7667 7341.2 1 8.51 80.8 1 R.EILDLIDEYDSEGR.H * Jamie_phos_01_itms_15.07489.07489.2 3.2426 0.1892 98.9 1776.3722 1774.9658 8789.5 1 4.917 60.0 2 R.VAKELGETLTDEELRA.M * Jamie_phos_01_itms_13.06840.06840.2 3.7449 0.3205 100.0 1406.1522 1405.5016 5742.1 1 6.249 81.8 1 K.ELGETLTDEELR.A YPL124W 12 13 43.5% 253 29280 9.5 U SPC29 SGDID:S000006045, Chr XVI from 316754-317515, Verified ORF, "Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication" * Jamie_phos_01_itms_8.05097.05097.2 4.0078 0.3603 100.0 1905.4722 1905.9298 3305.6 2 6.293 66.7 1 K.LREENFSSNT*SELGNK.K * Jamie_phos_01_itms_17.08422.08422.3 3.4246 0.2989 98.6 2800.4343 2801.152 7062.0 330 5.207 25.0 1 R.QLREGNTRLPPPPFSSYGMPPTNRS.N * Jamie_phos_01_itms_13.06772.06772.2 2.8582 0.2585 100.0 1312.4122 1312.4679 5170.5 4 5.615 63.6 1 R.EGNTRLPPPPFS.S * Jamie_phos_01_itms_7.04810.04810.2 3.3857 0.4269 100.0 1504.4122 1504.5535 4308.1 1 6.233 66.7 1 R.TS*SPVRTDKFASQ.N * Jamie_phos_01_itms_18.08572.08572.2 5.1039 0.4454 100.0 1694.4521 1694.8821 7522.8 1 8.58 75.0 1 R.IVYDQGTVIDNLTSR.I * Jamie_phos_01_itms_27.12006.12006.2 4.269 0.4411 100.0 1808.3121 1808.0416 8116.6 1 7.742 66.7 1 R.IVYDQGTVIDNLTSRI.T * Jamie_phos_01_itms_22.10117.10117.2 3.4804 0.3731 100.0 1908.4922 1908.1537 9272.8 1 6.339 53.3 1 T.YGLQMGGLYENDMPYR.R * Jamie_phos_01_itms_12.06567.06567.2 4.358 0.3013 100.0 1923.7922 1923.9855 6535.9 1 6.379 60.0 2 R.SSQIHIENEST*EDILK.I * Jamie_phos_01_itms_20.09519.09519.2 4.638 0.3483 100.0 2037.6122 2037.1449 5723.7 2 6.858 65.6 1 R.SSQIHIENEST*EDILKI.L * Jamie_phos_01_itms_28.12490.12490.2 4.3389 0.2966 97.3 2151.7922 2150.3042 6218.0 2 5.546 52.9 1 R.SSQIHIENES*TEDILKIL.S * Jamie_phos_01_itms_29.12869.12869.2 3.1659 0.2443 94.2 2323.4722 2324.4607 8050.5 1 5.261 52.6 1 R.SSQIHIENEST*EDILKILSS.S * Jamie_phos_01_itms_33.14110.14110.3 5.2718 0.3636 94.1 2810.8743 2809.9604 5640.7 1 6.398 40.2 1 R.SSQIHIENES*TEDILKILSSSFHN.- YDL130W 3 3 40.6% 106 10668 4.0 U RPP1B SGDID:S000002288, Chr IV from 229906-230019,230321-230527, Verified ORF, "Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of translational elongation factors with ribosome; accumulation is regulated by phosphorylation and interaction with the P2 stalk component" * Jamie_phos_01_itms_18.08776.08776.2 3.2317 0.2655 100.0 1396.0922 1394.5266 7182.9 1 6.024 77.3 1 A.NVDNVWADVYAK.A * Jamie_phos_01_itms_31.13501.13501.2 3.9205 0.3658 100.0 3257.7922 3258.1855 7263.1 1 5.919 31.7 1 A.AAAGGDAAAEEEKEEEAAEES*DDDMGFGLFD.- * Jamie_phos_01_itms_32.13684.13684.2 3.3767 0.3595 100.0 3045.9521 3044.9492 8941.5 1 6.32 29.6 1 A.GGDAAAEEEKEEEAAEES*DDDMGFGLFD.- YIL149C 58 68 38.2% 1679 195140 6.0 U MLP2 SGDID:S000001411, Chr IX from 68067-63028, reverse complement, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length" * Jamie_phos_01_itms_19.09064.09064.2 3.7608 0.4237 100.0 1714.2722 1714.9158 9120.9 1 6.771 69.2 1 L.NVLVDEIKSQYYSR.I * Jamie_phos_01_itms_8.04887.04887.2 4.7187 0.3624 100.0 1819.5521 1819.8363 6161.0 1 7.31 76.7 1 R.DQGNDSLNDDLNKENK.L * Jamie_phos_01_itms_17.08244.08244.2 3.0461 0.2244 98.3 1405.6522 1405.7137 9044.3 2 4.852 70.0 1 R.KLMEMENILQR.C * Jamie_phos_01_itms_8.05176.05176.2 2.4876 0.4133 100.0 1747.0922 1747.8564 2902.4 35 6.135 60.7 1 K.NLKDTAS*VEKAEFSK.E * Jamie_phos_01_itms_10.05764.05764.2 2.8918 0.1383 96.9 1537.6721 1537.6764 8150.0 33 4.673 54.2 1 R.SQLTSLEKDCSLR.A * Jamie_phos_01_itms_20.09309.09309.3 5.3383 0.3772 100.0 2601.8342 2601.666 7618.0 1 6.939 40.5 2 K.NDDNSCRNPEHTDVIDELIDTK.L * Jamie_phos_01_itms_16.07890.07890.2 4.2005 0.4591 100.0 2202.5122 2202.4197 5914.7 1 7.67 58.3 1 R.LQNIVMDCTKEEEATMTTS.A * Jamie_phos_01_itms_22.10197.10197.3 3.0897 0.3138 100.0 1503.8644 1503.8717 6082.6 1 5.514 47.9 1 T.VGKLFSDIKVLKR.Q * Jamie_phos_01_itms_47.19163.19163.3 3.9854 0.3211 100.0 3069.2944 3069.4846 10429.7 1 5.592 29.2 1 R.NQKFQLQNQLEDFILELEHKTPELI.S * Jamie_phos_01_itms_48.19601.19601.4 5.4632 0.3274 100.0 3061.3765 3061.5046 6954.7 1 6.659 32.6 2 K.FQLQNQLEDFILELEHKTPELISFK.E * Jamie_phos_01_itms_9.05489.05489.2 2.2377 0.1069 93.5 1241.3121 1241.4331 5283.2 19 4.474 61.1 1 R.TKSLEHELKR.S * Jamie_phos_01_itms_17.08273.08273.2 3.7366 0.3818 100.0 1322.0122 1321.5107 9194.4 1 7.232 77.3 1 R.STELLETVSLTK.R * Jamie_phos_01_itms_16.08025.08025.2 4.1525 0.3606 100.0 2101.3123 2100.377 8943.6 1 6.787 47.2 1 S.AIQETASPLSQDELISLRK.I * Jamie_phos_01_itms_15.07776.07776.2 4.8549 0.2563 100.0 2249.2122 2246.4363 8834.8 1 5.704 57.9 2 K.ILESSNIVNENDSQAIITER.L * Jamie_phos_01_itms_14.07241.07241.2 3.446 0.3903 100.0 1548.7722 1549.721 6904.1 1 7.378 79.2 1 R.LVEFSNVNELQEK.N * Jamie_phos_01_itms_10.05931.05931.2 3.9593 0.2534 100.0 1765.5122 1764.9731 7531.2 1 5.406 60.7 1 R.ILADKLENYEGKQDK.T * Jamie_phos_01_itms_18.08793.08793.2 4.2414 0.3004 100.0 1343.4722 1343.5199 8006.3 3 6.223 77.3 1 K.DAIIELENINAK.M * Jamie_phos_01_itms_18.08789.08789.2 2.5609 0.2729 98.6 1244.3322 1244.3434 7379.4 1 4.874 77.8 1 K.TTLEDFENFK.G * Jamie_phos_01_itms_20.09571.09571.2 2.9669 0.2497 99.0 1614.5922 1613.8076 5987.1 2 4.882 57.7 1 K.TTLEDFENFKGLAK.E * Jamie_phos_01_itms_6.04356.04356.2 3.5412 0.2263 100.0 1428.3322 1428.5419 6283.0 1 5.242 77.3 1 R.LKESEISHNENK.M * Jamie_phos_01_itms_25.11405.11405.2 2.8637 0.3 100.0 1759.6522 1759.9976 9417.6 6 5.588 46.4 2 R.LRSDLQSKIQEIESI.R * Jamie_phos_01_itms_21.09832.09832.2 2.0567 0.2049 93.3 1647.7522 1646.8381 4037.9 200 4.443 46.2 1 R.SDLQSKIQEIESIR.S * Jamie_phos_01_itms_17.08469.08469.2 3.6353 0.2149 100.0 1705.8722 1706.931 8653.7 2 5.845 57.1 1 K.SLLTELSNKETTIEK.L * Jamie_phos_01_itms_25.11412.11412.2 3.2869 0.2427 100.0 1820.8722 1820.0905 6499.6 1 5.774 53.3 1 K.SLLTELSNKETTIEKL.S * Jamie_phos_01_itms_10.05608.05608.2 3.0127 0.2456 100.0 1148.2322 1148.2554 6926.0 1 5.355 88.9 1 K.LSSEIENLDK.E * Jamie_phos_01_itms_16.07876.07876.2 3.9103 0.3599 100.0 1807.5922 1807.9548 8348.8 1 6.554 53.3 1 K.FLDQNSDASTLEPTLR.K * Jamie_phos_01_itms_39.16571.16571.2 3.5362 0.3846 100.0 2694.9922 2693.9243 7353.0 1 6.925 32.6 1 K.DANSQIQAYEEIISSNENALIELK.N * Jamie_phos_01_itms_12.06576.06576.2 2.9605 0.2217 98.3 1614.3922 1614.8418 7551.8 3 4.824 53.8 1 K.LKEGALHFVQQSEK.L * Jamie_phos_01_itms_7.04770.04770.2 2.9836 0.3092 100.0 1591.6522 1592.7095 6563.9 3 6.609 57.7 1 R.LEKDAADCQAELTK.T * Jamie_phos_01_itms_7.04771.04771.2 3.0937 0.3751 100.0 1221.6122 1222.2604 8413.5 1 7.28 80.0 1 K.DAADCQAELTK.T * Jamie_phos_01_itms_13.06967.06967.2 2.949 0.2898 100.0 1761.6122 1762.917 7709.7 22 5.959 46.4 1 K.SSLYSAQDLLDKHER.K * Jamie_phos_01_itms_16.07845.07845.2 3.2404 0.3045 100.0 1532.4122 1532.6909 8487.4 1 6.22 79.2 1 R.ELISNIEQTESLR.V * Jamie_phos_01_itms_7.04775.04775.2 2.7331 0.2667 100.0 1373.5322 1373.4254 4000.4 36 5.264 60.0 1 T.QTLSEKEYQCS.A * Jamie_phos_01_itms_10.05712.05712.2 3.2297 0.2395 96.0 1398.4521 1398.6456 7597.5 1 4.638 81.8 1 V.NILKENNAILQK.S * Jamie_phos_01_itms_10.05854.05854.2 2.5254 0.2712 96.8 1813.2522 1814.0297 8230.0 12 4.706 46.2 1 K.ILVYESEMEQCKQR.Y * Jamie_phos_01_itms_5.03862.03862.2 2.5136 0.1531 98.4 1138.2522 1138.2224 5339.9 1 4.814 81.2 1 R.YQDLSQQQK.D * Jamie_phos_01_itms_7.04816.04816.2 4.6207 0.385 100.0 1476.4321 1476.54 8903.9 1 7.428 76.9 1 K.LSSAENANADLENK.F * Jamie_phos_01_itms_11.05999.05999.2 4.0523 0.3566 100.0 1587.3922 1587.7294 6951.3 1 6.69 79.2 1 K.DKLEQDLHFENAK.V * Jamie_phos_01_itms_5.03515.03515.2 2.4797 0.2777 100.0 1156.5721 1157.1791 9419.4 1 5.213 75.0 1 K.TANSSSDAFEK.L * Jamie_phos_01_itms_10.05848.05848.2 2.8326 0.2878 99.6 1787.2922 1788.9031 7160.4 1 5.125 50.0 1 K.STSSEAEYSKDIETLK.K * Jamie_phos_01_itms_10.05778.05778.2 3.4056 0.3084 100.0 1365.3922 1365.4857 7192.6 1 6.302 83.3 1 K.RKEELEEEFR.K * Jamie_phos_01_itms_22.10294.10294.3 5.1552 0.3406 94.4 3348.3245 3347.487 3714.1 1 6.384 30.2 2 K.LKENAGSLTFLDNKGS*GEDAEEELWNSPSK.G * Jamie_phos_01_itms_21.09881.09881.3 5.7416 0.2826 96.4 3351.3843 3347.487 4965.8 1 6.201 29.3 1 K.LKENAGSLTFLDNKGSGEDAEEELWNS*PSK.G * Jamie_phos_01_itms_25.11307.11307.4 6.1371 0.4032 93.8 5003.8164 5004.3057 3952.7 306 6.404 15.6 4 K.LKENAGSLTFLDNKGSGEDAEEELWNS*PSKGNSERPSAVAGFINQK.N * Jamie_phos_01_itms_25.11205.11205.4 4.5172 0.3557 98.0 5085.0166 5084.3057 2764.6 7 5.366 18.5 1 K.LKENAGSLTFLDNKGS*GEDAEEELWNS*PSKGNSERPSAVAGFINQK.N * Jamie_phos_01_itms_24.11083.11083.3 4.5066 0.3453 97.2 3107.0344 3106.1536 10120.7 5 5.696 23.1 1 K.ENAGSLTFLDNKGS*GEDAEEELWNSPSK.G * Jamie_phos_01_itms_24.10995.10995.4 5.5011 0.3047 97.3 4762.5767 4762.972 4066.8 66 5.684 18.6 1 K.ENAGSLTFLDNKGSGEDAEEELWNS*PSKGNSERPSAVAGFINQK.N * Jamie_phos_01_itms_13.06921.06921.3 3.3942 0.3145 98.1 3159.3245 3161.1926 4037.3 5 5.305 26.9 1 T.FLDNKGSGEDAEEELWNS*PSKGNSERPS.A * Jamie_phos_01_itms_16.07818.07818.3 5.5904 0.2659 98.0 3334.4644 3331.4038 6202.6 1 5.336 31.9 3 T.FLDNKGSGEDAEEELWNS*PSKGNSERPSAV.A * Jamie_phos_01_itms_15.07641.07641.3 4.6072 0.3882 90.9 3401.3943 3402.4827 3752.7 1 6.625 29.2 1 T.FLDNKGSGEDAEEELWNS*PSKGNSERPSAVA.G * Jamie_phos_01_itms_13.07005.07005.2 4.8115 0.2141 90.7 1818.1721 1815.7582 7789.0 2 5.219 60.0 1 K.GSGEDAEEELWNSPS*K.G * Jamie_phos_01_itms_18.08835.08835.3 4.7327 0.3143 97.6 3471.8943 3472.5767 3314.0 1 5.571 31.5 1 K.GSGEDAEEELWNSPS*KGNSERPSAVAGFINQK.N * Jamie_phos_01_itms_10.05820.05820.2 4.0023 0.2348 99.3 1675.4122 1675.8418 8048.8 1 4.98 60.0 1 K.GNSERPSAVAGFINQK.N * Jamie_phos_01_itms_35.15028.15028.3 3.948 0.3241 95.0 4351.764 4353.7944 7522.0 2 4.732 17.3 1 K.AIPTFSFGKPFFSSNTSSLQSFQNPFTASQSNINTNAPLR.T * Jamie_phos_01_itms_11.06216.06216.2 2.5168 0.0624 98.0 1212.0322 1212.4319 6541.2 99 4.779 65.0 1 R.TLNIQPEVAVK.A * Jamie_phos_01_itms_18.08775.08775.2 4.1976 0.536 100.0 2053.412 2054.1777 9043.7 1 8.811 52.6 1 K.AAINFSNVTDLTNNSTDGAK.I * Jamie_phos_01_itms_18.08797.08797.3 2.9917 0.2047 94.3 2054.6343 2054.1777 6309.7 1 4.684 38.2 1 K.AAINFSNVTDLTNNSTDGAK.I * Jamie_phos_01_itms_17.08563.08563.2 5.509 0.5386 100.0 1983.1122 1983.099 8688.9 1 9.248 69.4 1 A.AINFSNVTDLTNNSTDGAK.I YOL039W 2 2 37.7% 106 10746 4.0 U RPP2A SGDID:S000005399, Chr XV from 254295-254615, Verified ORF, "Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * Jamie_phos_01_itms_10.05902.05902.2 2.9174 0.2967 100.0 1333.9922 1334.4229 6123.3 1 6.769 77.3 1 K.SVDELITEGNEK.L * Jamie_phos_01_itms_32.13673.13673.2 4.6558 0.4143 100.0 3075.0723 3074.9753 6836.8 1 8.096 37.0 1 A.SGDAAAEEEKEEEAAEES*DDDMGFGLFD.- YDL081C 1 1 34.9% 106 10908 3.9 U RPP1A SGDID:S000002239, Chr IV from 310122-309802, reverse complement, Verified ORF, "Ribosomal protein P1 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component" * Jamie_phos_01_itms_27.11883.11883.3 5.254 0.4553 100.0 3812.6943 3813.8171 8111.5 1 7.347 25.7 1 A.GVAGGVAGGEAGEAEAEKEEEEAKEES*DDDMGFGLFD.- YFR031C-A 7 8 34.3% 254 27408 11.1 U RPL2A SGDID:S000002104, Chr VI from 221406-221403,221255-220495, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E. coli L2 and rat L8 ribosomal proteins" YIL018W 7 8 34.3% 254 27408 11.1 U RPL2B SGDID:S000001280, Chr IX from 316766-316769,317170-317930, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl2Ap and has similarity to E. coli L2 and rat L8 ribosomal proteins; expression is upregulated at low temperatures" Jamie_phos_01_itms_10.05616.05616.2 3.1663 0.3073 100.0 1262.8522 1262.411 5628.2 1 5.329 81.8 1 R.KGAGSIFTSHTR.L Jamie_phos_01_itms_24.10911.10911.3 4.8808 0.2526 98.8 3181.6443 3177.5823 9042.1 1 5.122 30.8 1 K.KASLNVGNVLPLGSVPEGTIVSNVEEKPGDR.G Jamie_phos_01_itms_12.06403.06403.2 3.3047 0.2494 100.0 1843.4521 1842.0183 8172.6 2 5.344 46.9 1 R.ASGNYVIIIGHNPDENK.T Jamie_phos_01_itms_11.06315.06315.3 4.1734 0.3515 100.0 2099.1243 2099.3108 7469.1 53 6.095 31.9 1 R.ASGNYVIIIGHNPDENKTR.V Jamie_phos_01_itms_11.06306.06306.2 4.0622 0.3905 100.0 2099.1921 2099.3108 4260.9 1 7.198 55.6 2 R.ASGNYVIIIGHNPDENKTR.V Jamie_phos_01_itms_3.02733.02733.2 2.5355 0.115 99.6 1261.6522 1262.4086 8327.3 59 5.134 54.2 1 K.ASTISRGAVSGQK.A Jamie_phos_01_itms_6.04461.04461.2 2.5716 0.1675 100.0 1304.3322 1304.4459 5184.2 20 5.211 68.2 1 R.TGLLRGSQKTQD.- YDR382W 1 1 32.7% 110 11050 4.1 U RPP2B SGDID:S000002790, Chr IV from 1239482-1239814, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * Jamie_phos_01_itms_25.11333.11333.3 4.4785 0.3349 97.1 3642.4443 3642.621 8529.3 1 5.803 22.1 1 A.AAGAAGAAAGGDAAEEEKEEEAKEES*DDDMGFGLFD.- YMR142C 4 4 30.7% 199 22525 11.1 U RPL13B SGDID:S000004750, Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein" Jamie_phos_01_itms_8.05067.05067.2 2.6402 0.3964 100.0 965.03217 965.0971 4226.3 2 6.808 83.3 1 K.AAGLTAAYAR.T Jamie_phos_01_itms_10.05669.05669.2 2.8337 0.2888 100.0 1333.3121 1334.4313 7472.9 3 5.224 75.0 1 R.NQEIFDANVQR.L * Jamie_phos_01_itms_27.12034.12034.3 4.394 0.1827 98.7 2955.5344 2955.2512 6592.0 20 5.147 24.1 1 R.DGKAPEAEQVLSAAATFPIAQPATDVEAR.A Jamie_phos_01_itms_8.04883.04883.2 2.7425 0.3527 100.0 1193.8322 1194.2462 5344.7 1 8.221 80.0 1 R.AVQDNGESAFR.T YPL131W 5 7 29.6% 297 33715 6.8 U RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly" * Jamie_phos_01_itms_32.13857.13857.3 5.2928 0.3681 100.0 3500.1843 3500.7944 8476.3 1 6.692 26.7 2 K.LGLDETYKGVEEVEGEYELTEAVEDGPRPFK.V * Jamie_phos_01_itms_25.11152.11152.2 3.4663 0.2775 100.0 2363.3323 2361.4749 8117.3 1 5.559 45.0 1 L.GLDETYKGVEEVEGEYELTEA.V * Jamie_phos_01_itms_35.14937.14937.2 4.0888 0.3206 100.0 2096.152 2094.285 6218.0 1 5.828 59.4 1 R.FPGWDFETEEIDPELLR.S * Jamie_phos_01_itms_47.19353.19353.3 5.0768 0.4266 100.0 3343.9744 3343.602 8358.8 1 7.096 30.6 2 R.SYIFGGHVSQYMEELADDDEERFSELFK.G * Jamie_phos_01_itms_9.05518.05518.2 2.5292 0.2397 100.0 1140.8322 1141.3561 5371.9 1 5.206 81.8 1 R.VAAKIAALAGQQ.- YJR053W 13 15 28.2% 574 66087 5.9 U BFA1 SGDID:S000003814, Chr X from 533941-535665, Verified ORF, "Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis" * Jamie_phos_01_itms_25.11441.11441.2 3.6568 0.2272 97.4 2458.892 2457.5671 8326.3 1 5.525 47.5 2 L.TLNGLDEPETS*FEELNTTLPR.F * Jamie_phos_01_itms_21.09857.09857.2 3.5591 0.328 100.0 1785.8722 1786.9384 7276.0 1 6.777 60.7 2 R.TGPFKNDIFAEEFDR.K * Jamie_phos_01_itms_2.01997.01997.2 2.4191 0.258 98.3 864.71216 863.9462 4469.8 14 4.822 71.4 1 K.LSNSVTSR.N * Jamie_phos_01_itms_42.17315.17315.3 5.2507 0.3598 96.0 4173.9546 4171.1685 5395.3 1 6.216 22.9 1 K.FSS*DDEGDFLTGFEELEGEAIDETISSNDKESADHPR.F * Jamie_phos_01_itms_5.03516.03516.2 2.5176 0.2399 98.3 1152.9521 1153.237 7730.4 1 4.822 77.8 1 K.FSDVDTANRK.A * Jamie_phos_01_itms_17.08499.08499.3 3.6023 0.1289 97.8 2300.5745 2301.6262 6754.0 1 4.818 40.8 1 R.ATSRNQKVIGNMILDEQNLR.W * Jamie_phos_01_itms_18.08713.08713.2 3.8071 0.3487 100.0 1516.0122 1515.768 8184.8 1 6.355 79.2 1 K.VIGNMILDEQNLR.W * Jamie_phos_01_itms_35.14897.14897.2 3.2655 0.2039 100.0 2684.2122 2682.002 7674.0 1 5.395 35.4 1 R.WVSVSEEEADPFAGIPEINLPPVGK.S * Jamie_phos_01_itms_31.13619.13619.2 2.8136 0.1897 92.0 2397.4521 2396.6562 8038.3 44 4.418 29.5 1 V.SVSEEEADPFAGIPEINLPPVGK.S * Jamie_phos_01_itms_12.06382.06382.2 4.2546 0.4041 100.0 2290.2522 2288.3892 8031.9 1 7.312 50.0 1 R.SKSQVNTPFVSNDNDGVYQST.A * Jamie_phos_01_itms_10.05922.05922.3 3.496 0.2528 93.8 2784.3843 2785.9438 9107.9 1 4.636 27.0 1 R.SKSQVNTPFVSNDNDGVYQSTAAQAR.L * Jamie_phos_01_itms_11.06340.06340.3 4.6788 0.4211 91.7 2866.1042 2865.9438 8525.2 1 6.544 31.0 1 R.S*KSQVNTPFVSNDNDGVYQSTAAQAR.L * Jamie_phos_01_itms_12.06652.06652.2 5.2098 0.5418 100.0 2570.9922 2570.6917 7363.8 1 9.44 43.5 1 K.SQVNTPFVSNDNDGVYQSTAAQAR.L YBR048W 3 3 24.4% 156 17749 10.8 U RPS11B SGDID:S000000252, Chr II from 332829-332873,333385-333810, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps11Ap and has similarity to E. coli S17 and rat S11 ribosomal proteins" YDR025W 3 3 24.4% 156 17749 10.8 U RPS11A SGDID:S000002432, Chr IV from 491511-491555,491895-492320, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps11Bp and has similarity to E. coli S17 and rat S11 ribosomal proteins" Jamie_phos_01_itms_8.04885.04885.2 2.2331 0.2514 100.0 1225.2322 1225.3843 5734.3 26 5.54 65.0 1 K.TAIEGSYIDKK.C Jamie_phos_01_itms_18.08599.08599.2 2.2647 0.3687 100.0 1149.2922 1150.3293 5483.0 2 7.635 66.7 1 K.CPFTGLVSIR.G Jamie_phos_01_itms_12.06700.06700.2 3.0651 0.3136 100.0 1859.0721 1857.1266 6253.9 1 5.76 53.1 1 R.VQVGDIVTVGQCRPISK.T YJL177W 4 4 23.9% 184 20551 10.9 U RPL17B SGDID:S000003713, Chr X from 90784-91092,91410-91655, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins" YKL180W 4 4 23.9% 184 20549 10.9 U RPL17A SGDID:S000001663, Chr XI from 109274-109582,109889-110134, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the components of the outer kinetochore DASH complex" Jamie_phos_01_itms_3.02466.02466.2 2.7656 0.2819 100.0 1237.0721 1237.3579 5898.8 158 6.013 59.1 1 M.ARYGATSTNPAK.S Jamie_phos_01_itms_6.04444.04444.2 2.7843 0.2108 98.1 1482.7322 1482.5931 7958.0 24 4.763 42.9 1 R.YGATSTNPAKSASAR.G Jamie_phos_01_itms_7.04552.04552.2 2.9013 0.2828 100.0 1166.1921 1166.3195 5264.9 1 5.966 85.0 1 R.TAQGKEFGVTK.A Jamie_phos_01_itms_16.08147.08147.2 4.9492 0.2392 100.0 1647.5322 1645.8558 10349.2 1 6.304 73.3 1 K.FVQGLLQNAAANAEAK.G YHR174W 6 7 23.3% 437 46914 6.0 U ENO2 SGDID:S000001217, Chr VIII from 451327-452640, Verified ORF, "Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is induced in response to glucose" Jamie_phos_01_itms_10.05959.05959.2 2.5802 0.3638 100.0 1416.3722 1417.556 6576.7 1 6.636 62.5 1 R.GNPTVEVELTTEK.G Jamie_phos_01_itms_53.21298.21298.2 3.3762 0.3547 100.0 3259.5522 3259.551 5693.9 1 5.697 26.6 1 R.YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A Jamie_phos_01_itms_53.21303.21303.3 4.0835 0.2568 100.0 3260.2744 3259.551 10097.3 4 6.263 21.9 1 R.YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK.A * Jamie_phos_01_itms_10.05790.05790.2 4.63 0.3203 100.0 1773.3722 1771.8779 8360.6 1 6.039 67.9 1 K.DGKYDLDFKNPESDK.S Jamie_phos_01_itms_42.17344.17344.3 5.1626 0.3003 100.0 2985.9243 2986.269 7867.5 1 7.341 38.0 2 K.RYPIVSIEDPFAEDDWEAWSHFFK.T Jamie_phos_01_itms_38.15868.15868.2 2.8304 0.3412 100.0 1822.4922 1823.0099 6699.8 1 6.358 50.0 1 R.SGETEDTFIADLVVGLR.T YFL010C 1 1 23.2% 211 22655 4.5 U WWM1 SGDID:S000001884, Chr VI from 115737-115102, reverse complement, Verified ORF, "WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes Gi phase growth arrest and clonal death that is suppressed by overexpression of MCA1" * Jamie_phos_01_itms_54.21979.21979.4 4.5801 0.2543 95.1 5708.8164 5709.1426 9726.0 144 4.718 14.2 1 A.DQAPPPYSSQSTPQVQAGAQAQQPRYYQPQQPQYPQYPQQQRYYPQQAP.M YDR447C 2 2 22.8% 136 15803 10.5 U RPS17B SGDID:S000002855, Chr IV from 1355543-1355541,1355226-1354819, reverse complement, Verified ORF, "Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Ap and has similarity to rat S17 ribosomal protein" YML024W 2 2 22.8% 136 15788 10.5 U RPS17A SGDID:S000004486, Chr XIII from 225889-225891,226290-226697, Verified ORF, "Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Bp and has similarity to rat S17 ribosomal protein" Jamie_phos_01_itms_16.08160.08160.2 3.5724 0.2871 100.0 1720.0322 1720.92 4754.4 1 5.643 64.3 1 R.KDQYVPEVSALDLSR.S Jamie_phos_01_itms_13.06731.06731.2 3.4098 0.3905 100.0 1702.8922 1703.8467 8189.5 1 6.727 60.0 1 R.SNGVLNVDNQTSDLVK.S YBL072C 3 3 22.0% 200 22490 10.7 U RPS8A SGDID:S000000168, Chr II from 89123-88521, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps8Ap and has similarity to rat S8 ribosomal protein" YER102W 3 3 22.0% 200 22490 10.7 U RPS8B SGDID:S000000904, Chr V from 363096-363698, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps8Bp and has similarity to rat S8 ribosomal protein" Jamie_phos_01_itms_10.05964.05964.2 2.7732 0.2849 99.6 1668.5322 1668.8931 5388.1 121 5.139 42.9 1 R.IAGVVYHPSNNELVR.T Jamie_phos_01_itms_9.05460.05460.2 3.1119 0.3949 100.0 1396.9922 1397.4845 5230.6 1 7.619 79.2 1 K.IESSVESQFSAGR.L Jamie_phos_01_itms_35.14975.14975.2 3.7336 0.4739 100.0 1950.3322 1949.1334 7923.1 1 8.952 60.0 1 R.CDGYILEGEELAFYLR.R YNL225C 9 11 21.5% 581 67400 6.0 U CNM67 SGDID:S000005169, Chr XIV from 224470-222725, reverse complement, Verified ORF, "Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration" * Jamie_phos_01_itms_21.09813.09813.3 5.451 0.3511 92.3 3377.0044 3377.4758 4291.5 1 6.535 26.8 2 R.LDS*PVS*ENGEIKDGEPIPQNWLNENHVGK.S * Jamie_phos_01_itms_37.15821.15821.2 5.0079 0.4308 100.0 2420.7722 2420.6936 7142.8 1 8.946 62.5 1 K.SILPLFVNPEDVINCNFSNAR.D * Jamie_phos_01_itms_22.10081.10081.2 4.6866 0.2358 100.0 1899.3522 1897.0203 8347.2 1 5.968 73.3 2 L.FVNPEDVINCNFSNAR.D * Jamie_phos_01_itms_6.04455.04455.3 3.8289 0.2649 96.7 1776.6843 1776.901 3638.8 9 5.172 48.2 1 K.NEKDKS*PIGTDVHKK.D * Jamie_phos_01_itms_4.02985.02985.2 2.7821 0.2956 90.3 1277.1921 1277.3335 4913.5 2 5.098 75.0 1 K.DKS*PIGTDVHK.K * Jamie_phos_01_itms_9.05375.05375.3 5.1362 0.4303 90.0 3047.5144 3046.9226 6967.5 1 6.706 28.8 1 R.ANEQASAQPTDEHTS*PDIS*IEDCNGAK.I * Jamie_phos_01_itms_50.20343.20343.3 3.6119 0.2518 97.9 2906.0344 2906.2585 9795.3 1 4.772 27.1 1 R.KAELFEIPIGILFFDLYDSEENSSK.L * Jamie_phos_01_itms_50.20433.20433.4 5.368 0.2834 97.8 3882.2566 3883.387 9049.5 1 4.843 22.4 1 R.KAELFEIPIGILFFDLYDSEENSSKLDHILQEK.Y * Jamie_phos_01_itms_50.20490.20490.3 4.7005 0.3136 100.0 3883.7043 3883.387 6012.0 4 5.441 21.9 1 R.KAELFEIPIGILFFDLYDSEENSSKLDHILQEK.Y YER131W 2 2 20.2% 119 13447 10.9 U RPS26B SGDID:S000000933, Chr V from 423948-424307, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps26Ap and has similarity to rat S26 ribosomal protein" YGL189C 2 2 20.2% 119 13505 10.8 U RPS26A SGDID:S000003157, Chr VII from 148594-148235, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps26Bp and has similarity to rat S26 ribosomal protein" Jamie_phos_01_itms_8.05151.05151.2 2.7091 0.2713 100.0 943.0122 943.091 3319.2 2 5.791 93.8 1 R.NIVEAAAVR.D Jamie_phos_01_itms_20.09334.09334.2 3.774 0.3373 100.0 1683.1322 1682.8676 4352.5 1 6.022 67.9 1 R.DLSEASVYPEYALPK.T YMR230W 1 1 20.0% 105 12738 9.1 U RPS10B SGDID:S000004843, Chr XIII from 732413-732464,732875-733140, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps10Ap and has similarity to rat ribosomal protein S10" YOR293W 1 1 20.0% 105 12739 8.8 U RPS10A SGDID:S000005819, Chr XV from 867095-867146,867584-867849, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps10Bp and has similarity to rat ribosomal protein S10" Jamie_phos_01_itms_42.17434.17434.2 4.5102 0.3771 100.0 2742.6921 2740.9849 11172.3 1 7.463 45.0 1 K.TQFSWQYYYYTLTEEGVEYLR.E YGR192C 7 7 19.9% 332 35747 7.0 U TDH3 SGDID:S000003424, Chr VII from 883815-882817, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " YJR009C 7 7 19.9% 332 35847 7.0 U TDH2 SGDID:S000003769, Chr X from 454595-453597, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " Jamie_phos_01_itms_10.05909.05909.2 2.4042 0.26 99.3 1089.2522 1089.2858 6008.7 4 4.976 72.2 1 M.VRVAINGFGR.I Jamie_phos_01_itms_8.05049.05049.2 2.6544 0.1655 90.6 1374.8322 1375.5217 5767.7 306 4.315 46.4 1 R.TASGNIIPSSTGAAK.A Jamie_phos_01_itms_9.05411.05411.2 2.5287 0.4381 100.0 1454.8121 1455.5217 3750.1 1 6.799 67.9 1 R.TAS*GNIIPSSTGAAK.A Jamie_phos_01_itms_7.04595.04595.2 2.0658 0.3176 99.6 1127.3722 1127.2365 1922.1 111 5.031 81.2 1 K.ETTYDEIKK.V Jamie_phos_01_itms_17.08289.08289.3 3.0707 0.1749 96.7 2629.9744 2633.8767 9290.8 2 5.172 30.0 1 Q.LS*PKFVKLVSWYDNEYGYSTR.V Jamie_phos_01_itms_17.08289.08289.2 3.6768 0.3257 100.0 1753.6522 1753.8651 9290.8 1 7.694 61.5 1 K.LVSWYDNEYGYSTR.V Jamie_phos_01_itms_11.06053.06053.2 3.7112 0.2744 100.0 1180.3121 1180.3898 6293.7 1 7.014 85.0 1 R.VVDLVEHVAKA.- YLR150W 3 3 19.8% 273 29995 9.7 U STM1 SGDID:S000004140, Chr XII from 440468-441289, Verified ORF, "Protein that binds G4 quadruplex and purine motif triplex nucleic acid; acts with Cdc13p to maintain telomere structure; interacts with ribosomes and subtelomeric Y' DNA; multicopy suppressor of tom1 and pop2 mutations" * Jamie_phos_01_itms_1.00207.00207.2 2.7173 0.2674 99.6 1282.7922 1281.4056 5729.8 1 5.188 68.2 1 R.SKDVTDSATTKK.S * Jamie_phos_01_itms_21.09835.09835.3 4.0375 0.2939 100.0 2867.4243 2864.1443 8013.3 1 5.335 32.3 1 K.TAQLSLQDYLNQQANNQFNKVPEAK.K * Jamie_phos_01_itms_2.01529.01529.2 3.5794 0.4051 100.0 1733.8121 1733.8356 6488.4 1 8.611 62.5 1 R.KGNNTANATNSANTVQK.N YBR181C 5 5 19.5% 236 26996 10.4 U RPS6B SGDID:S000000385, Chr II from 592769-592764,592411-591707, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Ap and has similarity to rat S6 ribosomal protein" YPL090C 5 5 19.5% 236 26996 10.4 U RPS6A SGDID:S000006011, Chr XVI from 378392-378387,377992-377288, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to rat S6 ribosomal protein" Jamie_phos_01_itms_12.06406.06406.3 2.6013 0.2357 98.7 2390.0645 2386.6233 8049.3 376 5.123 25.0 1 R.VFFDKRIGQEVDGEAVGDEFK.G Jamie_phos_01_itms_12.06406.06406.2 4.4075 0.4163 100.0 1593.7122 1593.6874 8049.3 1 8.215 78.6 1 R.IGQEVDGEAVGDEFK.G Jamie_phos_01_itms_21.09783.09783.3 3.5167 0.2084 91.5 2188.1042 2188.3984 6013.9 90 4.591 32.9 1 R.IGQEVDGEAVGDEFKGYVFK.I Jamie_phos_01_itms_27.12178.12178.2 3.2927 0.3298 100.0 2301.612 2301.5579 7833.2 1 5.536 35.0 1 R.IGQEVDGEAVGDEFKGYVFKI.S Jamie_phos_01_itms_16.08137.08137.3 4.6601 0.2739 100.0 2103.3245 2103.3457 8133.8 1 5.462 38.9 1 R.NAQAQREAAAEYAQLLAKR.L YBR171W 1 1 19.4% 206 24231 7.2 U SEC66 SGDID:S000000375, Chr II from 578359-578979, Verified ORF, "Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER" * Jamie_phos_01_itms_26.11735.11735.4 4.6723 0.0401 95.2 4833.3765 4830.464 6639.7 338 5.061 16.2 1 V.YTPLIY*VFILVVSLVMFAS*SYRKKQAKKISEQPSIFDEND.A Reverse_YNL046W 1 1 18.6% 172 19350 10.2 U YNL046W SGDID:S000004991, Chr XIV from 542305-542823, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_52.21131.21131.2 2.2495 0.164 95.7 3507.5322 3507.9368 8913.9 56 5.304 21.0 1 F.IFS*LWSSVASFPSLLPGVLGTLLGTYPT*GMFS.A YGR120C 1 1 18.3% 262 30325 4.6 U COG2 SGDID:S000003352, Chr VII from 730826-730038, reverse complement, Verified ORF, "Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments" * Jamie_phos_01_itms_35.14976.14976.4 4.2809 0.2356 91.4 5855.0566 5858.196 4883.6 164 4.99 14.9 1 D.DYLTFSNT*Y*TDEENETLINLEKTQSDLQKFMTQLDHLIKDDISNTQEI.I YOR373W 19 19 17.4% 851 94104 7.0 U NUD1 SGDID:S000005900, Chr XV from 1036830-1039385, Verified ORF, "Component of the spindle pole body outer plaque, required for exit from mitosis" * Jamie_phos_01_itms_24.11064.11064.2 2.9826 0.2687 97.1 1404.0922 1404.4735 5157.4 1 5.591 81.8 1 K.DLS*GVLETNTFK.R * Jamie_phos_01_itms_16.07962.07962.2 2.4535 0.242 94.4 1480.2322 1480.661 8109.0 18 4.486 54.2 1 K.DLSGVLETNTFKR.H * Jamie_phos_01_itms_30.12987.12987.3 4.8085 0.2892 100.0 2861.8145 2862.8909 6724.5 1 7.396 39.4 1 K.VSSSFSDDS*DSGPAAEAHDVFDGILQK.Q * Jamie_phos_01_itms_30.12964.12964.2 3.5814 0.1174 91.4 2863.912 2862.8909 3668.1 2 5.163 34.6 1 K.VSSSFSDDS*DSGPAAEAHDVFDGILQK.Q * Jamie_phos_01_itms_34.14421.14421.3 4.3368 0.1602 97.9 2941.7644 2942.8909 4001.2 1 5.46 31.7 1 K.VSSSFS*DDS*DSGPAAEAHDVFDGILQK.Q * Jamie_phos_01_itms_11.06059.06059.2 3.3843 0.2379 100.0 1724.9521 1724.738 6616.4 1 6.201 64.3 1 K.SNYLVGSYPS*NSNNK.N * Jamie_phos_01_itms_11.06088.06088.2 3.1138 0.3475 99.6 2070.7522 2069.01 6141.0 1 4.99 41.2 1 R.TKEEDEEDTSNSFEFSSS.S * Jamie_phos_01_itms_5.03852.03852.2 2.4768 0.2791 100.0 1079.7322 1080.1857 3625.2 2 5.26 72.2 1 T.STKPGDVGYR.Q * Jamie_phos_01_itms_23.10533.10533.3 5.5759 0.3392 92.9 3286.0444 3284.385 7039.8 1 6.455 34.6 1 K.KIQEEENLANSDDT*PLDT*PKFNDLFTK.N * Jamie_phos_01_itms_11.06118.06118.2 4.5408 0.3885 100.0 2130.1921 2130.2268 7444.4 1 8.208 55.6 1 K.IQEEENLANSDDTPLDTPK.F * Jamie_phos_01_itms_11.05989.05989.2 4.0147 0.3711 100.0 2210.0122 2210.2268 7995.2 1 6.277 50.0 1 K.IQEEENLANSDDT*PLDTPK.F * Jamie_phos_01_itms_27.11895.11895.3 4.1402 0.4186 96.3 3154.9744 3156.211 9205.3 1 6.211 26.0 1 K.IQEEENLANSDDT*PLDT*PKFNDLFTK.N * Jamie_phos_01_itms_27.11937.11937.2 3.7169 0.3696 100.0 3155.7922 3156.211 7726.2 1 6.237 30.0 1 K.IQEEENLANSDDT*PLDT*PKFNDLFTK.N * Jamie_phos_01_itms_24.10881.10881.3 5.3708 0.2392 97.7 3006.0244 3005.046 6970.7 2 5.562 32.3 1 K.TFPAERVEDITSIS*EVNT*SFNETEK.Q * Jamie_phos_01_itms_18.08655.08655.2 4.9967 0.4638 100.0 2222.912 2223.2659 7663.4 1 7.663 58.3 1 R.VEDITSISEVNTS*FNETEK.Q * Jamie_phos_01_itms_20.09654.09654.2 4.3448 0.4095 100.0 2223.152 2223.2659 8494.4 1 7.141 50.0 1 R.VEDITSIS*EVNTSFNETEK.Q * Jamie_phos_01_itms_21.09699.09699.2 4.6582 0.2967 100.0 2303.5322 2303.2659 6628.8 1 7.312 55.6 1 R.VEDITSIS*EVNTS*FNETEK.Q * Jamie_phos_01_itms_10.05736.05736.2 2.9996 0.349 100.0 1471.6322 1471.52 6028.7 1 6.45 62.5 1 K.LSGSPSYDSDWEK.I * Jamie_phos_01_itms_11.06261.06261.2 3.011 0.2872 96.4 1550.5521 1551.52 5814.4 3 5.784 58.3 1 K.LSGS*PSYDSDWEK.I YPL255W 5 5 17.4% 385 45384 6.5 U BBP1 SGDID:S000006176, Chr XVI from 67725-68882, Verified ORF, "Protein required for the spindle pole body (SPB) duplication, localized at the central plaque periphery; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p" * Jamie_phos_01_itms_24.10761.10761.2 3.4058 0.347 100.0 1462.2122 1462.5714 7375.8 2 6.412 75.0 1 K.DALFGTDIS*PSMK.Y * Jamie_phos_01_itms_13.07031.07031.2 2.4198 0.1155 91.5 1541.1921 1540.5461 4469.8 5 5.152 54.2 1 R.SNS*WSGLDSTLHR.K * Jamie_phos_01_itms_14.07369.07369.2 3.542 0.3425 100.0 1264.3722 1264.2977 7045.5 1 6.397 83.3 1 R.DLEDLCEDVR.E * Jamie_phos_01_itms_40.16804.16804.2 3.4679 0.2806 100.0 2058.7922 2059.2834 7909.6 1 6.431 43.8 1 R.DNYESEIHDLLLQLSLR.N * Jamie_phos_01_itms_12.06405.06405.2 3.2642 0.3927 100.0 1494.0322 1493.4839 7731.7 1 6.15 73.1 1 R.KDTS*AGSNIFSTGQ.- YGL031C 3 3 17.4% 155 17614 11.3 U RPL24A SGDID:S000002999, Chr VII from 437939-437472, reverse complement, Verified ORF, "Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Bp and has similarity to rat L24 ribosomal protein; not essential for translation but may be required for normal translation rate" YGR148C 3 3 17.4% 155 17547 11.4 U RPL24B SGDID:S000003380, Chr VII from 787784-787317, reverse complement, Verified ORF, "Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Ap and has similarity to rat L24 ribosomal protein; not essential for translation but may be required for normal translation rate" Jamie_phos_01_itms_7.04839.04839.2 2.633 0.0949 98.3 937.09216 937.0867 4771.9 2 4.837 92.9 1 K.SASLFKQR.K Jamie_phos_01_itms_28.12282.12282.2 2.5457 0.2095 92.8 1006.83215 1006.2358 5440.8 1 4.433 92.9 1 R.IAWTVLFR.K Jamie_phos_01_itms_7.04723.04723.2 3.1189 0.3345 100.0 1135.5721 1136.2963 5953.8 1 5.938 85.0 1 K.GAFQKVAATSR.- YLR457C 4 4 17.2% 319 37354 10.2 U NBP1 SGDID:S000004449, Chr XII from 1056768-1055809, reverse complement, Verified ORF, "Component of the mitotic apparatus containing a coiled-coil domain, essential for the G2/M transition" * Jamie_phos_01_itms_23.10468.10468.2 2.8451 0.3154 96.7 2025.5322 2026.1644 8234.9 2 5.745 50.0 1 R.ILEDLLDSS*NIHPSYTK.S * Jamie_phos_01_itms_16.07969.07969.2 2.6409 0.2537 90.9 1373.2322 1373.3911 8806.2 2 5.192 60.0 1 R.TNS*LFTSS*PMK.T * Jamie_phos_01_itms_17.08447.08447.3 4.5606 0.2901 100.0 3158.6042 3159.4663 8744.3 11 5.396 25.0 1 T.YNRDGNIPEMQPLQENISPACPTPPYR.S * Jamie_phos_01_itms_19.08973.08973.3 4.4393 0.3977 93.3 3239.3044 3239.4663 10364.2 1 6.417 29.8 1 T.YNRDGNIPEMQPLQENISPACPT*PPYR.S YCR031C 2 2 16.8% 137 14537 10.7 U RPS14A SGDID:S000000627, Chr III from 178215-178209,177901-177495, reverse complement, Verified ORF, "Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; nearly identical to Rps14Bp and similar to E. coli S11 and rat S14 ribosomal proteins" YJL191W 2 2 16.7% 138 14650 10.5 U RPS14B SGDID:S000003727, Chr X from 73786-73795,74204-74610, Verified ORF, "Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; nearly identical to Rps14Ap and similar to E. coli S11 and rat S14 ribosomal proteins" Jamie_phos_01_itms_10.05667.05667.2 2.8748 0.2067 100.0 1092.9521 1093.1844 4820.6 1 5.452 77.8 1 R.DNSQVFGVAR.I Jamie_phos_01_itms_7.04565.04565.2 2.3999 0.2443 99.6 1254.4521 1254.4318 4350.5 28 5.025 54.2 1 R.TKTPGPGGQAALR.A YDR356W 19 27 15.9% 944 111782 7.1 U SPC110 SGDID:S000002764, Chr IV from 1186098-1188932, Verified ORF, "Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner" * Jamie_phos_01_itms_7.04545.04545.2 3.0589 0.3226 96.9 1384.6522 1384.4429 5232.2 2 5.709 68.2 1 R.NTTQTQVVS*PTK.V * Jamie_phos_01_itms_19.09144.09144.2 2.3893 0.3655 97.1 1202.8121 1203.162 4498.1 1 5.658 77.8 2 R.S*IDDTIDSTR.L * Jamie_phos_01_itms_25.11177.11177.2 3.5212 0.3215 94.3 2168.372 2168.281 3992.4 1 5.231 58.8 1 T.RLFSEASQFDDS*FPEIKA.N * Jamie_phos_01_itms_25.11208.11208.2 3.4405 0.3749 100.0 1861.1522 1861.0148 9554.7 1 6.595 60.0 1 R.LFSEASQFDDSFPEIK.A * Jamie_phos_01_itms_27.11973.11973.2 4.253 0.1772 94.0 1943.8522 1941.0148 9860.0 1 5.282 66.7 2 R.LFSEASQFDDS*FPEIK.A * Jamie_phos_01_itms_20.09579.09579.2 2.972 0.2712 96.8 1464.1522 1464.4851 6475.4 1 5.729 77.3 1 A.SQFDDS*FPEIKA.N * Jamie_phos_01_itms_14.07419.07419.3 4.161 0.3387 100.0 2670.2944 2670.76 6266.0 1 6.163 35.7 2 K.EKNDTLNNYDTLEEETDDLKNR.L * Jamie_phos_01_itms_14.07273.07273.2 3.307 0.2526 99.6 2671.6921 2670.76 6419.2 1 5.044 40.5 1 K.EKNDTLNNYDTLEEETDDLKNR.L * Jamie_phos_01_itms_15.07747.07747.2 3.3126 0.2861 100.0 2413.372 2413.4705 6911.0 1 5.974 44.7 1 K.NDTLNNYDTLEEETDDLKNR.L * Jamie_phos_01_itms_17.08328.08328.2 5.7712 0.4119 100.0 2161.392 2160.3862 9257.4 1 7.578 58.3 1 K.TVKDQVLELENNSDVQSLK.L * Jamie_phos_01_itms_15.07744.07744.2 5.4501 0.3912 100.0 1833.5122 1831.9744 11161.8 1 8.003 80.0 1 K.DQVLELENNSDVQSLK.L * Jamie_phos_01_itms_11.06189.06189.2 3.4313 0.3483 100.0 1262.0721 1262.3997 8331.5 1 7.197 90.0 1 K.IAELEEEISTK.N * Jamie_phos_01_itms_7.04749.04749.2 3.484 0.3285 100.0 1393.3522 1393.4906 5627.6 1 6.633 81.8 1 K.TITDNELESKDK.L * Jamie_phos_01_itms_14.07084.07084.4 3.5838 0.2289 97.9 2399.4165 2399.5676 7141.0 35 4.798 32.5 1 K.DIEEYKESAKDSEDKIEELK.I * Jamie_phos_01_itms_14.07137.07137.2 4.3533 0.2663 100.0 2399.872 2399.5676 8154.2 1 6.766 47.4 2 K.DIEEYKESAKDSEDKIEELK.I * Jamie_phos_01_itms_15.07557.07557.3 5.0195 0.3252 100.0 2401.1343 2399.5676 6608.2 1 6.219 43.4 5 K.DIEEYKESAKDSEDKIEELK.I * Jamie_phos_01_itms_7.04594.04594.2 3.8912 0.2737 100.0 1590.4922 1589.6592 5434.9 1 5.81 83.3 1 R.EKEELNENSNNIR.I * Jamie_phos_01_itms_7.04607.04607.3 3.2724 0.2406 93.5 1590.8944 1589.6592 3995.4 2 4.677 45.8 1 R.EKEELNENSNNIR.I * Jamie_phos_01_itms_21.09769.09769.2 4.6254 0.4614 100.0 1695.9521 1696.8113 9285.6 1 8.839 76.9 1 K.NYLSEITSLQEENR.R YBR191W 1 1 15.0% 160 18242 10.4 U RPL21A SGDID:S000000395, Chr II from 606265-606275,606664-607135, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein" YPL079W 1 1 15.0% 160 18274 10.4 U RPL21B SGDID:S000006000, Chr XVI from 406633-406643,407065-407536, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Ap and has similarity to rat L21 ribosomal protein" Jamie_phos_01_itms_29.12930.12930.2 3.8092 0.4525 100.0 2648.2722 2648.9727 9283.8 1 7.261 50.0 1 R.ESRIVSTEGNVPQTLAPVPYETFI.- YLR185W 2 2 14.8% 88 9850 11.6 U RPL37A SGDID:S000004175, Chr XII from 522665-522671,523031-523290, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to Rpl37Bp and to rat L37 ribosomal protein" * Jamie_phos_01_itms_4.02818.02818.2 2.7359 0.2881 99.3 1202.9521 1202.2385 6605.3 3 4.98 75.0 1 K.TCSSCGYPAAK.T * Jamie_phos_01_itms_4.02945.02945.2 1.9772 0.1745 100.0 1459.1522 1459.5311 7728.3 1 5.49 54.2 1 K.TCSSCGYPAAKTR.S YLR075W 2 2 14.5% 221 25361 10.0 U RPL10 SGDID:S000004065, Chr XII from 282928-283593, Verified ORF, "Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subunits; regulates translation initiation; has similarity to rat L10 ribosomal protein and to members of the QM gene family" * Jamie_phos_01_itms_8.04921.04921.2 3.0628 0.342 100.0 1365.5721 1365.4827 3707.0 2 6.017 75.0 1 R.EAGEVKDDGAFVK.F * Jamie_phos_01_itms_26.11598.11598.2 2.8896 0.363 100.0 2185.632 2185.401 8364.6 3 6.027 36.1 1 K.KGSLENNIREFPEYFAAQA.- YBL027W 3 3 14.3% 189 21704 11.4 U RPL19B SGDID:S000000123, Chr II from 168426-168427,168812-169379, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Bp and has similarity to rat L19 ribosomal protein; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal" YBR084C-A 3 3 14.3% 189 21704 11.4 U RPL19A SGDID:S000002156, Chr II from 415255-415254,414747-414180, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Bp and has similarity to rat L19 ribosomal protein; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal" Jamie_phos_01_itms_14.07113.07113.2 3.6634 0.4506 100.0 2058.5923 2059.2432 5426.9 1 7.369 55.9 1 R.KVWLDPNETSEIAQANSR.N Jamie_phos_01_itms_16.08170.08170.2 4.3278 0.433 100.0 1930.7722 1931.0691 9066.8 1 7.275 65.6 1 K.VWLDPNETSEIAQANSR.N Jamie_phos_01_itms_17.08230.08230.2 2.7124 0.2556 100.0 1098.3722 1098.3335 8005.7 1 5.797 87.5 1 R.LPSQVVWIR.R YLR441C 2 2 14.1% 255 28743 10.0 U RPS1A SGDID:S000004433, Chr XII from 1018904-1018137, reverse complement, Verified ORF, "Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Bp and has similarity to rat S3a ribosomal protein" YML063W 2 2 14.1% 255 28812 10.0 U RPS1B SGDID:S000004528, Chr XIII from 146482-147249, Verified ORF, "Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Ap and has similarity to rat S3a ribosomal protein" Jamie_phos_01_itms_18.08611.08611.2 3.5668 0.3544 100.0 2062.7522 2062.2097 8782.3 1 6.778 47.1 1 R.VVEVCLADLQGSEDHSFR.K Jamie_phos_01_itms_21.09791.09791.2 2.6329 0.2364 98.9 1847.5521 1848.0375 8596.8 5 4.953 41.2 1 K.FDVGALMALHGEGSGEEK.G YLR061W 1 1 14.0% 121 13693 6.2 U RPL22A SGDID:S000004051, Chr XII from 263195-263206,263596-263949, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to Rpl22Bp and to rat L22 ribosomal protein" * Jamie_phos_01_itms_20.09574.09574.2 3.6413 0.2816 100.0 2075.5723 2073.0845 7094.6 1 5.221 62.5 1 R.LAFYQVTPEEDEEEDEE.- YDR418W 2 2 13.9% 165 17823 9.4 U RPL12B SGDID:S000002826, Chr IV from 1301606-1302103, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins" YEL054C 2 2 13.9% 165 17823 9.4 U RPL12A SGDID:S000000780, Chr V from 53218-52721, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Bp; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins" Jamie_phos_01_itms_27.12150.12150.3 2.858 0.2957 100.0 2565.0544 2564.8113 3977.2 5 5.32 29.5 1 R.VDFKNPHDIIEGINAGEIEIPEN.- Jamie_phos_01_itms_27.12167.12167.2 3.3828 0.2922 99.6 2566.9922 2564.8113 7066.4 2 5.176 36.4 1 R.VDFKNPHDIIEGINAGEIEIPEN.- YHR089C 1 1 13.2% 205 21480 11.5 U GAR1 SGDID:S000001131, Chr VIII from 283300-282683, reverse complement, Verified ORF, "Protein component of the H/ACA snoRNP pseudouridylase complex, involved in the modification and cleavage of the 18S pre-rRNA" * Jamie_phos_01_itms_30.13221.13221.3 3.9224 0.3322 100.0 3062.9644 3062.356 6099.0 1 5.237 29.8 1 R.SFQQGPPDTVLEMGAFLHPCEGDIVCR.S YLR321C 1 1 12.9% 426 48777 5.2 U SFH1 SGDID:S000004313, Chr XII from 777864-776584, reverse complement, Verified ORF, "Subunit of the RSC chromatin remodeling complex required for kinetochore function in chromosome segregation; essential gene required for cell cycle progression; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog" * Jamie_phos_01_itms_72.28377.28377.4 3.2936 0.2188 97.6 6331.2964 6325.9453 9092.9 69 5.595 12.7 1 N.GPSNKAQAQDIGNAVLPDLQDQHHNPFNILRYPKIRDTFINGKVVSPY*RLNTDQE.T YDR249C 1 1 12.1% 373 43790 8.7 U YDR249C SGDID:S000002657, Chr IV from 959796-958675, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_34.14671.14671.4 4.9671 0.263 95.5 5538.1367 5543.332 7367.2 139 5.048 14.4 1 L.PAKKLRHHQKLTLQDLPVEIIQHIFVFTKGEPSMVT*LNRFFYS*CL.K Reverse_YKL085W 1 1 11.4% 334 35650 8.5 U MDH1 SGDID:S000001568, Chr XI from 278767-279771, Verified ORF, "Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle" * Jamie_phos_01_itms_44.18187.18187.4 4.167 0.2777 91.3 3981.4165 3975.446 8003.7 1 4.992 20.3 1 N.KLVQAVIPVTSNVPNS*IVLIAANPASEATAAALDRVIS*.A Reverse_YDL059C 1 1 10.5% 238 26630 8.6 U RAD59 SGDID:S000002217, Chr IV from 344953-344237, reverse complement, Verified ORF, "Protein involved in the repair of double-strand breaks in DNA during vegetative growth via recombination and single-strand annealing; anneals complementary single-stranded DNA; homologous to Rad52p" * Jamie_phos_01_itms_94.37698.37698.4 3.2378 0.2076 93.9 2842.8564 2844.8762 7810.1 75 5.046 26.4 1 V.QAEAVVT*YKVEST*NTNEGNNVATFP.Q YNL248C 1 1 10.4% 415 46651 9.5 U RPA49 SGDID:S000005192, Chr XIV from 182609-181362, reverse complement, Verified ORF, "RNA polymerase I subunit A49" * Jamie_phos_01_itms_42.17457.17457.4 3.3725 0.1729 95.4 5231.6167 5229.3735 6696.1 369 5.05 14.3 1 P.SDTT*FDLY*KKKKSEKDEFVLHGENERLEYEGYTDSSSQASNQY.V YDL229W 3 3 10.0% 613 66602 5.4 U SSB1 SGDID:S000002388, Chr IV from 44066-45907, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; interacts with the phosphatase subunit Reg1p" YNL209W 3 3 10.0% 613 66595 5.5 U SSB2 SGDID:S000005153, Chr XIV from 252060-253901, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; homolog of SSB1" Jamie_phos_01_itms_8.05082.05082.2 3.7444 0.3055 100.0 1553.6322 1552.7739 6982.8 1 6.582 67.9 1 R.LIGDAAKNQAALNPR.N Jamie_phos_01_itms_27.12099.12099.2 3.6364 0.2799 100.0 2161.2322 2161.4138 7758.6 1 6.614 50.0 1 K.VIDVDGNPVIEVQYLEETK.T Jamie_phos_01_itms_37.15765.15765.2 2.4129 0.2181 99.6 2964.132 2965.1511 8181.8 7 5.011 25.0 1 R.TLSSVTQTTVEVDSLFDGEDFESSLTR.A YHL034C 2 2 9.9% 294 32990 5.7 U SBP1 SGDID:S000001026, Chr VIII from 34075-33191, reverse complement, Verified ORF, "Nucleolar single-strand nucleic acid binding protein; associates with small nuclear RNAs" * Jamie_phos_01_itms_20.09478.09478.3 4.1708 0.2792 98.7 3345.9844 3346.494 8857.1 1 5.132 25.9 1 R.ELTVDVAVIRPENDEEEIEQETGSEEKQE.- * Jamie_phos_01_itms_9.05529.05529.2 4.6555 0.257 100.0 2620.2322 2618.6814 9317.2 1 5.408 57.1 1 A.VIRPENDEEEIEQETGSEEKQE.- YJL158C 1 1 9.7% 227 23242 4.7 U CIS3 SGDID:S000003694, Chr X from 122865-122182, reverse complement, Verified ORF, "Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family" YKL164C 1 1 6.5% 341 34622 6.5 U PIR1 SGDID:S000001647, Chr XI from 142824-141799, reverse complement, Verified ORF, "O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-glucan; mediates mitochondrial translocation of Apn1p; expression regulated by the cell integrity pathway and by Swi5p during the cell cycle" YKL163W 1 1 6.8% 325 33004 5.7 U PIR3 SGDID:S000001646, Chr XI from 144406-145383, Verified ORF, "O-glycosylated covalently-bound cell wall protein required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway" YJL160C 1 1 7.7% 287 30215 9.0 U YJL160C SGDID:S000003696, Chr X from 118820-117957, reverse complement, Uncharacterized ORF, "Hypothetical protein" YJL159W 1 1 5.7% 387 38619 5.4 U HSP150 SGDID:S000003695, Chr X from 120444-121607, Verified ORF, "O-mannosylated heat shock protein that is secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation" Jamie_phos_01_itms_21.09943.09943.2 4.4989 0.4153 100.0 2285.0322 2284.5796 9186.7 1 7.428 50.0 1 R.IGSIVANRQFQFDGPPPQAGAI.Y YOL127W 1 1 9.2% 142 15758 10.1 U RPL25 SGDID:S000005487, Chr XV from 80347-80359,80774-81189, Verified ORF, "Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 26S rRNA via a conserved C-terminal motif" * Jamie_phos_01_itms_16.08040.08040.2 2.6706 0.2592 99.6 1454.0322 1451.576 4948.6 42 5.167 58.3 1 R.LTADYDALDIANR.I YCR020C-A 1 1 9.1% 88 9725 5.4 U MAK31 SGDID:S000000614, Chr III from 155093-154827, reverse complement, Verified ORF, "Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family" * Jamie_phos_01_itms_4.03213.03213.2 2.1958 0.0875 95.2 908.4122 909.99274 4164.1 12 4.547 78.6 1 E.ERMGSSSR.M YJR093C 1 1 8.9% 327 35777 4.4 U FIP1 SGDID:S000003853, Chr X from 604120-603137, reverse complement, Verified ORF, "Subunit of cleavage polyadenylation factor (CPF), interacts directly with poly(A) polymerase (Pap1p) to regulate its activity" * Jamie_phos_01_itms_39.16494.16494.2 2.407 0.3064 100.0 2960.132 2959.24 7814.0 124 6.149 21.4 1 E.RLITEGEANQGVTATTVKATESDGNVPKA.M YML074C 3 4 8.8% 411 46553 4.5 U FPR3 SGDID:S000004539, Chr XIII from 121324-120089, reverse complement, Verified ORF, "Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase); FK506 binding protein; phosphorylated by casein kinase II (Cka1p-Cka2p-Ckb1p-Ckb2p) and dephosphorylated by Ptp1p" * Jamie_phos_01_itms_26.11646.11646.3 4.5478 0.3106 96.7 4328.9644 4329.103 4226.1 2 5.929 24.3 2 K.RNPDFEDDDFLGGDFDEDEIDEES*S*EEEEEEKTQK.K * Jamie_phos_01_itms_30.13104.13104.3 4.8712 0.2262 97.1 4171.764 4172.9155 6555.6 3 5.751 22.7 1 R.NPDFEDDDFLGGDFDEDEIDEES*S*EEEEEEKTQK.K * Jamie_phos_01_itms_26.11572.11572.3 4.3886 0.2279 96.4 4300.974 4301.09 4005.1 5 5.237 21.3 1 R.NPDFEDDDFLGGDFDEDEIDEES*S*EEEEEEKTQKK.K Reverse_YDR019C 1 1 8.8% 400 44469 8.8 U GCV1 SGDID:S000002426, Chr IV from 485361-484159, reverse complement, Verified ORF, "T subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of levels of 5,10-methylene-THF in the cytoplasm" * Jamie_phos_01_itms_72.28505.28505.3 3.4903 0.2587 98.6 3594.7144 3598.986 10461.1 31 5.213 17.6 1 D.DNEKTIITDDVVGGQPNLLVSLTGSGVPLANFDTP.T YKL054C 2 2 8.7% 738 83973 5.0 U DEF1 SGDID:S000001537, Chr XI from 338397-336181, reverse complement, Verified ORF, "RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII" * Jamie_phos_01_itms_18.08919.08919.3 4.1618 0.1217 97.7 3817.4043 3816.9734 8698.5 1 4.884 24.2 1 K.EQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEK.V * Jamie_phos_01_itms_8.05021.05021.3 4.465 0.2868 96.8 3694.2844 3694.653 7404.4 1 5.927 25.8 1 K.NNYNYYQTQNGQEQQS*PNQGVAQHSEDSQQK.Q YBR118W 2 2 8.7% 458 50033 9.0 U TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF1; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" YPR080W 2 2 8.7% 458 50033 9.0 U TEF1 SGDID:S000006284, Chr XVI from 700592-701968, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" Jamie_phos_01_itms_35.15037.15037.3 4.0426 0.1526 93.6 3322.2844 3321.8418 9888.0 31 4.644 21.4 1 K.TLLEAIDAIEQPSRPTDKPLRLPLQDVYK.I Jamie_phos_01_itms_10.05800.05800.2 1.9051 0.1274 100.0 1025.8322 1026.2241 4394.7 9 5.406 75.0 1 K.IGGIGTVPVGR.V YLR069C 1 1 8.5% 761 84574 6.9 U MEF1 SGDID:S000004059, Chr XII from 273916-271631, reverse complement, Verified ORF, "Mitochondrial elongation factor involved in translational elongation" * Jamie_phos_01_itms_51.20845.20845.4 3.9913 0.2282 91.6 6965.6167 6964.8066 7142.7 1 4.575 12.5 1 D.YTHKKQSGGAGQYGRVIGTLSPVDDITKGNIFETAIVGGRIPDKYLAACGKGFEEVCEKGPLIGH.R Reverse_YER140W 1 1 8.3% 556 64794 9.8 U YER140W SGDID:S000000942, Chr V from 451560-453230, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_15.07492.07492.4 3.9453 0.2318 96.2 5218.8164 5221.678 7805.1 35 5.28 15.9 1 E.TEIRNEKNYDSHLAIRT*SVDVKGMGGSLLGPVYEEETVVTNFAQDR.F YNL064C 1 1 8.1% 409 44671 6.3 U YDJ1 SGDID:S000005008, Chr XIV from 507098-505869, reverse complement, Verified ORF, "Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein translocation across membranes; member of the DnaJ family" * Jamie_phos_01_itms_70.27623.27623.3 3.4237 0.2586 93.6 3563.4543 3563.8965 5982.6 13 4.657 19.5 1 R.DGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLK.V YNL096C 1 1 7.9% 190 21634 9.9 U RPS7B SGDID:S000005040, Chr XIV from 444317-444174,443828-443400, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Ap; interacts with Kti11p; deletion causes hypersensitivity to zymocin; has similarity to rat S7 and Xenopus S8 ribosomal proteins" * Jamie_phos_01_itms_16.07959.07959.2 3.9866 0.3663 100.0 1627.5322 1626.8907 4838.2 1 6.882 71.4 1 K.ILSQAPSELELQVAK.T YMR242C 1 1 7.9% 178 21236 10.3 U RPL20A SGDID:S000004855, Chr XIII from 754196-754178,753741-753224, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein" YOR312C 1 1 8.0% 174 20713 10.3 U RPL20B SGDID:S000005839, Chr XV from 901176-901170,900762-900245, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similarity to rat L18a ribosomal protein" Jamie_phos_01_itms_21.09868.09868.2 2.3444 0.2248 99.6 1541.2122 1538.7589 9683.0 6 5.008 53.8 1 R.VAAVETLYQDMAAR.H YPR148C 1 1 7.8% 435 49279 4.8 U YPR148C SGDID:S000006352, Chr XVI from 828136-826829, reverse complement, Uncharacterized ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern" * Jamie_phos_01_itms_16.08079.08079.3 6.8543 0.4592 100.0 3865.9744 3865.7427 11972.4 1 7.638 31.8 1 K.TAQTTEAQGADHNEEDEEDEEDEEDDEDLSNLIK.V YGR234W 1 1 7.8% 399 44646 6.3 U YHB1 SGDID:S000003466, Chr VII from 959908-961107, Verified ORF, "Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role in the oxidative and nitrosative stress responses" * Jamie_phos_01_itms_66.26275.26275.3 5.765 0.4148 100.0 3351.4443 3349.762 9792.3 1 7.82 32.5 1 K.EVLGDAATPEIINAWGEAYQAIADIFITVEK.K Reverse_YKL187C 2 2 7.7% 750 81033 5.0 U YKL187C SGDID:S000001670, Chr XI from 91541-89289, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; detectable in highly purified mitochondria" * Jamie_phos_01_itms_85.33907.33907.3 2.5023 0.18 94.9 3107.7544 3104.558 7751.1 10 4.733 21.6 1 T.LLTQALSSSITTNMLTALATMTATQNTSFA.F * Jamie_phos_01_itms_94.37600.37600.2 1.6602 0.1844 91.3 2966.7922 2968.2878 11125.0 291 4.367 18.5 1 S.SLSASVLRSLGDLTETANDSYKLLGNIE.T YBR031W 2 2 7.7% 362 39092 10.6 U RPL4A SGDID:S000000235, Chr II from 300166-301254, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins" YDR012W 2 2 7.7% 362 39062 10.6 U RPL4B SGDID:S000002419, Chr IV from 471850-472938, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins" Jamie_phos_01_itms_8.05085.05085.2 3.0025 0.3083 100.0 1185.0922 1185.266 6753.3 1 5.931 80.0 1 R.SGQGAFGNMCR.G Jamie_phos_01_itms_15.07782.07782.2 3.424 0.3067 100.0 1848.6522 1847.0782 4897.1 1 5.649 50.0 1 K.VGYTLPSHIISTSDVTR.I YKL152C 1 1 7.7% 247 27609 8.8 U GPM1 SGDID:S000001635, Chr XI from 164390-163647, reverse complement, Verified ORF, "Tetrameric phosphoglycerate mutase, mediates the conversion of 3-phosphoglycerate to 2-phosphoglycerate during glycolysis and the reverse reaction during gluconeogenesis" * Jamie_phos_01_itms_32.13776.13776.2 3.3462 0.1529 91.3 2147.132 2144.4294 5394.2 13 4.364 38.9 1 K.YVDPNVLPETESLALVIDR.L Reverse_YIR036C 1 1 7.6% 263 28804 6.4 U YIR036C SGDID:S000001475, Chr IX from 422862-422071, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_42.17601.17601.2 2.133 0.2198 93.1 2237.632 2235.6316 9664.3 185 4.437 26.3 1 L.VAAPVKPDLLSSTKYLQTFR.E YPL240C 4 6 7.5% 709 81406 4.9 U HSP82 SGDID:S000006161, Chr XVI from 98625-96496, reverse complement, Verified ORF, "Cytoplasmic chaperone (Hsp90 family) required for pheromone signaling and negative regulation of Hsf1p; docks with the mitochondrial import receptor Tom70p for preprotein delivery; interacts with co-chaperones Cns1p, Cpr6p, Cpr7p, and Sti1p" Jamie_phos_01_itms_16.08007.08007.2 3.5935 0.3047 100.0 1819.9321 1819.922 6352.3 1 5.854 64.3 1 R.NPSDITQEEYNAFYK.S * Jamie_phos_01_itms_28.12334.12334.2 3.357 0.2199 98.3 2016.0122 2013.165 7997.8 3 4.84 50.0 1 K.LIEAFNEIAEDSEQFEK.F Jamie_phos_01_itms_24.10821.10821.3 4.7725 0.3532 100.0 2512.2244 2511.699 9228.3 1 5.903 40.0 3 K.TLVDITKDFELEETDEEKAER.E Jamie_phos_01_itms_10.05632.05632.2 3.9614 0.2754 100.0 1740.4321 1740.7748 9604.4 1 6.361 80.8 1 K.DFELEETDEEKAER.E Reverse_YJR001W 1 1 7.5% 602 65346 8.1 U AVT1 SGDID:S000003761, Chr X from 436717-438525, Verified ORF, "Vacuolar transporter, imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters" * Jamie_phos_01_itms_57.23081.23081.4 3.4739 0.1772 92.2 4871.2964 4865.881 9872.7 162 4.611 15.2 1 A.ARRKIASAAEDIHQVNMLVDLVSVIPRANLPTKAIPIITMLASIL.G YDR450W 1 1 7.5% 146 17038 10.3 U RPS18A SGDID:S000002858, Chr IV from 1359913-1359959,1360395-1360788, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Bp and has similarity to E. coli S13 and rat S18 ribosomal proteins" YML026C 1 1 7.5% 146 17038 10.3 U RPS18B SGDID:S000004488, Chr XIII from 223828-223782,223380-222987, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similarity to E. coli S13 and rat S18 ribosomal proteins" Jamie_phos_01_itms_8.05211.05211.2 3.1611 0.2864 100.0 1275.2322 1275.358 5515.9 1 5.986 80.0 1 R.AGELTQEELER.I YAL038W 2 2 7.4% 500 54545 7.7 U CDC19 SGDID:S000000036, Chr I from 71787-73289, Verified ORF, "Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration" * Jamie_phos_01_itms_17.08511.08511.2 3.2013 0.2184 99.6 1760.8322 1761.9292 8442.8 2 5.123 53.6 1 K.IENQQGVNNFDEILK.V * Jamie_phos_01_itms_32.13894.13894.2 3.6542 0.2445 100.0 2570.7522 2570.8174 8706.4 3 6.027 33.3 1 R.GVFPFVFEKEPVSDWTDDVEAR.I YMR131C 1 2 7.2% 511 57261 4.6 U RRB1 SGDID:S000004738, Chr XIII from 534697-533162, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p" * Jamie_phos_01_itms_18.08753.08753.3 4.5247 0.3359 100.0 4288.7046 4289.3447 7632.1 2 5.961 20.8 2 K.TLLKDDNEGEDDEEDDEDDVDPVIENENIPLRDTTNR.L YPL266W 1 1 7.2% 318 35951 9.6 U DIM1 SGDID:S000006187, Chr XVI from 39121-40077, Verified ORF, "Essential 18S rRNA dimethylase, responsible for conserved m6(2)Am6(2)A dimethylation in 3'-terminal loop of 18 S rRNA, part of 90S and 40S pre-particles in nucleolus, involved in pre-ribosomal RNA processing" * Jamie_phos_01_itms_71.28164.28164.2 2.2761 0.2415 91.3 2542.9922 2541.9565 9274.6 83 4.36 25.0 1 G.QHILKNPLVAQGIVDKAQIRPSD.V YLR449W 1 2 7.1% 392 43903 4.7 U FPR4 SGDID:S000004441, Chr XII from 1030829-1032007, Verified ORF, "Nuclear protein, putative peptidyl-prolyl cis-trans isomerase (PPIase) with similarity to Fpr3p; overproduction suppresses the growth defect resulting from the absence of E3 ubiquitin-protein ligase Tom1p" * Jamie_phos_01_itms_10.05775.05775.3 6.0044 0.3702 95.0 3424.7644 3421.2202 4972.9 1 6.36 33.3 2 R.GEYYNQDNNDGLEEDES*ES*EQEADVPKR.S YNL178W 1 1 7.1% 240 26503 9.4 U RPS3 SGDID:S000005122, Chr XIV from 302682-303404, Verified ORF, "Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins" * Jamie_phos_01_itms_9.05433.05433.2 3.614 0.3162 100.0 1907.6322 1905.9696 4298.6 2 6.039 62.5 1 K.DYRPAEETEAQAEPVEA.- YML028W 1 1 7.1% 196 21590 5.1 U TSA1 SGDID:S000004490, Chr XIII from 220138-220728, Verified ORF, "Ubiquitous housekeeping thioredoxin peroxidase, reduces reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; mediates redox regulation of the nuclear localization of Yap1p; deletion results in mutator phenotype" * Jamie_phos_01_itms_24.10944.10944.2 2.6781 0.1384 96.8 1565.2522 1563.7478 9050.3 1 4.701 61.5 1 R.DYGVLIEEEGVALR.G YLR175W 1 1 7.0% 483 54705 8.9 U CBF5 SGDID:S000004165, Chr XII from 506136-507587, Verified ORF, "Component of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), probable rRNA pseudouridine synthase, binds to snoRNP Nop10p and also interacts with ribosomal biogenesis protein Nop53p" * Jamie_phos_01_itms_69.27213.27213.4 3.9087 0.1817 97.9 3593.8564 3595.0938 8168.8 162 4.768 19.7 1 Y.EEGIELYDEIVLITTKGEAIAVAIAQMSTVDLAS.C YMR178W 1 1 6.9% 274 31145 6.1 U YMR178W SGDID:S000004790, Chr XIII from 618478-619302, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_21.09781.09781.4 3.0958 0.2171 97.7 2071.3364 2072.3232 2428.0 19 4.865 31.5 1 K.SIVNRVVNNLEGEVISSEL.E Reverse_YNR030W 1 1 6.4% 551 62673 7.1 U ALG12 SGDID:S000005313, Chr XIV from 678801-680456, Verified ORF, "Alpha-1,6-mannosyltransferase localized to the ER; responsible for the addition of the alpha-1,6 mannose to dolichol-linked Man7GlcNAc2, acts in the dolichol pathway for N-glycosylation" * Jamie_phos_01_itms_56.22588.22588.3 3.0144 0.2035 96.9 3755.2744 3759.516 7605.9 84 4.755 17.6 1 L.ASVELRFVIAVLASLFIAANYRGLLVWGLAVNTLP.L YKL060C 2 2 6.4% 359 39621 5.8 U FBA1 SGDID:S000001543, Chr XI from 327131-326052, reverse complement, Verified ORF, "Fructose 1,6-bisphosphate aldolase, a cytosolic enzyme required for glycolysis and gluconeogenesis; catalyzes the conversion of fructose 1,6 bisphosphate into two 3-carbon products: glyceraldehyde-3-phosphate and dihydroxyacetone phosphate" * Jamie_phos_01_itms_7.04626.04626.2 2.9369 0.2731 100.0 1218.4122 1218.3091 6384.2 1 5.777 72.7 1 K.GISNEGQNASIK.G * Jamie_phos_01_itms_13.06795.06795.2 3.0636 0.2248 99.0 1283.5122 1283.424 5712.2 1 4.889 80.0 1 K.SLETFRTTNTL.- YLR390W-A 1 1 6.3% 238 23268 5.9 U CCW14 SGDID:S000006429, Chr XII from 903724-904440, Verified ORF, "Covalently linked cell wall glycoprotein, present in the inner layer of the cell wall" * Jamie_phos_01_itms_21.09982.09982.2 2.6408 0.2977 100.0 1587.7522 1585.8164 8920.7 1 5.629 53.6 1 A.TPPACLLACVAQVGK.S YNL142W 1 1 6.2% 499 53401 6.7 U MEP2 SGDID:S000005086, Chr XIV from 357455-358954, Verified ORF, "Ammonium permease involved in regulation of pseudohyphal growth; belongs to a ubiquitous family of cytoplasmic membrane proteins that transport only ammonium (NH4+); expression is under the nitrogen catabolite repression regulation" * Jamie_phos_01_itms_58.23187.23187.2 1.7353 0.2039 95.4 3474.632 3476.109 10460.2 37 4.578 20.0 1 A.WTVTVTSILLLTMNAIPFLKLRLSADEEELG.T YOL063C 1 1 6.1% 957 109715 5.7 U YOL063C SGDID:S000005424, Chr XV from 210264-207391, reverse complement, Uncharacterized ORF, "Protein required for normal hydroxyurea resistance; not related to the HUS1 checkpoint protein identified in human and fission yeast" * Jamie_phos_01_itms_54.21868.21868.4 2.7802 0.1541 96.8 7108.4966 7102.64 7858.0 52 5.165 12.3 1 S.FQRRYRDTEQRAHLKS*ESQKSWGFHNYVRNVKRLLESAVPGSEDS*PLGYQLSEMHDEF.F Reverse_YJR065C 1 1 6.0% 449 49542 5.8 U ARP3 SGDID:S000003826, Chr X from 559072-557723, reverse complement, Verified ORF, "Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity" * Jamie_phos_01_itms_42.17320.17320.3 3.0539 0.1933 93.4 2953.9443 2953.5015 8627.8 358 4.679 22.1 1 E.GRERLLSQIFLTIDRGAIPINKIASGI.V Reverse_YJL104W 1 1 6.0% 149 16216 9.4 U PAM16 SGDID:S000003640, Chr X from 227244-227693, Verified ORF, "Constituent of the mitochondrial import motor associated with the presequence translocase, along with Ssc1p, Tim44p, Mge1p, and Pam18p; has similarity to J-domain containing proteins" * Jamie_phos_01_itms_19.09031.09031.2 1.6681 0.2286 96.0 962.03217 959.13074 2701.7 28 4.644 75.0 1 F.VQTGTIIVQ.I YNL240C 1 1 5.9% 491 54151 7.6 U NAR1 SGDID:S000005184, Chr XIV from 199978-198503, reverse complement, Verified ORF, "Nuclear architecture related protein; component of the cytosolic iron-sulfur (FeS) protein assembly machinery, required for maturation of cytosolic and nuclear FeS proteins; homologous to human Narf" * Jamie_phos_01_itms_49.19891.19891.2 1.7963 0.1593 90.3 3257.8523 3256.7043 8248.5 7 4.305 23.2 1 P.GSQMIVLEGRNSDIVEYRLLHDDRIIAAA.S YLR167W 1 1 5.9% 152 17216 9.9 U RPS31 SGDID:S000004157, Chr XII from 498949-499407, Verified ORF, "Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B" * Jamie_phos_01_itms_7.04665.04665.2 2.516 0.297 100.0 1077.9122 1078.1791 3595.6 14 5.365 75.0 1 K.CHSVYKVNA.- YNL188W 2 2 5.8% 433 50653 9.3 U KAR1 SGDID:S000005132, Chr XIV from 286309-287610, Verified ORF, "Essential protein involved in karyogamy during mating and in spindle pole body duplication during mitosis, localizes to the half-bridge of the spindle pole body, interacts with Spc72p during karyogamy, also interacts with Cdc31p" * Jamie_phos_01_itms_19.09249.09249.3 3.888 0.2641 97.8 2845.4343 2846.17 6876.5 1 5.552 30.2 1 R.KQLGKPLPLPYLNS*PNSDSTPTLQR.K * Jamie_phos_01_itms_23.10527.10527.3 3.786 0.4046 95.8 2717.7244 2717.9958 8741.2 5 6.228 29.3 1 K.QLGKPLPLPYLNS*PNSDSTPTLQR.K YOR006C 1 1 5.8% 313 35686 5.8 U YOR006C SGDID:S000005532, Chr XV from 338621-337680, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_19.09199.09199.2 2.524 0.3013 100.0 1972.2722 1969.887 6977.6 1 5.528 44.1 1 N.RRGNGSQSDTSESEENSE.Q YKR071C 1 1 5.7% 348 38543 5.3 U DRE2 SGDID:S000001779, Chr XI from 575622-574576, reverse complement, Verified ORF, "Protein of unknown function; mutation displays synthetic lethal interaction with the pol3-13 allele of CDC2" * Jamie_phos_01_itms_17.08295.08295.2 3.2417 0.246 97.8 2285.152 2284.173 7548.7 14 5.337 34.2 1 R.VVDDLIEDS*DDDDFSSDSSK.A Reverse_YMR018W 1 1 5.6% 514 59065 8.4 U YMR018W SGDID:S000004620, Chr XIII from 310207-311751, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_85.33925.33925.3 2.7187 0.2258 90.8 3220.0745 3224.5198 8602.0 15 4.573 21.4 1 T.RADRAASDNTQFDSFKGLNNWKLGLGNNI.K Reverse_YBR050C 1 1 5.6% 338 38747 8.1 U REG2 SGDID:S000000254, Chr II from 338197-337181, reverse complement, Verified ORF, "Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease" * Jamie_phos_01_itms_7.04822.04822.2 2.3994 0.1513 94.1 2208.7322 2206.3403 6027.0 61 4.476 30.6 1 D.LESKSCPRQEDTSNLRTSP.L YJR064W 1 2 5.3% 562 61914 5.5 U CCT5 SGDID:S000003825, Chr X from 555828-557516, Verified ORF, "Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo" * Jamie_phos_01_itms_69.27318.27318.3 4.3878 0.2241 98.8 3103.1643 3100.4473 11074.2 1 5.009 27.6 2 K.SQDDEIGDGTTGVVVLASALLDQALELIQK.G YDR432W 1 1 5.3% 414 45407 5.5 U NPL3 SGDID:S000002840, Chr IV from 1328773-1330017, Verified ORF, "RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm; phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs" * Jamie_phos_01_itms_44.18181.18181.2 3.3611 0.3284 100.0 2439.2322 2438.6501 8244.6 3 6.214 35.7 1 R.DFDGTGALEFPSEEILVEALER.L YGL076C 1 1 5.3% 244 27638 10.1 U RPL7A SGDID:S000003044, Chr VII from 365999-365989,365529-365436,364967-364338, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" YPL198W 1 1 5.3% 244 27696 10.1 U RPL7B SGDID:S000006119, Chr XVI from 173151-173161,173571-173664,174072-174701, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" Jamie_phos_01_itms_7.04716.04716.2 3.2605 0.2608 100.0 1573.1921 1573.6592 6009.3 1 5.811 62.5 1 R.NAAYQKEYETAER.N YLR044C 1 1 5.2% 563 61495 6.2 U PDC1 SGDID:S000004034, Chr XII from 234082-232391, reverse complement, Verified ORF, "Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde; subject to glucose-, ethanol-, and autoregulation; involved in amino acid catabolism" * Jamie_phos_01_itms_45.18403.18403.3 3.4899 0.2437 98.7 3272.7544 3269.74 8350.6 3 5.133 22.3 1 K.QVNVNTVFGLPGDFNLSLLDKIYEVEGMR.W YMR014W 1 1 5.2% 519 60054 8.8 U BUD22 SGDID:S000004616, Chr XIII from 298867-300426, Verified ORF, "Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern" * Jamie_phos_01_itms_8.04890.04890.3 3.5781 0.3066 96.5 3033.0244 3032.9756 5458.5 384 5.206 23.1 1 K.TANANQTHSNIDYDT*DDGNEKNAIDSK.S YHR064C 1 1 5.2% 538 58238 5.1 U SSZ1 SGDID:S000001106, Chr VIII from 227143-225527, reverse complement, Verified ORF, "Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex that is bound to the ribosome via the Zuo1p subunit; also involved in pleiotropic drug resistance via sequential activation of PDR1 and PDR5" * Jamie_phos_01_itms_19.09100.09100.3 4.36 0.3353 97.7 3452.2444 3448.3699 6871.8 1 5.569 31.5 1 K.TLEPIPKEENAEEDDES*EWS*DDEPEVVR.E Reverse_YIL083C 1 1 5.2% 365 41893 8.3 U YIL083C SGDID:S000001345, Chr IX from 204650-203553, reverse complement, Uncharacterized ORF, "Homolog to human PPCS" * Jamie_phos_01_itms_98.39805.39805.2 1.6185 0.0709 91.8 2359.672 2360.7302 8449.2 7 4.397 36.1 1 K.EMYKDYLKKNKLVNEAFEP.K YBR117C 1 1 5.0% 681 75029 6.1 U TKL2 SGDID:S000000321, Chr II from 476431-474386, reverse complement, Verified ORF, "Transketolase, similar to Tkl1p; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids" * Jamie_phos_01_itms_56.22552.22552.2 1.6492 0.2216 96.0 3541.8523 3543.8428 7759.8 196 4.631 18.2 1 G.QGISNAVGMAIAQANFAATYNEDGFPISDSYTFA.I YGL140C 1 1 4.8% 1219 137476 8.1 U YGL140C SGDID:S000003108, Chr VII from 245017-241358, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_30.12989.12989.4 3.0536 0.1281 95.1 6492.7764 6497.876 6888.6 113 4.727 10.9 1 E.AVTGFDNFINGKSNPMNTRRNRTPFDGTSIISEGNESLQSTNSNESQISPDSTRSYEPE.C YJL034W 2 2 4.8% 682 74468 4.9 U KAR2 SGDID:S000003571, Chr X from 381243-383291, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p" Jamie_phos_01_itms_19.08985.08985.3 6.8429 0.4714 100.0 3589.4343 3588.467 8843.7 1 8.639 31.2 1 I.TSKLYGGADGSGAADYDDEDEDDDGDYFEHDEL.- Jamie_phos_01_itms_22.10241.10241.2 4.5125 0.5394 100.0 3271.4922 3272.1096 9049.6 1 9.986 36.2 1 K.LYGGADGSGAADYDDEDEDDDGDYFEHDEL.- YOR140W 1 1 4.7% 766 83317 8.7 U SFL1 SGDID:S000005666, Chr XV from 586981-589281, Verified ORF, "Transcription repressor involved in regulation of flocculation-related genes, inhibits transcription by recruiting general corepressor Cyc8p-Tup1p to different promoters; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p" * Jamie_phos_01_itms_27.11898.11898.3 3.8662 0.4358 96.4 3170.8442 3169.17 7713.5 6 5.246 20.7 1 E.ETVSAPAPAS*T*PAPAGTDVGSGGAAAGIANAGAEGG.D YJL036W 1 1 4.7% 423 49002 6.5 U SNX4 SGDID:S000003573, Chr X from 378741-380012, Verified ORF, "Sorting nexin, involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the trans-Golgi network and in cytoplasm to vacuole transport; contains a PX domain; forms complex with Snx41p and Atg20p" * Jamie_phos_01_itms_59.23812.23812.2 2.4719 0.1627 99.6 2305.872 2305.7314 8902.4 2 5.071 36.8 1 R.FPTCIIPPLPDKKVFQYIAG.D YJL137C 1 1 4.7% 380 44546 6.0 U GLG2 SGDID:S000003673, Chr X from 156045-154903, reverse complement, Verified ORF, "Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin" * Jamie_phos_01_itms_64.25531.25531.2 1.8875 0.0682 90.4 2203.412 2205.4045 8463.8 163 4.329 29.4 1 P.CLQDLLNHGKRENQKHVD.L Reverse_YPL066W 1 1 4.6% 479 54894 9.4 U YPL066W SGDID:S000005987, Chr XVI from 426230-427669, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_104.44137.44137.2 2.2972 0.0635 91.1 2704.8123 2705.138 9273.3 6 4.36 28.6 1 S.TNKIRGFNKYFKKAFKATQREQ.L Reverse_YJL121C 1 1 4.6% 238 25967 6.3 U RPE1 SGDID:S000003657, Chr X from 191010-190294, reverse complement, Verified ORF, "D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress" * Jamie_phos_01_itms_5.03595.03595.2 1.8233 0.231 93.8 1171.6721 1172.2401 9016.2 27 4.475 60.0 1 K.KETNSADGPRP.V Reverse_YIL128W 1 1 4.5% 1032 117882 5.9 U MET18 SGDID:S000001390, Chr IX from 113806-116904, Verified ORF, "DNA repair and TFIIH regulator, required for both nucleotide excision repair (NER) and RNA polymerase II (RNAP II) transcription; possible role in assembly of a multiprotein complex(es) required for NER and RNAP II transcription" * Jamie_phos_01_itms_52.21145.21145.3 3.7141 0.2956 92.8 5276.3945 5271.995 6815.0 211 5.013 13.3 1 S.NYKHPLSLSLLLPVITSVHETILTHHKDTT*DKLTELASVRVEPDPM.D YGL008C 3 3 4.5% 918 99619 5.1 U PMA1 SGDID:S000002976, Chr VII from 482671-479915, reverse complement, Verified ORF, "Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plasma membrane potential; part of the P2 subgroup of cation-transporting ATPases" * Jamie_phos_01_itms_23.10612.10612.2 4.964 0.4146 100.0 2482.8523 2481.7156 6108.2 1 7.474 45.2 1 R.PVPEEYLQTDPSYGLTSDEVLK.R Jamie_phos_01_itms_8.05028.05028.2 2.5929 0.2297 98.9 2293.8123 2295.3806 7702.1 94 4.952 33.3 1 K.TVEEDHPIPEDVHENYENK.V Jamie_phos_01_itms_8.05062.05062.3 4.0905 0.2415 97.7 2296.0745 2295.3806 9938.1 1 4.899 44.4 1 K.TVEEDHPIPEDVHENYENK.V YJR124C 1 1 4.5% 448 49664 7.6 U YJR124C SGDID:S000003885, Chr X from 654153-652807, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_106.45015.45015.2 1.6713 0.1796 90.5 2234.372 2236.6846 10719.0 17 4.327 31.6 1 I.TADLILACMFLGVDAKIKKQ.M Reverse_YPL203W 1 1 4.5% 380 44219 7.2 U TPK2 SGDID:S000006124, Chr XVI from 166255-167397, Verified ORF, "Subunit of cytoplasmic cAMP-dependent protein kinase, which contains redundant catalytic subunits Tpk1p, Tpk2p, and Tpk3p and regulatory subunit Bcy1p; promotes vegetative growth in response to nutrients; activates filamentous growth" * Jamie_phos_01_itms_102.42997.42997.2 1.5712 0.2192 95.7 1990.1721 1989.3214 6041.4 124 4.625 25.0 1 K.SLLDVVDPHFYPPYVVK.G YJL045W 1 1 4.4% 634 69383 7.4 U YJL045W SGDID:S000003581, Chr X from 355940-357844, Uncharacterized ORF, "Similar to SDH1" * Jamie_phos_01_itms_13.07039.07039.3 3.2365 0.2865 96.6 3116.2744 3112.1973 6417.2 31 5.198 23.1 1 F.SCTSAHTCTGDGNAMVS*RAGFPLEDLEF.V Reverse_YMR155W 1 1 4.4% 547 60044 8.1 U YMR155W SGDID:S000004764, Chr XIII from 568550-570193, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_75.29811.29811.2 2.1206 0.1464 94.9 2646.4922 2644.9507 8150.4 31 4.519 26.1 1 F.IASCVSINKFSKSARLSPDEISSF.D YLR197W 1 1 4.4% 504 56864 8.9 U SIK1 SGDID:S000004187, Chr XII from 546099-547613, Verified ORF, "Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects" * Jamie_phos_01_itms_27.12108.12108.2 2.6948 0.1557 98.3 2219.412 2218.3794 7061.9 337 4.831 31.0 1 K.GAAEALENANDISEGLVSESLK.A YER165W 1 1 4.3% 577 64344 6.0 U PAB1 SGDID:S000000967, Chr V from 510368-512101, Verified ORF, "Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G" * Jamie_phos_01_itms_24.11055.11055.2 3.729 0.3939 100.0 2787.7922 2787.9478 10104.1 1 6.737 35.4 1 K.NLDDSVDDEKLEEEFAPYGTITSAK.V Reverse_YJR070C 1 1 4.3% 325 36165 4.9 U LIA1 SGDID:S000003831, Chr X from 570512-569535, reverse complement, Verified ORF, "Protein with a possible role in microtubule function; complements S. pombe mmd1 mutation affecting mitochondrial distribution although not required for this process in S. cerevisiae; binds to Hyp2p (eIF5A); contains HEAT-like repeats" * Jamie_phos_01_itms_9.05543.05543.3 1.7823 0.1112 97.6 1384.5543 1380.5377 2227.2 443 5.003 34.6 1 S.SEASFGTALALIAE.D Reverse_YDR014W 1 1 4.2% 647 74722 5.9 U RAD61 SGDID:S000002421, Chr IV from 474043-475986, Verified ORF, "Protein of unknown function; mutation confers radiation sensitivity" * Jamie_phos_01_itms_60.23992.23992.2 1.7546 0.2603 93.5 2993.5522 2993.306 7781.9 1 4.475 26.9 1 D.DDSFEVDSSSPLGKNSRFPTRLVPGRK.G Reverse_YOR042W 1 1 4.1% 411 46870 4.8 U CUE5 SGDID:S000005568, Chr XV from 408424-409659, Uncharacterized ORF, "Protein containing a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern" * Jamie_phos_01_itms_7.04579.04579.2 2.9756 0.1989 95.4 1987.3322 1987.3186 10750.2 22 4.595 40.6 1 Q.RRRAPAEPNKRVPQTPL.E YOR063W 1 1 4.1% 387 43758 10.3 U RPL3 SGDID:S000005589, Chr XV from 444687-445850, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to E. coli L3 and rat L3 ribosomal proteins; involved in the replication and maintenance of killer double stranded RNA virus" * Jamie_phos_01_itms_7.04769.04769.2 4.0119 0.3448 100.0 1639.2522 1639.6757 5660.3 1 6.58 66.7 1 R.VGKGDDEANGATSFDR.T YBR283C 1 1 3.9% 490 53312 8.1 U SSH1 SGDID:S000000487, Chr II from 770411-768939, reverse complement, Verified ORF, "Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential" * Jamie_phos_01_itms_31.13524.13524.2 2.4461 0.1551 95.7 1989.5122 1992.3813 6708.4 30 4.624 36.1 1 A.MIINTVVIATNLVADTFGV.S YGL075C 1 1 3.9% 387 44585 8.3 U MPS2 SGDID:S000003043, Chr VII from 368091-366928, reverse complement, Verified ORF, "Essential membrane protein localized at the nuclear envelope and spindle pole body (SPB), required for insertion of the newly duplicated SPB into the nuclear envelope; potentially phosphorylated by Cdc28p" * Jamie_phos_01_itms_12.06609.06609.2 3.4057 0.2908 97.7 1595.6322 1595.6604 6925.4 2 5.366 60.7 1 R.TSDPGS*PLVTGIDQK.A YDR502C 1 1 3.9% 384 42256 5.4 U SAM2 SGDID:S000002910, Chr IV from 1454454-1453300, reverse complement, Verified ORF, "S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)" YLR180W 1 1 3.9% 382 41818 5.2 U SAM1 SGDID:S000004170, Chr XII from 515264-516412, Verified ORF, "S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)" Jamie_phos_01_itms_13.07059.07059.2 3.4803 0.3387 100.0 1447.3522 1445.6182 7154.3 1 6.033 71.4 1 R.FVIGGPQGDAGLTGR.K YER006W 1 1 3.8% 520 57709 8.9 U NUG1 SGDID:S000000808, Chr V from 162722-164284, Verified ORF, "GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits from the nucleus" * Jamie_phos_01_itms_23.10648.10648.2 3.4894 0.3228 100.0 2340.2722 2339.3845 7646.0 1 6.591 39.5 1 I.DYNIDFYGEDVEGESELEKS.R Reverse_YOR311C 1 1 3.8% 290 32840 8.8 U HSD1 SGDID:S000005838, Chr XV from 899923-899051, reverse complement, Verified ORF, "Endoplasmic reticulum (ER)-resident membrane protein, overproduction induces enlargement of ER-like membrane structures and suppresses a temperature-sensitive sly1 mutation" * Jamie_phos_01_itms_64.25660.25660.2 1.5935 0.2048 99.3 1241.7522 1244.4795 5090.6 12 4.982 55.0 1 S.KLHIETVPVHA.D Reverse_YJL093C 1 1 3.6% 691 77408 7.1 U TOK1 SGDID:S000003629, Chr X from 256728-254653, reverse complement, Verified ORF, "Outward-rectifier potassium channel of the plasma membrane with two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin" * Jamie_phos_01_itms_53.21345.21345.2 2.2825 0.2296 97.1 2564.8323 2562.0393 8848.7 12 4.714 27.1 1 S.TSIDFLLDGVTSLIAGMLPVAGLAW.I YEL046C 1 1 3.6% 387 42815 6.3 U GLY1 SGDID:S000000772, Chr V from 68792-67629, reverse complement, Verified ORF, "Threonine aldolase, catalyzes the cleavage of L-allo-threonine and L-threonine to glycine; involved in glycine biosynthesis" * Jamie_phos_01_itms_10.05759.05759.2 4.1897 0.4192 100.0 1572.2922 1572.5394 7126.0 1 6.398 80.8 1 R.SES*TEVDVDGNAIR.E Reverse_YMR172W 1 1 3.5% 719 79416 8.0 U HOT1 SGDID:S000004783, Chr XIII from 605980-608139, Verified ORF, "Transcription factor required for the transient induction of glycerol biosynthetic genes GPD1 and GPP2 in response to high osmolarity; targets Hog1p to osmostress responsive promoters; has similarity to Msn1p and Gcr1p" * Jamie_phos_01_itms_105.44779.44779.3 3.0546 0.2344 95.2 2797.1343 2792.7344 9076.6 161 5.079 25.0 1 D.HFS*NS*ASTVGSHISSNTYNMSTTSN.H Reverse_YLR188W 1 1 3.5% 695 75950 9.8 U MDL1 SGDID:S000004178, Chr XII from 528302-530389, Verified ORF, "Half-type ATP-binding cassette (ABC) transporter of the inner mitochondrial membrane, mediates export of peptides generated upon proteolysis of mitochondrial proteins, plays a role in the regulation of cellular resistance to oxidative stress" * Jamie_phos_01_itms_92.36629.36629.2 2.2318 0.2049 98.3 2525.0322 2525.0122 5779.7 2 4.872 32.6 1 I.IRSANAVAGIIFVAGLATFFQKKT.F YNL251C 1 1 3.5% 575 63859 9.2 U NRD1 SGDID:S000005195, Chr XIV from 174316-172589, reverse complement, Verified ORF, "RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit (Rpo21p), required for transcription termination and 3' end maturation of nonpolyadenylated RNAs" * Jamie_phos_01_itms_89.35383.35383.2 1.9994 0.2301 97.9 2440.2522 2437.4492 8362.5 2 5.333 34.2 1 Q.DDDFQNFVATLES*FKDLKS*G.I YAL022C 1 1 3.5% 517 58317 5.1 U FUN26 SGDID:S000000020, Chr I from 110431-108878, reverse complement, Verified ORF, "Nucleoside transporter with broad nucleoside selectivity; localized to intracellular membranes" * Jamie_phos_01_itms_31.13377.13377.2 2.2905 0.1024 94.9 1971.6721 1968.9917 9421.8 9 4.514 35.3 1 S.SSSGDEEHNGSVIVDLCY.M YDL182W 1 1 3.5% 428 47099 7.3 U LYS20 SGDID:S000002341, Chr IV from 133438-134724, Verified ORF, "Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; highly similar to the other isozyme, Lys21p" * Jamie_phos_01_itms_11.06235.06235.2 2.7828 0.3125 93.9 1708.1522 1708.8253 6844.0 38 5.283 46.4 1 K.NFHAEVST*PQVLSAK.K Reverse_YGL245W 1 1 3.4% 708 80843 7.5 U GUS1 SGDID:S000003214, Chr VII from 39023-41149, Verified ORF, "Glutamyl-tRNA synthetase (GluRS), forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; complex formation increases the catalytic efficiency of both tRNA synthetases and ensures their correct localization to the cytoplasm" * Jamie_phos_01_itms_52.21189.21189.2 1.9399 0.1666 92.8 2704.652 2705.9502 8405.2 149 4.435 23.9 1 I.IVNGWDMLTVEEDVNIVDADDKDV.V Reverse_YNL101W 1 1 3.4% 713 80026 9.3 U AVT4 SGDID:S000005045, Chr XIV from 435001-437142, Verified ORF, "Vacuolar transporter, exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters" * Jamie_phos_01_itms_78.30936.30936.3 3.2038 0.2549 90.0 2990.3044 2986.3767 10755.5 39 4.987 25.0 1 V.LIY*YCWYSYIGFFALMSVSFFLGG.N Reverse_YHR207C 1 1 3.4% 526 60547 6.5 U SET5 SGDID:S000001250, Chr VIII from 516485-514905, reverse complement, Verified ORF, "Zinc-finger protein of unknown function, contains one canonical and two unusual fingers in unusual arrangements; deletion enhances replication of positive-strand RNA virus" * Jamie_phos_01_itms_42.17653.17653.2 1.7718 0.1782 93.6 1953.6322 1952.8999 8923.6 152 5.286 32.4 1 G.NET*GNHVASQDSDNLTGI.K YCR012W 1 1 3.4% 416 44738 7.6 U PGK1 SGDID:S000000605, Chr III from 137743-138993, Verified ORF, "3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis" * Jamie_phos_01_itms_19.08986.08986.2 3.5903 0.316 100.0 1580.5122 1580.7319 8628.8 1 6.029 69.2 1 K.VLENTEIGDSIFDK.A Reverse_YHL050C 1 1 3.3% 697 79026 6.6 U YHL050C SGDID:S000001042, Chr VIII from 3310-2670,1897-445, reverse complement, Uncharacterized ORF, "Protein of unknown function, potential Cdc28p substrate" * Jamie_phos_01_itms_83.32751.32751.2 2.1889 0.1999 98.6 2294.0322 2294.5242 10595.2 2 4.881 31.8 1 A.TTTASTRVNTSATTTANTGLPVK.S YPL105C 1 1 3.2% 849 94356 7.8 U YPL105C SGDID:S000006026, Chr XVI from 355409-352860, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_96.38838.38838.2 1.2102 0.3396 91.2 3070.152 3067.1663 7353.2 57 5.169 17.3 1 S.SENTATSIT*TNLAPWANKKPEGAVY*NQ.I YFR006W 1 1 3.2% 535 61754 6.2 U YFR006W SGDID:S000001902, Chr VI from 156139-157746, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_64.25311.25311.2 1.7929 0.0417 91.1 2223.612 2225.5327 9795.0 111 4.355 31.2 1 P.NYDDPDPMFRYLRIRRP.L YPL217C 1 1 3.0% 1183 135571 6.8 U BMS1 SGDID:S000006138, Chr XVI from 143170-139619, reverse complement, Verified ORF, "Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits and for processing of the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, has similarity to Tsr1p" * Jamie_phos_01_itms_15.07649.07649.3 5.3226 0.3716 96.2 4089.9243 4090.0945 7966.3 1 6.212 25.7 1 R.IYGKPVQEEDADIDNLPS*DEEPYTNDDDVQDSEPR.M YPL189W 1 1 3.0% 609 71289 9.5 U GUP2 SGDID:S000006110, Chr XVI from 189153-190982, Verified ORF, "Probable membrane protein with a possible role in proton symport of glycerol; member of the MBOAT family of putative membrane-bound O-acyltransferases; Gup1p homolog" * Jamie_phos_01_itms_69.27505.27505.2 2.111 0.2239 92.3 2094.892 2095.566 10355.3 27 4.431 32.4 1 D.TPLQQAMIALFNLNIMYL.K Reverse_YDR291W 1 1 2.9% 1077 123549 6.7 U YDR291W SGDID:S000002699, Chr IV from 1039722-1042955, Uncharacterized ORF, "Putative DNA helicase" * Jamie_phos_01_itms_74.29326.29326.3 1.7781 0.1799 91.4 3636.0544 3636.8906 5635.6 10 4.603 15.8 1 F.QDEEGGRLSVCKSPWPLFRNSAHYGDQNHHL.R Reverse_YPL231W 1 1 2.8% 1887 206945 5.4 U FAS2 SGDID:S000006152, Chr XVI from 108652-114315, Verified ORF, "Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains beta-ketoacyl reductase and beta-ketoacyl synthase activities" * Jamie_phos_01_itms_97.39348.39348.4 2.6427 0.2138 93.0 5694.9365 5700.4243 8880.2 207 4.615 13.1 1 E.SRGLHKMMENITASENKDNAKTSTGHFSAVGLDDITLGYTALAGRLPAIRPDR.K Reverse_YEL070W 1 1 2.8% 502 56470 6.2 U YEL070W SGDID:S000000796, Chr V from 19589-21097, Uncharacterized ORF, "Deletion suppressor of mpt5 mutation" Reverse_YNR073C 1 1 2.8% 502 56470 6.2 U YNR073C SGDID:S000005356, Chr XIV from 776300-774792, reverse complement, Uncharacterized ORF, "Hypothetical protein" Jamie_phos_01_itms_96.38652.38652.2 1.8741 0.1129 90.1 1659.8121 1656.8319 5985.1 10 4.297 42.3 1 G.NQPMNDCSMITFPT.L YBR287W 1 1 2.8% 427 47506 4.9 U YBR287W SGDID:S000000491, Chr II from 776567-777850, Uncharacterized ORF, "Protein of unknown function; mutation results in a zinc sensitive phenotype" * Jamie_phos_01_itms_70.27772.27772.3 2.6057 0.2468 94.2 1774.6444 1770.8223 5683.0 1 5.023 47.7 1 I.WQKS*CT*VFERIR.A Reverse_YNL130C 1 1 2.8% 393 44829 6.6 U CPT1 SGDID:S000005074, Chr XIV from 380833-380784,380691-379560, reverse complement, Verified ORF, "Cholinephosphotransferase, required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription" * Jamie_phos_01_itms_22.10216.10216.3 1.3204 0.2751 95.9 1328.7544 1332.369 1746.1 460 4.749 40.0 1 H.NSLFSRDDSQY.K Reverse_YHR195W 1 1 2.8% 321 36421 5.2 U NVJ1 SGDID:S000001238, Chr VIII from 490747-491712, Verified ORF, "Nuclear envelope protein that interacts with the vacuolar membrane protein Vac8p to promote formation of nucleus-vacuole junctions during piecemeal microautophagy of the nucleus (PMN)" * Jamie_phos_01_itms_11.06067.06067.2 1.8448 0.118 90.8 950.97217 950.1258 2834.1 281 4.346 56.2 1 V.SLGLSFIGR.V Reverse_YKL105C 1 1 2.7% 1132 125593 5.8 U YKL105C SGDID:S000001588, Chr XI from 242227-238829, reverse complement, Uncharacterized ORF, "Putative protein of unknown function" * Jamie_phos_01_itms_71.27963.27963.2 1.9986 0.1677 98.9 3117.2522 3119.3203 8954.1 2 4.953 23.3 1 T.KTNSATKGTSSDINPSTEISYISSSTSSPVA.S YMR309C 1 1 2.7% 812 93204 5.0 U NIP1 SGDID:S000004926, Chr XIII from 895425-892987, reverse complement, Verified ORF, "Subunit of the eukaryotic translation initiation factor 3 (eIF3), involved in the assembly of preinitiation complex and start codon selection" * Jamie_phos_01_itms_55.22015.22015.2 3.6523 0.2744 100.0 2399.0723 2396.6104 7898.1 44 5.77 31.0 1 K.DQLDSADYVDNLIDGLSTILSK.Q Reverse_YJL090C 1 1 2.6% 764 87241 9.0 U DPB11 SGDID:S000003626, Chr X from 264967-262673, reverse complement, Verified ORF, "Essential BRCT repeat protein, required on the prereplicative complex at replication origins for loading DNA polymerases to initiate DNA synthesis, also required for S/M checkpoint control" * Jamie_phos_01_itms_24.11074.11074.2 2.3715 0.3506 92.5 2393.372 2393.3123 5789.1 23 5.23 31.6 1 Q.GQDDDDNHSSTDKIVFNQY*N.Y Reverse_YDR219C 1 1 2.6% 465 53168 8.7 U YDR219C SGDID:S000002627, Chr IV from 906846-905449, reverse complement, Uncharacterized ORF, "Mitochondria-associated F-box protein involved in maintenance of normal mitochondrial morphology" * Jamie_phos_01_itms_16.08045.08045.2 2.2185 0.1011 92.6 1312.9521 1312.5613 7192.3 2 4.433 68.2 1 Y.GRSVSRRGVKPL.I YGL094C 1 1 2.5% 1115 127039 6.7 U PAN2 SGDID:S000003062, Chr VII from 334468-331121, reverse complement, Verified ORF, "Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes" * Jamie_phos_01_itms_89.35563.35563.2 1.771 0.2386 100.0 3019.4722 3016.4822 9847.7 79 5.661 24.1 1 L.HPLLPTVMIVASSSGSFDFIDLSNPTLR.T YPL019C 1 1 2.5% 835 96553 7.4 U VTC3 SGDID:S000005940, Chr XVI from 517016-514509, reverse complement, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion" * Jamie_phos_01_itms_13.06741.06741.2 3.1568 0.3534 97.6 2451.9521 2453.4058 4176.9 1 5.388 45.0 1 R.HVIADLEDHES*S*DEEGTALPK.K YDL164C 1 1 2.5% 755 84828 7.5 U CDC9 SGDID:S000002323, Chr IV from 167255-164988, reverse complement, Verified ORF, "DNA ligase found in the nucleus and mitochondria, an essential enzyme that joins Okazaki fragments during DNA replication; also acts in nucleotide excision repair, base excision repair, and recombination" * Jamie_phos_01_itms_89.35393.35393.2 2.1309 0.2716 90.0 2062.672 2061.145 7039.3 18 5.116 38.9 1 K.LKQTAVTHTVAAPS*SMGS*N.F YAL005C 1 1 2.5% 642 69768 5.1 U SSA1 SGDID:S000000004, Chr I from 141433-139505, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall" YLL024C 1 1 2.5% 639 69470 5.1 U SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall" YBL075C 1 1 2.5% 649 70547 5.2 U SSA3 SGDID:S000000171, Chr II from 86446-84497, reverse complement, Verified ORF, "ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm" Jamie_phos_01_itms_8.05045.05045.2 3.5224 0.3776 100.0 1676.2722 1676.6964 7643.1 1 6.83 63.3 1 K.ATAGDTHLGGEDFDNR.L YDR098C-B 2 2 2.4% 1755 198594 8.4 U YDR098C-B SGDID:S000007391, Chr IV from 651121-649817,649815-645853, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YGR038C-B 2 2 2.4% 1755 198520 8.2 U YGR038C-B SGDID:S000007408, Chr VII from 567471-566167,566165-562203, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YER138C 2 2 2.4% 1755 198561 8.1 U YER138C SGDID:S000000940, Chr V from 449020-447719,447717-443752, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR365W-B 2 2 2.4% 1755 198658 8.0 U YDR365W-B SGDID:S000007401, Chr IV from 1206987-1208291,1208293-1212255, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR316W-B 2 2 2.4% 1755 198526 8.2 U YDR316W-B SGDID:S000007399, Chr IV from 1096059-1097363,1097365-1101327, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR261C-D 2 2 2.6% 1604 181660 7.5 U YDR261C-D SGDID:S000007395, Chr IV from 992343-991039,991037-987528, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR210C-D 2 2 2.4% 1755 198838 8.4 U YDR210C-D SGDID:S000007410, Chr IV from 883922-882618,882616-878654, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" Jamie_phos_01_itms_7.04539.04539.2 3.3897 0.2769 91.1 1708.4521 1706.7257 6344.0 1 5.176 70.0 1 A.SSAVPENPHHAS*PQPA.S Jamie_phos_01_itms_7.04845.04845.3 3.5313 0.2519 94.1 2872.4043 2871.818 3756.9 12 5.03 26.0 1 R.HSDS*YSENETNHTNVPISSTGGTNNK.T YIL048W 1 1 2.4% 1151 130218 6.5 U NEO1 SGDID:S000001310, Chr IX from 261436-264891, Verified ORF, "Protein involved in the retrograde transport from the Golgi complex to the ER and the endosomal membrane traffic; putative aminophospholipid translocase; member of the highly conserved Drs2 family of P-type ATPases" * Jamie_phos_01_itms_28.12544.12544.3 3.388 0.3014 98.8 3041.7244 3043.3672 5608.5 5 5.108 23.1 1 R.VACPLTQNLSENDLINRISITASAPEKS.I YOR018W 1 1 2.4% 837 92349 8.8 U ROD1 SGDID:S000005544, Chr XV from 364368-366881, Verified ORF, "Membrane protein; overexpression confers resistance to the GST substrate o-dinitrobenzene as well as to zinc and calcium; contains 2 PY motifs, which are required for Rod1p interaction with Rsp5p, a hect-type ubiquitin ligase" * Jamie_phos_01_itms_53.21293.21293.2 1.9003 0.1246 98.9 2071.7722 2074.3813 9095.7 1 4.948 34.2 1 E.FPFSAIIPGSLVESVEGLPN.A Reverse_YKR027W 1 1 2.4% 765 88044 5.7 U YKR027W SGDID:S000001735, Chr XI from 491007-493304, Uncharacterized ORF, "The authentic, non-tagged protein was localized to the mitochondria" * Jamie_phos_01_itms_44.18173.18173.2 2.1059 0.2293 90.6 1950.1921 1949.2257 6373.3 1 4.332 41.2 1 F.AIPMSVSSADIGTIYFFE.G YML123C 1 1 2.4% 587 64382 6.4 U PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p" * Jamie_phos_01_itms_8.04899.04899.2 2.8067 0.347 96.6 1546.6322 1546.5907 3907.7 1 5.748 69.2 1 R.ASTAVES*LDNHPPK.A YKL222C 1 1 2.3% 705 82248 8.1 U YKL222C SGDID:S000001705, Chr XI from 5621-3504, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; similar to transcriptional regulators from the zinc cluster (binuclear cluster) protein family; null mutant is sensitive to caffeine" * Jamie_phos_01_itms_80.31570.31570.2 1.7885 0.1653 91.8 1749.8322 1747.088 8723.9 1 4.372 46.7 1 L.FTDVKISLSTGIPVRI.N YDR338C 1 1 2.3% 695 77846 5.3 U YDR338C SGDID:S000002746, Chr IV from 1149458-1147371, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_58.23242.23242.2 1.6874 0.06 90.5 1805.8922 1804.9084 8609.5 129 4.323 33.3 1 H.DEEDGELSRTISLPSR.V Reverse_YDL113C 1 1 2.3% 640 72546 7.0 U ATG20 SGDID:S000002271, Chr IV from 258555-256633, reverse complement, Verified ORF, "Protein required for transport of aminopeptidase I (Lap4p) through the cytoplasm-to-vacuole targeting pathway; binds phosphatidylinositol-3-phosphate, involved in localization of membranes to the preautophagosome, potential Cdc28p substrate" * Jamie_phos_01_itms_94.37740.37740.2 2.1769 0.2008 97.7 1466.8322 1466.51 3836.2 7 4.744 46.4 1 K.GGYSKGGSGTNNNPR.E Reverse_YIL129C 1 1 2.2% 2376 269856 6.3 U TAO3 SGDID:S000001391, Chr IX from 113237-106107, reverse complement, Verified ORF, "Protein involved in cell morphogenesis and proliferation, associated with protein kinase Cbk1p; mutants activate OCH1 transcription" * Jamie_phos_01_itms_15.07738.07738.4 4.2823 0.153 94.3 5582.8564 5577.081 4955.9 306 4.695 13.4 1 L.QSNAISPSSTASNNSSSAKILPVKNNFSSSVHRKMGPLNNTNNNHKYKSTTN.S YJL080C 1 1 2.2% 1222 134809 5.8 U SCP160 SGDID:S000003616, Chr X from 289142-285474, reverse complement, Verified ORF, "Essential RNA-binding G protein effector of mating response pathway, predominantly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins" * Jamie_phos_01_itms_43.17757.17757.2 2.017 0.1225 98.3 3108.5522 3108.5625 9919.2 55 4.863 23.1 1 P.REKAKATKTSIQDYLKKLASNLDEEKV.K YPL084W 1 1 2.1% 844 97276 5.4 U BRO1 SGDID:S000006005, Chr XVI from 394035-396569, Verified ORF, "Cytoplasmic class E vacuolar protein sorting (VPS) factor that coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes" * Jamie_phos_01_itms_20.09498.09498.2 2.3428 0.205 91.8 2101.912 2103.4321 5613.5 1 4.383 41.2 1 L.AFEKSCTLFNIAVIFTQI.A Reverse_YLL054C 1 1 2.1% 769 89163 7.8 U YLL054C SGDID:S000003977, Chr XII from 35203-32894, reverse complement, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_10.05832.05832.2 2.7637 0.2147 92.3 1962.6721 1962.2927 7787.8 3 4.432 46.7 1 L.SIELLPYVPYITKYFD.V Reverse_YLR032W 1 1 2.0% 1169 134002 6.4 U RAD5 SGDID:S000004022, Chr XII from 204992-208501, Verified ORF, "Single-stranded DNA-dependent ATPase, involved in postreplication repair; contains RING finger domain" * Jamie_phos_01_itms_92.37013.37013.2 1.9118 0.2416 94.6 2727.5122 2728.1448 8530.9 2 4.506 31.8 1 I.ERDYQIDFIRVLSAMSAKKRGRS.D YLL003W 1 1 2.0% 946 112978 9.8 U SFI1 SGDID:S000003926, Chr XII from 143200-146040, Verified ORF, "Centrin (Cdc31p)-binding protein required for spindle pole body (SPB) duplication, localizes to the half-bridge of the SPB, required for progression through G(2)-M transition, has similarity to Xenopus laevis XCAP-C" * Jamie_phos_01_itms_25.11128.11128.2 3.4921 0.3342 93.8 2274.912 2275.4314 7269.7 1 5.285 50.0 1 R.DKFVPETS*PTNIPT*DVLIK.Q YMR155W 1 1 2.0% 547 60044 8.1 U YMR155W SGDID:S000004764, Chr XIII from 568550-570193, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_2.01768.01768.2 1.377 0.1903 90.1 1168.7122 1168.2487 3938.5 15 4.294 50.0 1 N.DYIGSPVRSSS.P YJR127C 1 1 1.9% 1380 155062 8.0 U RSF2 SGDID:S000003888, Chr X from 662974-658832, reverse complement, Verified ORF, "Zinc-finger protein involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions" * Jamie_phos_01_itms_64.25588.25588.2 1.9301 0.2304 94.4 2877.8123 2875.477 10761.3 104 4.485 24.0 1 S.NFAKPAGQGILPIPKKSRIIKTDKPR.P YDR421W 1 1 1.9% 950 108205 6.3 U ARO80 SGDID:S000002829, Chr IV from 1312030-1314882, Verified ORF, "Zinc finger transcriptional activator of the Zn2Cys6 family; activates transcription of aromatic amino acid catabolic genes in the presence of aromatic amino acids" * Jamie_phos_01_itms_25.11273.11273.2 2.2163 0.2036 99.0 1956.8722 1954.2666 10126.4 30 4.885 35.3 1 W.MLTGSAVRLAQDMGFIEN.S Reverse_YAL017W 1 1 1.8% 1356 152330 5.7 U PSK1 SGDID:S000000015, Chr I from 120226-124296, Verified ORF, "One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status" * Jamie_phos_01_itms_26.11789.11789.2 2.3623 0.2506 97.4 2823.9521 2825.1663 6917.7 195 4.743 25.0 1 Y.KLKNTRHALDEYTSLNSMDKLTGTS.I Reverse_YBL101C 1 1 1.7% 1117 123609 6.9 U ECM21 SGDID:S000000197, Chr II from 28299-24946, reverse complement, Verified ORF, "Non-essential protein of unknown function; promoter contains several Gcn4p binding elements" * Jamie_phos_01_itms_34.14712.14712.2 2.3778 0.2989 90.6 2379.6921 2382.3074 5898.6 208 5.226 27.8 1 I.DEEGS*EENKLQHSS*MHLHN.K Reverse_YEL063C 1 1 1.7% 590 65786 8.4 U CAN1 SGDID:S000000789, Chr V from 33466-31694, reverse complement, Verified ORF, "Plasma membrane arginine permease, requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance" * Jamie_phos_01_itms_106.45109.45109.2 1.0939 0.0897 92.0 902.1722 904.99817 4083.5 98 4.425 33.3 1 Y.GNAAGFAPSL.F Reverse_YOR291W 1 1 1.6% 1472 166749 6.1 U YOR291W SGDID:S000005817, Chr XV from 861172-865590, Uncharacterized ORF, "Hypothetical protein" * Jamie_phos_01_itms_8.05099.05099.2 2.6523 0.1924 93.3 2611.612 2609.8127 8830.9 1 4.448 34.8 1 G.NPESIQVGLVDLGDETLTGTKDFC.M YJL041W 1 1 1.6% 823 86516 6.3 U NSP1 SGDID:S000003577, Chr X from 365700-365700,365819-368289, Verified ORF, "Essential component of the nuclear pore complex, which mediates nuclear import and export" * Jamie_phos_01_itms_100.41878.41878.2 1.8524 0.1813 92.1 1286.9521 1284.3251 5862.9 90 4.404 41.7 1 A.NPAGASQPEPTTN.E YMR229C 1 1 1.5% 1729 193133 6.2 U RRP5 SGDID:S000004842, Chr XIII from 731122-725933, reverse complement, Verified ORF, "Protein required for the synthesis of both 18S and 5.8S rRNA; C-terminal region is crucial for the formation of 18S rRNA and N-terminal region is required for the 5.8S rRNA; component of small ribosomal subunit (SSU) processosome" * Jamie_phos_01_itms_14.07103.07103.3 3.6992 0.3499 97.8 3199.8542 3201.1194 4704.3 444 5.502 24.0 1 K.VEDAEY*ESS*DDEDEKLDKSNELPNLR.R YML059C 1 1 1.5% 1679 187132 8.1 U NTE1 SGDID:S000004524, Chr XIII from 158258-153219, reverse complement, Verified ORF, "Serine esterase that deacylates exogenous lysophospholipids, homolog of human neuropathy target esterase (NTE); mammalian NTE1 deacylates phosphatidylcholine to glycerophosphocholine" * Jamie_phos_01_itms_105.44610.44610.3 2.5437 0.2465 95.2 2815.8843 2819.0574 9868.6 3 4.712 24.0 1 L.KGRVSPRPNLLPTTSFSAAQEETEDS.A YBL047C 1 1 1.5% 1381 150783 4.7 U EDE1 SGDID:S000000143, Chr II from 132043-127898, reverse complement, Verified ORF, "Key endocytic protein involved in a network of interactions with other endocytic proteins, binds membranes in a ubiquitin-dependent manner, may also bind ubiquitinated membrane-associated proteins" * Jamie_phos_01_itms_13.06780.06780.2 3.6033 0.189 91.6 2260.872 2259.542 8623.8 59 4.368 35.0 1 S.LQDMPHQVSAPAVNTQPTVPQ.V YIL147C 1 1 1.5% 1220 134435 7.5 U SLN1 SGDID:S000001409, Chr IX from 73453-69791, reverse complement, Verified ORF, "Histidine kinase osmosensor that regulates a MAP kinase cascade; transmembrane protein with an intracellular kinase domain that signals to Ypd1p and Ssk1p, thereby forming a phosphorelay system similar to bacterial two-component regulators" * Jamie_phos_01_itms_13.06749.06749.2 1.8527 0.2202 95.2 1896.5521 1897.9908 7471.2 345 4.543 32.4 1 D.REKASNDDVSSIVSTTTS.S Reverse_YLR383W 1 1 1.5% 1114 128008 7.5 U SMC6 SGDID:S000004375, Chr XII from 885288-888632, Verified ORF, "Protein involved in structural maintenance of chromosomes; required for interchromosomal and sister chromatid recombination; homologous to S. pombe rad18" * Jamie_phos_01_itms_84.33177.33177.2 2.0832 0.1115 95.1 1991.7322 1991.162 7159.0 22 4.56 40.6 1 T.SDYQEKIPQAEQAIQEI.K Reverse_YCR030C 1 1 1.5% 870 96137 8.6 U SYP1 SGDID:S000000626, Chr III from 176433-173821, reverse complement, Verified ORF, "Protein with a potential role in actin cytoskeletal organization; overexpression suppresses a pfy1 (profilin) null mutation" * Jamie_phos_01_itms_6.04241.04241.2 1.7837 0.1317 94.3 1341.3322 1339.5927 4485.9 213 4.499 41.7 1 N.IGIPLPSNMVSNP.L Reverse_YNL138W 1 1 1.5% 526 57522 5.6 U SRV2 SGDID:S000005082, Chr XIV from 366743-368323, Verified ORF, "CAP (cyclase-associated protein) subunit of adenylyl cyclase complex; N-terminus binds adenylyl cyclase and facilitates activation by RAS; C-terminus binds ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis" YNL071W 1 1 1.7% 482 51818 7.8 U LAT1 SGDID:S000005015, Chr XIV from 491524-492972, Verified ORF, "Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA" Jamie_phos_01_itms_98.40030.40030.1 1.4736 0.2703 100.0 718.78 717.75385 2276.5 42 5.794 50.0 1 S.APSPSSTA.G Reverse_YHR164C 1 1 1.4% 1522 171694 6.5 U DNA2 SGDID:S000001207, Chr VIII from 429180-424612, reverse complement, Verified ORF, "Essential tripartite DNA replication factor with single-stranded DNA-dependent ATPase, ATP-dependent nuclease, and helicase activities; required for Okazaki fragment processing; involved in DNA repair pathways; potential Cdc28p substrate" * Jamie_phos_01_itms_27.11965.11965.2 2.5344 0.215 96.8 2386.9922 2389.5623 7395.7 42 4.712 30.0 1 L.MGEVCQLTLEAEGHNTINDKE.S YPL226W 1 1 1.4% 1196 134331 5.9 U NEW1 SGDID:S000006147, Chr XVI from 121767-125357, Verified ORF, "ATP binding cassette family member; Asn/Gln-rich rich region supports [NU+] prion formation, susceptibility to [PSI+] prion induction and aggregation of a fragment of the human Machado-Joseph Disease protein" * Jamie_phos_01_itms_7.04570.04570.2 2.3835 0.346 100.0 1897.2722 1897.8578 3693.4 33 6.014 43.8 1 L.SSPKGTPKPVDT*DDEED.- Reverse_YIL075C 1 1 1.4% 945 104232 6.2 U RPN2 SGDID:S000001337, Chr IX from 220697-217860, reverse complement, Verified ORF, "Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p" * Jamie_phos_01_itms_101.42487.42487.2 1.646 0.2451 98.0 1310.4122 1309.5052 5038.6 337 4.813 41.7 1 G.IGLSAGHLLVDVD.E YBR098W 1 1 1.4% 691 78764 7.5 U MMS4 SGDID:S000000302, Chr II from 441509-443584, Verified ORF, "Subunit of the structure-specific Mms4p-Mus81p endonuclease that cleaves branched DNA; involved in recombination and DNA repair" * Jamie_phos_01_itms_1.00561.00561.2 1.8478 0.3071 97.4 1130.2722 1132.1473 3246.8 4 5.457 72.2 1 H.GEDGTS*MAKR.V YBR275C 1 1 1.3% 1916 217959 6.6 U RIF1 SGDID:S000000479, Chr II from 757101-751351, reverse complement, Verified ORF, "Protein that binds to the Rap1p C-terminus and acts synergistically with Rif2p to help control telomere length and establish telomeric silencing; deletion results in telomere elongation" * Jamie_phos_01_itms_70.27711.27711.2 2.003 0.119 94.6 2627.0522 2628.948 8575.6 105 4.505 26.1 1 I.NAQNGLDTVPKTIGGKEKHHEIQL.G Reverse_YBL017C 1 1 1.3% 1579 177777 4.9 U PEP1 SGDID:S000000113, Chr II from 191586-186847, reverse complement, Verified ORF, "Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments" * Jamie_phos_01_itms_82.32565.32565.2 2.3298 0.1436 90.3 2157.3123 2156.3748 9408.4 8 4.315 34.2 1 F.TRQDGWDFVSGDGVIGTTML.I YGR014W 1 1 1.3% 1306 133114 4.2 U MSB2 SGDID:S000003246, Chr VII from 516947-520867, Verified ORF, "Mucin family member at the head of the Cdc42p- and MAP kinase-dependent filamentous growth signaling pathway; also functions as an osmosensor in parallel to the Sho1p-mediated pathway; potential Cdc28p substrate" * Jamie_phos_01_itms_94.37780.37780.2 1.4423 0.066 90.9 1680.5521 1680.633 5716.0 31 4.339 37.5 1 T.SSFASSSTTEGSETSSQ.G Reverse_YGR162W 1 1 1.3% 952 107101 6.0 U TIF4631 SGDID:S000003394, Chr VII from 824064-826922, Verified ORF, "Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that also contains eIF4E (Cdc33p); associates with the poly(A)-binding protein Pab1p, also interacts with eIF4A (Tif1p); homologous to Tif4632p" * Jamie_phos_01_itms_76.30017.30017.2 2.3963 0.2384 96.6 1393.7122 1393.4503 7087.2 6 4.656 54.5 1 R.RTKEAESINEES.S YLR045C 1 1 1.2% 888 100918 8.6 U STU2 SGDID:S000004035, Chr XII from 237704-235038, reverse complement, Verified ORF, "Microtubule-associated protein (MAP) of the XMAP215/Dis1 family; regulates microtubule dynamics during spindle orientation and metaphase chromosome alignment; interacts with spindle pole body component Spc72p" * Jamie_phos_01_itms_30.13282.13282.2 1.5784 0.2205 98.3 1098.0521 1095.1539 4175.7 43 4.839 55.0 1 N.FSIASGSTHST.I YBR115C 1 1 1.1% 1392 155345 5.9 U LYS2 SGDID:S000000319, Chr II from 473920-469742, reverse complement, Verified ORF, "Alpha aminoadipate reductase, catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p" * Jamie_phos_01_itms_73.28629.28629.2 2.0116 0.1914 90.7 1574.4321 1572.7527 9539.0 284 4.331 39.3 1 K.LVSEGKPGILESDDL.M Reverse_YLR371W 1 1 1.0% 1356 152596 9.2 U ROM2 SGDID:S000004363, Chr XII from 862713-866783, Verified ORF, "GDP/GTP exchange protein (GEP) for Rho1p and Rho2p; mutations are synthetically lethal with mutations in rom1, which also encodes a GEP" * Jamie_phos_01_itms_28.12312.12312.2 2.388 0.0462 96.3 1727.5122 1728.9481 6857.4 14 4.647 50.0 1 D.FRAFYPNVSRQTEI.L YPL160W 1 1 1.0% 1090 124141 5.8 U CDC60 SGDID:S000006081, Chr XVI from 246989-250261, Verified ORF, "Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA" * Jamie_phos_01_itms_7.04648.04648.2 2.2277 0.1636 92.0 1201.8722 1202.5443 5441.3 84 4.421 65.0 1 Q.MNKLKAAGKIK.F YMR205C 1 1 1.0% 959 104618 6.7 U PFK2 SGDID:S000004818, Chr XIII from 674765-671886, reverse complement, Verified ORF, "Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes" * Jamie_phos_01_itms_9.05445.05445.2 2.4643 0.2259 97.8 1305.2122 1305.3464 4622.8 2 5.355 72.2 1 K.VHS*YTDLAYR.M YNR016C 1 1 0.9% 2233 250351 6.3 U ACC1 SGDID:S000005299, Chr XIV from 661376-654675, reverse complement, Verified ORF, "Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to form malonyl-CoA; required for de novo biosynthesis of long-chain fatty acids" * Jamie_phos_01_itms_22.10085.10085.2 5.3724 0.5211 100.0 2061.4321 2061.17 8705.4 1 8.797 63.9 1 R.AVS*VSDLSYVANSQSSPLR.E Reverse_YMR229C 1 1 0.8% 1729 193133 6.2 U RRP5 SGDID:S000004842, Chr XIII from 731122-725933, reverse complement, Verified ORF, "Protein required for the synthesis of both 18S and 5.8S rRNA; C-terminal region is crucial for the formation of 18S rRNA and N-terminal region is required for the 5.8S rRNA; component of small ribosomal subunit (SSU) processosome" * Jamie_phos_01_itms_76.30049.30049.2 2.0214 0.1902 91.5 1417.6522 1416.7037 5616.8 3 4.371 57.7 1 I.SAVKVQLASGLPFV.S Reverse_YPL217C 1 1 0.8% 1183 135571 6.8 U BMS1 SGDID:S000006138, Chr XVI from 143170-139619, reverse complement, Verified ORF, "Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits and for processing of the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, has similarity to Tsr1p" * Jamie_phos_01_itms_6.04420.04420.2 1.7082 0.2491 99.6 936.71216 934.0397 6673.6 3 5.194 72.2 1 T.GPASPLPTGH.L Reverse_YDR170C 1 1 0.6% 2009 226885 4.8 U SEC7 SGDID:S000002577, Chr IV from 802217-796188, reverse complement, Verified ORF, "Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors involved in proliferation of the Golgi, intra-Golgi transport and ER-to-Golgi transport; found in the cytoplasm and on Golgi-associated coated vesicles" * Jamie_phos_01_itms_92.37018.37018.2 1.787 0.1831 90.4 1323.5721 1322.3374 5718.9 69 4.329 50.0 1 K.TEATSGANEPGKC.K YCR089W 1 1 0.6% 1609 166036 4.9 U FIG2 SGDID:S000000685, Chr III from 267430-272259, Verified ORF, "Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall integrity during mating" * Jamie_phos_01_itms_107.45438.45438.2 1.329 0.0869 90.9 1001.09216 1000.09357 4165.2 42 4.336 56.2 1 S.ETYKSSATI.S YBL088C 1 1 0.5% 2787 321568 6.9 U TEL1 SGDID:S000000184, Chr II from 59379-51016, reverse complement, Verified ORF, "Protein kinase, primarily involved in telomere length regulation; contributes to cell cycle checkpoint control in response to DNA damage; functionally redundant with Mec1p; homolog of human ataxia telangiectasia (ATM) gene" * Jamie_phos_01_itms_75.29451.29451.2 1.5063 0.2626 90.5 1557.1522 1556.7557 6129.1 81 4.323 37.5 1 Q.DFTKSFAEQLKEL.L YLR106C 1 1 0.4% 4910 559316 5.0 U MDN1 SGDID:S000004096, Chr XII from 363739-349007, reverse complement, Verified ORF, "Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP-dependent remodeling of 60S subunits and subsequent export from nucleoplasm to cytoplasm" * Jamie_phos_01_itms_40.16642.16642.2 2.0762 0.2549 97.5 2289.5522 2288.5835 7399.5 6 4.715 34.2 1 L.LAQFMGRELITLNAHQNTET.G Proteins Peptide IDs Spectra Unfiltered 11071 92316 101590 Filtered 205 455 505 Forward matches 147 396 446 Decoy matches 58 59 59 Forward FP rate 39.46 14.9 13.23 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0