DTASelect v2.0.16 /data/6/jamest/xu/aug07/hx4/parc /scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta SEQUEST 3.0 in SQT format. --trypstat true Use criteria 0.0 Minimum peptide confidence 0.05 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 16 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement false Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 1000 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence contaminant_KERATIN03 40 100 51.4% 593 59519 5.2 U no description * PARC_hx4_04_itms.11648.11648.2 1.8483 0.205 97.0 2269.2122 2268.2903 4090.2 3 4.363 32.0 1 K.HYSSSRSGGGGGGGGCGGGGGVSSLR.I * PARC_hx4_04_itms.11710.11710.3 3.2874 0.2808 100.0 2269.5544 2268.2903 8197.2 1 4.839 30.0 1 K.HYSSSRSGGGGGGGGCGGGGGVSSLR.I * PARC_hx4_02_itms.13702.13702.1 1.847 0.2329 95.7 1029.35 1030.0819 5081.3 11 4.342 50.0 1 K.GSLGGGFSSGGF.S * PARC_hx4_03_itms.11319.11319.2 3.2851 0.3056 100.0 1132.8121 1133.1625 5477.4 4 5.082 81.8 1 F.SSGGFSGGSFSR.G * PARC_hx4_03_itms.11028.11028.3 2.8187 0.2824 100.0 1721.7843 1719.9103 6575.5 14 4.802 35.7 1 L.LSGNEKVTMQNLNDR.L PARC_hx4_02_itms.10503.10503.2 2.9143 0.2184 100.0 1092.3322 1091.2273 7158.8 5 4.791 87.5 3 K.VTMQNLNDR.L PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V * PARC_hx4_02_itms.11006.11006.2 4.61 0.3788 100.0 1383.0721 1382.4668 9579.3 1 7.607 81.8 1 R.ALEESNYELEGK.I * PARC_hx4_02_itms.11010.11010.1 3.3256 0.2915 100.0 1383.85 1382.4668 7735.5 1 5.288 63.6 2 R.ALEESNYELEGK.I * PARC_hx4_04_itms.20837.20837.2 4.8198 0.3572 100.0 2368.892 2368.6523 10357.4 1 6.977 50.0 4 K.NQILNLTTDNANILLQIDNAR.L * PARC_hx4_04_itms.16842.16842.2 4.3683 0.2575 100.0 1571.4321 1571.7306 8781.2 1 6.518 76.9 1 T.TDNANILLQIDNAR.L PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.L PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.L * PARC_hx4_04_itms.12874.12874.2 3.2903 0.2549 100.0 1235.3722 1235.4258 4281.2 1 5.044 94.4 1 R.LKYENEVALR.Q * PARC_hx4_02_itms.10358.10358.2 2.9251 0.2766 100.0 994.0522 994.0923 4145.9 1 6.253 92.9 2 K.YENEVALR.Q * PARC_hx4_02_itms.10352.10352.1 2.2361 0.0882 100.0 994.58 994.0923 4492.8 1 4.106 78.6 3 K.YENEVALR.Q PARC_hx4_04_itms.12885.12885.2 2.9352 0.3256 100.0 1357.8922 1358.4972 7948.6 1 6.098 77.3 2 L.RQSVEADINGLR.R PARC_hx4_02_itms.12008.12008.2 3.1018 0.241 100.0 1201.7722 1202.3097 3922.6 1 5.725 95.0 2 R.QSVEADINGLR.R * PARC_hx4_04_itms.14997.14997.1 1.9782 0.0902 98.8 1031.56 1032.2224 8482.3 36 3.797 68.8 1 R.VLDELTLTK.A * PARC_hx4_03_itms.13352.13352.2 3.2309 0.2887 100.0 1032.2322 1032.2224 3576.9 2 5.438 87.5 3 R.VLDELTLTK.A * PARC_hx4_04_itms.26358.26358.2 5.996 0.4228 100.0 2098.652 2097.3853 8927.6 1 9.048 73.5 1 K.ADLEMQIESLTEELAYLK.K PARC_hx4_02_itms.11622.11622.1 2.3223 0.143 95.0 865.51 866.0019 3791.6 1 3.711 83.3 1 T.EELAYLK.K * PARC_hx4_04_itms.22196.22196.2 5.847 0.4745 100.0 2874.9521 2874.2134 6198.5 1 8.152 46.2 1 R.NVSTGDVNVEMNAAPGVDLTQLLNNMR.S * PARC_hx4_02_itms.10292.10292.2 4.4111 0.3756 100.0 1366.1721 1366.43 8360.3 1 6.875 85.0 5 R.SQYEQLAEQNR.K * PARC_hx4_02_itms.10272.10272.1 2.4106 0.183 100.0 1367.43 1366.43 4362.3 1 4.885 60.0 1 R.SQYEQLAEQNR.K * PARC_hx4_03_itms.09696.09696.2 3.4579 0.2394 100.0 1494.6522 1494.6041 9842.3 1 5.916 59.1 3 R.SQYEQLAEQNRK.D * PARC_hx4_03_itms.13254.13254.1 2.8229 0.3085 100.0 1109.48 1110.1681 5768.9 1 6.443 75.0 3 K.DAEAWFNEK.S * PARC_hx4_03_itms.13260.13260.2 3.2103 0.225 100.0 1110.1322 1110.1681 5821.4 1 5.669 81.2 2 K.DAEAWFNEK.S * PARC_hx4_04_itms.17942.17942.2 5.6846 0.3547 100.0 1997.6322 1998.151 8471.2 1 9.064 78.1 17 K.ELTTEIDNNIEQISSYK.S * PARC_hx4_02_itms.10394.10394.2 1.8017 0.1187 95.9 847.83215 847.94385 3593.0 40 3.43 83.3 1 K.SEITELR.R * PARC_hx4_02_itms.12159.12159.1 2.0623 0.207 100.0 1390.79 1391.4778 1805.9 6 5.497 41.7 1 K.QSLEASLAETEGR.Y * PARC_hx4_04_itms.13066.13066.2 4.0915 0.4422 100.0 1390.8722 1391.4778 4757.5 1 7.76 70.8 5 K.QSLEASLAETEGR.Y * PARC_hx4_02_itms.12574.12574.2 3.3369 0.2123 98.4 1339.4722 1338.4694 10467.9 1 5.456 70.0 1 R.YCVQLSQIQAQ.I * PARC_hx4_04_itms.16458.16458.2 4.1409 0.2597 100.0 1428.4722 1428.6285 8337.9 1 5.332 81.8 3 Q.ISALEEQLQQIR.A * PARC_hx4_04_itms.16676.16676.2 5.879 0.3443 100.0 2086.2922 2084.2104 11268.6 1 7.339 71.9 9 R.AETECQNTEYQQLLDIK.I * PARC_hx4_04_itms.14922.14922.2 2.8559 0.1398 99.6 1435.0322 1435.623 7652.7 1 5.002 75.0 1 K.IRLENEIQTYR.S * PARC_hx4_02_itms.10702.10702.1 3.2255 0.2469 100.0 1165.65 1166.2761 5420.6 2 4.839 81.2 3 R.LENEIQTYR.S * PARC_hx4_02_itms.10694.10694.2 3.5082 0.2564 100.0 1165.7322 1166.2761 6814.4 1 4.593 93.8 4 R.LENEIQTYR.S * PARC_hx4_02_itms.10454.10454.1 2.452 0.3325 100.0 1262.65 1263.3066 4638.7 3 5.365 53.8 2 R.SLLEGEGSSGGGGR.G * PARC_hx4_02_itms.10443.10443.2 3.6912 0.4793 100.0 1263.1122 1263.3066 7058.6 1 7.493 80.8 2 R.SLLEGEGSSGGGGR.G YOL039W 4 5 48.1% 106 10746 4.0 U RPP2A SGDID:S000005399, Chr XV from 254295-254615, Verified ORF, "Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * PARC_hx4_03_itms.12175.12175.2 4.0911 0.3906 100.0 1399.3922 1399.587 9468.5 1 6.525 76.9 1 Y.LLLNAAGNTPDATK.I * PARC_hx4_04_itms.17632.17632.2 4.81 0.2932 100.0 1545.2922 1545.727 7499.0 1 7.957 73.1 2 K.AILESVGIEIEDEK.V * PARC_hx4_04_itms.16704.16704.2 3.6746 0.3831 100.0 1090.2322 1090.2621 7171.5 1 6.911 85.0 1 K.VSSVLSALEGK.S * PARC_hx4_02_itms.11764.11764.2 3.5826 0.3431 100.0 1334.1522 1334.4229 8873.4 2 6.567 72.7 1 K.SVDELITEGNEK.L contaminant_KERATIN02 26 43 41.5% 622 61987 5.2 U no description * PARC_hx4_03_itms.10107.10107.2 4.6422 0.4758 100.0 1232.9122 1233.2833 6907.3 1 8.738 86.7 6 T.SGGGGGGGLGSGGSIR.S * PARC_hx4_04_itms.15342.15342.2 4.6116 0.5252 100.0 2024.4521 2024.0703 8755.3 1 10.035 41.3 1 Y.SYGGGSGGGFSASSLGGGFGGGSR.G * PARC_hx4_03_itms.11340.11340.1 2.2153 0.2912 100.0 1196.46 1197.2499 5109.0 2 4.907 50.0 1 F.SASSLGGGFGGGSR.G * PARC_hx4_04_itms.12149.12149.2 3.3121 0.481 100.0 951.9522 952.01465 3711.6 1 7.003 80.0 2 S.SLGGGFGGGSR.G * PARC_hx4_03_itms.12443.12443.2 4.7045 0.3483 100.0 1692.4521 1692.7826 9704.9 1 6.796 57.9 1 L.GGFGGGAGGGDGGILTANEK.S * PARC_hx4_02_itms.09554.09554.2 2.84 0.292 100.0 1066.1721 1066.1742 7588.8 10 5.812 81.2 3 K.STMQELNSR.L PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V * PARC_hx4_02_itms.11184.11184.1 3.0103 0.3075 100.0 1586.75 1587.6836 6279.3 3 5.937 46.2 1 K.VQALEEANNDLENK.I * PARC_hx4_02_itms.11168.11168.2 5.6669 0.4459 100.0 1586.8121 1587.6836 9856.6 1 7.993 88.5 3 K.VQALEEANNDLENK.I * PARC_hx4_04_itms.15669.15669.1 3.1935 0.2769 100.0 1605.67 1606.7289 7542.4 1 5.91 58.3 2 K.NYSPYYNTIDDLK.D * PARC_hx4_04_itms.15704.15704.2 3.4269 0.2967 100.0 1605.8922 1606.7289 4552.9 1 6.349 83.3 3 K.NYSPYYNTIDDLK.D * PARC_hx4_02_itms.11045.11045.1 2.3711 0.1749 100.0 981.33 982.07825 5241.1 1 4.143 71.4 1 Y.YNTIDDLK.D * PARC_hx4_03_itms.12675.12675.1 2.6494 0.2427 100.0 1315.45 1316.4539 5932.3 1 5.034 63.6 1 K.DQIVDLTVGNNK.T * PARC_hx4_03_itms.12690.12690.2 4.8727 0.3266 100.0 1316.4722 1316.4539 9589.5 1 6.928 86.4 1 K.DQIVDLTVGNNK.T * PARC_hx4_03_itms.12981.12981.1 2.3726 0.1536 100.0 1060.5 1061.1802 3700.8 1 4.695 68.8 1 K.TLLDIDNTR.M * PARC_hx4_03_itms.12971.12971.2 2.6808 0.1247 99.3 1060.9321 1061.1802 3991.8 1 3.968 87.5 2 K.TLLDIDNTR.M * PARC_hx4_03_itms.13454.13454.2 2.0835 0.1715 98.9 897.6922 898.02155 4386.5 110 3.942 66.7 1 R.MTLDDFR.I * PARC_hx4_02_itms.11492.11492.2 2.1416 0.151 98.6 1066.9521 1067.2048 3555.5 18 5.598 78.6 1 K.FEMEQNLR.Q * PARC_hx4_02_itms.11469.11469.2 3.4881 0.2916 100.0 1160.2522 1158.2566 3158.8 1 5.836 85.0 2 R.QGVDADINGLR.Q * PARC_hx4_04_itms.14306.14306.2 2.9092 0.1341 99.8 1191.1322 1191.385 4653.0 18 4.021 61.1 2 R.QVLDNLTMEK.S * PARC_hx4_04_itms.22481.22481.2 5.5546 0.2597 100.0 2171.5723 2172.4702 9941.9 1 6.885 67.6 1 K.SDLEMQYETLQEELMALK.K * PARC_hx4_04_itms.15323.15323.2 3.6541 0.2737 100.0 2517.1921 2517.727 10283.8 1 5.401 43.5 1 K.EEMSQLTGQNSGDVNVEINVAPGK.D * PARC_hx4_04_itms.17571.17571.2 5.1985 0.4433 100.0 1857.7322 1858.0587 9994.0 1 7.973 76.7 1 M.IQEQISNLEAQITDVR.Q * PARC_hx4_04_itms.18773.18773.2 5.2331 0.5062 100.0 2094.8123 2096.308 8482.4 1 9.045 59.4 2 R.QEIECQNQEYSLLLSIK.M * PARC_hx4_04_itms.16451.16451.3 6.1911 0.3478 100.0 2510.3643 2511.6177 8647.4 1 7.36 36.4 1 K.EIETYHNLLEGGQEDFESSGAGK.I * PARC_hx4_04_itms.16439.16439.2 4.8863 0.4014 100.0 2512.392 2511.6177 7750.7 1 7.331 54.5 1 K.EIETYHNLLEGGQEDFESSGAGK.I contaminant_KERATIN13 33 102 39.5% 643 65494 6.6 U no description * PARC_hx4_04_itms.18999.18999.2 4.5596 0.4153 100.0 1964.7122 1965.2542 5836.1 1 6.852 56.2 1 N.QSLLQPLNVEIDPEIQK.V * PARC_hx4_04_itms.19119.19119.2 3.8093 0.2462 100.0 1836.5322 1837.1234 6401.0 1 6.263 56.7 2 Q.SLLQPLNVEIDPEIQK.V * PARC_hx4_04_itms.18033.18033.2 3.5613 0.219 98.5 1749.5122 1750.0453 5678.4 1 5.599 57.1 1 S.LLQPLNVEIDPEIQK.V * PARC_hx4_04_itms.16680.16680.2 3.1597 0.3725 100.0 1635.6921 1636.8859 6582.3 1 6.294 69.2 1 L.LQPLNVEIDPEIQK.V * PARC_hx4_04_itms.17366.17366.2 4.1678 0.3627 100.0 1383.9521 1384.5315 8301.0 1 6.418 81.8 11 K.SLNNQFASFIDK.V PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 Q.FASFIDK.V PARC_hx4_04_itms.13426.13426.2 4.5629 0.0087 99.8 1476.1322 1476.6726 10861.7 1 6.149 86.4 3 R.FLEQQNQVLQTK.W PARC_hx4_04_itms.13463.13463.1 3.2571 0.0225 100.0 1477.67 1476.6726 5679.3 1 4.217 63.6 2 R.FLEQQNQVLQTK.W * PARC_hx4_04_itms.17072.17072.2 4.7559 0.451 100.0 1476.4321 1476.6293 8766.2 1 7.589 90.9 5 K.WELLQQVDTSTR.T * PARC_hx4_04_itms.17056.17056.1 2.2816 0.1696 100.0 1476.78 1476.6293 5832.6 2 4.876 50.0 1 K.WELLQQVDTSTR.T * PARC_hx4_02_itms.11339.11339.2 3.6471 0.3041 100.0 1290.3121 1290.416 6904.6 1 5.508 80.0 1 W.ELLQQVDTSTR.T * PARC_hx4_04_itms.18129.18129.1 2.4002 0.2849 100.0 1383.45 1384.4875 8133.9 1 5.882 55.0 2 R.THNLEPYFESF.I * PARC_hx4_04_itms.18170.18170.2 3.238 0.252 100.0 1383.6921 1384.4875 5624.6 1 5.348 70.0 2 R.THNLEPYFESF.I * PARC_hx4_03_itms.12875.12875.2 3.6597 0.334 100.0 1302.4321 1301.4316 8559.0 1 6.88 83.3 2 K.NMQDMVEDYR.N PARC_hx4_02_itms.08900.08900.2 3.0627 0.1925 100.0 1153.3722 1153.234 5860.0 4 4.708 87.5 5 R.NKYEDEINK.R * PARC_hx4_04_itms.13319.13319.2 3.805 0.2232 100.0 1421.7322 1422.5809 6926.6 1 5.497 86.4 6 K.RTNAENEFVTIK.K * PARC_hx4_03_itms.12363.12363.2 3.4382 0.406 100.0 1266.2522 1266.3934 7766.3 1 6.428 85.0 4 R.TNAENEFVTIK.K * PARC_hx4_03_itms.02907.02907.2 2.5159 0.3039 95.7 1796.7722 1797.0148 3837.6 1 5.382 50.0 1 K.LDNLQQEIDFLTALY.Q * PARC_hx4_02_itms.09032.09032.1 2.79 0.2945 100.0 1125.41 1126.2084 6420.6 1 6.412 72.2 4 K.AEAESLYQSK.Y * PARC_hx4_02_itms.09038.09038.2 3.4869 0.3252 100.0 1127.1721 1126.2084 7255.0 1 6.539 77.8 2 K.AEAESLYQSK.Y * PARC_hx4_03_itms.12054.12054.1 2.704 0.2405 100.0 1179.53 1180.303 5145.8 5 4.718 66.7 3 K.YEELQITAGR.H * PARC_hx4_04_itms.13292.13292.2 3.7922 0.2518 100.0 1180.2322 1180.303 7333.6 1 6.656 94.4 5 K.YEELQITAGR.H PARC_hx4_02_itms.11588.11588.2 3.1692 0.1548 100.0 974.3522 974.102 3676.0 6 4.351 92.9 2 K.IEISELNR.V * PARC_hx4_04_itms.13635.13635.2 4.8322 0.4041 100.0 1845.5922 1846.0073 7985.1 1 7.498 76.7 5 K.KQISNLQQSISDAEQR.G * PARC_hx4_02_itms.12320.12320.2 4.853 0.4261 100.0 1717.3922 1717.8333 8355.0 1 8.19 78.6 6 K.QISNLQQSISDAEQR.G * PARC_hx4_04_itms.15254.15254.2 5.1818 0.2854 100.0 1358.0322 1358.4912 9281.6 1 6.855 90.9 8 K.LNDLEDALQQAK.E * PARC_hx4_04_itms.15216.15216.1 3.0545 0.2743 100.0 1358.62 1358.4912 6731.7 1 5.462 54.5 2 K.LNDLEDALQQAK.E * PARC_hx4_02_itms.11542.11542.2 2.9795 0.2177 100.0 1142.4722 1142.2689 5795.1 3 5.546 81.2 1 R.DYQELMNTK.L * PARC_hx4_02_itms.11568.11568.1 3.101 0.2319 100.0 1143.35 1142.2689 4724.5 2 5.111 75.0 3 R.DYQELMNTK.L * PARC_hx4_02_itms.10364.10364.1 2.425 0.3206 100.0 1033.51 1034.1112 4025.9 17 5.15 50.0 3 R.TLLEGEESR.M * PARC_hx4_02_itms.10346.10346.2 2.5015 0.1094 98.8 1034.1122 1034.1112 4242.8 2 3.85 81.2 1 R.TLLEGEESR.M * PARC_hx4_03_itms.10054.10054.2 5.6779 0.2853 100.0 2384.3323 2385.298 8614.3 1 10.969 43.3 5 R.GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR.G * PARC_hx4_04_itms.12027.12027.3 4.7165 0.4383 100.0 3313.9744 3314.2085 8489.6 1 7.17 20.4 1 R.GSYGSGGGSYGSGGSSYGSGGGGGGHGSYGSGSSSGGYR.G contaminant_KERATIN05 23 33 38.2% 471 51531 5.2 U no description * PARC_hx4_03_itms.11220.11220.1 2.1898 0.1656 100.0 1106.51 1107.2181 4061.3 2 4.949 65.0 1 R.ISSVLAGGSCR.A * PARC_hx4_03_itms.11209.11209.2 3.6751 0.4462 100.0 1106.5122 1107.2181 4026.2 1 7.331 90.0 1 R.ISSVLAGGSCR.A PARC_hx4_02_itms.10503.10503.2 2.9143 0.2184 100.0 1092.3322 1091.2273 7158.8 5 4.791 87.5 3 K.VTMQNLNDR.L PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V PARC_hx4_03_itms.10879.10879.2 3.4514 0.3442 100.0 1301.1721 1302.4241 6669.8 1 6.883 72.7 1 R.ALEEANADLEVK.I PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.T PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.T * PARC_hx4_02_itms.11628.11628.2 2.181 0.1898 99.1 1039.9321 1038.1454 3215.9 165 4.223 71.4 1 K.YETELNLR.M PARC_hx4_04_itms.15374.15374.1 2.2701 0.2089 100.0 1029.62 1030.2096 3903.6 89 5.083 56.2 2 R.VLDELTLAR.A PARC_hx4_04_itms.15368.15368.2 3.7512 0.2451 100.0 1030.0721 1030.2096 5093.7 1 5.656 93.8 3 R.VLDELTLAR.A * PARC_hx4_04_itms.16557.16557.2 3.6407 0.3026 100.0 1278.4922 1277.4755 8850.2 1 5.651 80.0 2 R.ADLEMQIESLK.E PARC_hx4_02_itms.11622.11622.1 2.3223 0.143 95.0 865.51 866.0019 3791.6 1 3.711 83.3 1 K.EELAYLK.K * PARC_hx4_04_itms.15306.15306.2 3.9756 0.4903 100.0 2086.0322 2087.269 6876.0 1 8.256 50.0 1 R.GQVGGDVNVEMDAAPGVDLSR.I * PARC_hx4_03_itms.16223.16223.1 2.5991 0.2458 100.0 1172.42 1173.2671 5309.3 1 5.702 68.8 1 K.DAEEWFFTK.T * PARC_hx4_03_itms.16233.16233.2 3.59 0.3359 100.0 1173.0521 1173.2671 7772.6 1 6.458 87.5 1 K.DAEEWFFTK.T PARC_hx4_02_itms.09010.09010.2 3.8684 0.4598 100.0 1361.6721 1362.4796 5863.7 1 8.19 75.0 2 R.EVATNSELVQSGK.S PARC_hx4_02_itms.11044.11044.1 2.1624 0.0726 98.8 1220.49 1221.3068 4399.6 20 3.473 55.0 1 K.ASLENSLEETK.G PARC_hx4_02_itms.11036.11036.2 3.3394 0.3186 100.0 1220.6921 1221.3068 7703.7 1 6.046 80.0 1 K.ASLENSLEETK.G PARC_hx4_04_itms.16322.16322.2 4.0742 0.3467 100.0 1343.3322 1343.523 9529.5 1 6.301 81.8 1 M.IGSVEEQLAQLR.C PARC_hx4_04_itms.14835.14835.2 3.3483 0.1427 100.0 1380.5122 1380.5437 7261.5 1 5.613 85.0 3 K.TRLEQEIATYR.R PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.R PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.R * PARC_hx4_04_itms.13588.13588.2 4.46 0.526 100.0 2307.872 2310.396 7024.6 1 8.893 47.6 1 R.LLEGEDAHLSSSQFSSGSQSSR.D YOR106W 10 36 36.7% 283 32498 7.0 U VAM3 SGDID:S000005632, Chr XV from 519121-519972, Verified ORF, "Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in vacuolar protein trafficking; member of the syntaxin family of proteins" * PARC_hx4_04_itms.16367.16367.2 3.9664 0.3531 100.0 1259.2522 1259.358 5550.6 1 6.692 85.0 1 M.SFFDIEAQSSK.G * PARC_hx4_02_itms.09353.09353.2 4.2544 0.2261 100.0 1593.7522 1593.65 5830.8 1 6.176 65.4 7 K.GNSQQEPQFSTNQK.T * PARC_hx4_04_itms.20354.20354.2 5.3055 0.5041 100.0 1636.6322 1637.7869 7755.3 1 8.39 76.9 13 K.ELSNLIETFAEQSR.V * PARC_hx4_04_itms.14519.14519.2 3.9763 0.2441 100.0 1534.2722 1532.7002 3297.9 4 5.424 79.2 3 K.IETELIPNCTSVR.D * PARC_hx4_04_itms.13137.13137.2 3.8785 0.2954 100.0 1366.5922 1366.5602 9075.1 1 5.719 86.4 2 K.IESNILIHQNGK.L * PARC_hx4_03_itms.10812.10812.2 3.5759 0.3447 100.0 1415.5122 1415.5051 7058.5 1 6.155 80.0 4 K.YQSLQQSYNQR.K * PARC_hx4_03_itms.09502.09502.2 2.1565 0.1382 98.0 888.09216 888.0086 5555.0 1 3.757 81.2 1 K.TPISPGTSK.E * PARC_hx4_02_itms.11798.11798.1 1.6718 0.1693 98.6 1266.48 1267.3782 2074.0 64 3.539 50.0 1 R.QDPESSYISIK.V * PARC_hx4_02_itms.11788.11788.2 2.7327 0.3518 100.0 1266.8322 1267.3782 4065.0 2 5.354 65.0 3 R.QDPESSYISIK.V * PARC_hx4_03_itms.10691.10691.1 2.1926 0.1698 95.8 1010.49 1011.1228 4606.3 254 4.726 62.5 1 R.IHTAVQEVN.A YDR382W 4 6 36.4% 110 11050 4.1 U RPP2B SGDID:S000002790, Chr IV from 1239482-1239814, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * PARC_hx4_04_itms.15417.15417.2 4.4086 0.3691 100.0 1639.6322 1638.9047 7426.5 1 8.12 65.6 2 Y.LLLVQGGNAAPSAADIK.A * PARC_hx4_04_itms.17031.17031.1 1.9628 0.1598 100.0 1203.64 1203.3782 7383.6 96 3.987 50.0 1 R.INELLSSLEGK.G * PARC_hx4_04_itms.17024.17024.2 3.6433 0.1626 100.0 1204.3121 1203.3782 7608.6 2 4.938 85.0 1 R.INELLSSLEGK.G * PARC_hx4_04_itms.15956.15956.2 3.7961 0.2555 100.0 1274.3522 1274.4136 10012.3 1 6.018 72.7 2 K.GSLEEIIAEGQK.K contaminant_KERATIN21 18 46 35.6% 357 39219 5.2 U no description PARC_hx4_02_itms.11277.11277.2 1.8497 0.2572 98.9 1017.0722 1017.1271 2816.6 5 5.414 81.2 1 R.QLDSIVGER.G * PARC_hx4_04_itms.17489.17489.1 2.6451 0.1978 100.0 1182.36 1182.3337 9930.6 3 4.784 66.7 2 R.GMQDLVEDFK.N * PARC_hx4_04_itms.17466.17466.2 3.6792 0.2982 100.0 1183.3722 1182.3337 7560.9 1 6.2 83.3 2 R.GMQDLVEDFK.N PARC_hx4_02_itms.08900.08900.2 3.0627 0.1925 100.0 1153.3722 1153.234 5860.0 4 4.708 87.5 5 K.NKYEDEINK.R PARC_hx4_04_itms.14084.14084.2 3.1428 0.1968 100.0 1379.3922 1379.5559 7381.3 1 4.778 68.2 1 K.RTAAENEFVTLK.K PARC_hx4_03_itms.12685.12685.2 3.1848 0.2643 100.0 1224.4521 1223.3684 6226.5 4 5.657 75.0 2 R.TAAENEFVTLK.K PARC_hx4_03_itms.16912.16912.2 3.7082 0.2235 100.0 1407.9521 1408.551 8260.0 1 5.123 72.7 4 K.ADTLTDEINFLR.A PARC_hx4_04_itms.18894.18894.1 1.9592 0.1224 98.6 1408.53 1408.551 3779.0 4 3.936 45.5 1 K.ADTLTDEINFLR.A PARC_hx4_04_itms.20691.20691.1 3.1164 0.1653 100.0 1329.69 1330.5211 6361.2 1 4.689 68.2 3 R.NLDLDSIIAEVK.A PARC_hx4_04_itms.20630.20630.2 4.7669 0.1939 100.0 1332.5322 1330.5211 6442.9 1 6.098 86.4 10 R.NLDLDSIIAEVK.A PARC_hx4_02_itms.09400.09400.2 3.1018 0.1596 100.0 1107.9122 1108.196 5151.7 1 6.027 93.8 4 K.AQYEEIAQR.S PARC_hx4_02_itms.11092.11092.2 3.1685 0.3357 100.0 1213.1122 1213.2891 6956.4 1 6.431 83.3 1 R.AEAESWYQTK.Y PARC_hx4_02_itms.11127.11127.1 2.2501 0.3841 100.0 1214.1 1213.2891 3904.8 33 6.32 61.1 1 R.AEAESWYQTK.Y PARC_hx4_03_itms.13627.13627.2 4.0278 0.4065 100.0 1659.8922 1659.7625 9241.5 1 7.678 67.9 3 K.QCANLQAAIADAEQR.G PARC_hx4_04_itms.15466.15466.2 3.7668 0.2034 100.0 1357.9321 1358.5345 8190.4 1 5.125 81.8 3 K.NKLEGLEDALQK.A PARC_hx4_03_itms.13020.13020.1 1.9766 0.1656 100.0 1115.43 1116.2566 8574.4 5 4.428 61.1 1 K.LEGLEDALQK.A PARC_hx4_03_itms.13035.13035.2 3.5326 0.3385 100.0 1116.2122 1116.2566 4302.1 1 5.641 88.9 1 K.LEGLEDALQK.A * PARC_hx4_04_itms.13239.13239.2 4.4233 0.4111 100.0 1448.2722 1448.6163 5788.7 1 7.978 71.9 1 R.AIGGGLSSVGGGSSTIK.Y YBL050W 10 21 34.9% 292 32803 5.1 U SEC17 SGDID:S000000146, Chr II from 125128-125157,125274-126122, Verified ORF, "Peripheral membrane protein required for vesicular transport between ER and Golgi and for the 'priming' step in homotypic vacuole fusion, part of the cis-SNARE complex; has similarity to alpha-SNAP" * PARC_hx4_02_itms.10877.10877.1 2.2427 0.1404 100.0 1003.6 1004.08435 5169.2 4 3.913 68.8 1 K.LFSGSDSYK.F * PARC_hx4_04_itms.17102.17102.1 2.7429 0.2853 100.0 1206.47 1207.369 4119.2 1 5.328 60.0 1 K.ELNLAGDSFLK.A * PARC_hx4_03_itms.15315.15315.2 2.7379 0.0902 98.6 1207.8121 1207.369 5778.7 1 3.966 75.0 3 K.ELNLAGDSFLK.A * PARC_hx4_02_itms.10665.10665.2 4.1553 0.4069 100.0 1860.0521 1859.9438 5422.8 1 7.223 56.2 1 K.KAGNEDEAGNTYVEAYK.C * PARC_hx4_02_itms.10893.10893.2 4.8657 0.5127 100.0 1731.3922 1731.7698 8172.1 1 8.648 73.3 1 K.AGNEDEAGNTYVEAYK.C * PARC_hx4_04_itms.15140.15140.2 5.1032 0.4313 100.0 1673.3121 1673.8169 8087.8 1 7.783 78.6 2 K.ALDGQYIEASDIYSK.L * PARC_hx4_04_itms.14894.14894.2 4.9366 0.3521 100.0 1489.4122 1488.65 9778.6 1 8.353 89.3 1 K.GLCQLAATDAVAAAR.T * PARC_hx4_02_itms.09926.09926.3 3.1031 0.369 100.0 2690.3044 2692.8154 7530.8 5 5.622 20.0 2 L.AATDAVAAARTLQEGQSEDPNFADSR.E * PARC_hx4_02_itms.10058.10058.2 5.4524 0.5036 100.0 1794.2522 1794.829 7343.2 1 9.7 80.0 7 R.TLQEGQSEDPNFADSR.E * PARC_hx4_04_itms.14780.14780.2 4.6239 0.5283 100.0 2130.5723 2132.2117 9923.7 1 8.974 55.6 2 K.SLIDAVNEGDSEQLSEHCK.E YGL030W 2 2 34.3% 105 11415 9.8 U RPL30 SGDID:S000002998, Chr VII from 439096-439098,439329-439643, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein; involved in pre-rRNA processing in the nucleolus; autoregulates splicing of its transcript" * PARC_hx4_04_itms.15285.15285.2 4.8486 0.4429 100.0 1817.4321 1817.9957 8744.1 1 8.623 75.0 1 K.VYYFQGGNNELGTAVGK.L * PARC_hx4_04_itms.25115.25115.2 2.3866 0.1197 97.0 1874.5521 1874.1388 4678.0 1 4.124 47.2 1 R.VGVVSILEAGDSDILTTLA.- contaminant_KERATIN08 19 28 33.7% 469 50499 5.0 U no description PARC_hx4_02_itms.10503.10503.2 2.9143 0.2184 100.0 1092.3322 1091.2273 7158.8 5 4.791 87.5 3 K.VTMQNLNDR.L PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V PARC_hx4_03_itms.10879.10879.2 3.4514 0.3442 100.0 1301.1721 1302.4241 6669.8 1 6.883 72.7 1 R.ALEEANADLEVK.I PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.T PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.T PARC_hx4_04_itms.15374.15374.1 2.2701 0.2089 100.0 1029.62 1030.2096 3903.6 89 5.083 56.2 2 R.VLDELTLAR.T PARC_hx4_04_itms.15368.15368.2 3.7512 0.2451 100.0 1030.0721 1030.2096 5093.7 1 5.656 93.8 3 R.VLDELTLAR.T PARC_hx4_04_itms.16330.16330.2 3.74 0.3273 100.0 1276.7322 1277.4755 7843.2 2 5.855 85.0 2 R.TDLEMQIEGLK.E * PARC_hx4_04_itms.14699.14699.2 4.3993 0.4465 100.0 2087.8123 2089.2415 6003.7 1 7.947 45.0 1 R.GQTGGDVNVEMDAAPGVDLSR.I * PARC_hx4_03_itms.15440.15440.1 2.4719 0.2913 100.0 1096.37 1097.2126 6560.8 1 5.503 75.0 1 R.DAETWFLSK.T * PARC_hx4_03_itms.15483.15483.2 2.8422 0.2523 100.0 1097.2122 1097.2126 6978.8 1 5.476 81.2 1 R.DAETWFLSK.T PARC_hx4_02_itms.11044.11044.1 2.1624 0.0726 98.8 1220.49 1221.3068 4399.6 20 3.473 55.0 1 K.ASLENSLEETK.G PARC_hx4_02_itms.11036.11036.2 3.3394 0.3186 100.0 1220.6921 1221.3068 7703.7 1 6.046 80.0 1 K.ASLENSLEETK.G PARC_hx4_04_itms.16322.16322.2 4.0742 0.3467 100.0 1343.3322 1343.523 9529.5 1 6.301 81.8 1 L.IGSVEEQLAQLR.C * PARC_hx4_04_itms.17874.17874.2 3.8751 0.4193 100.0 2141.4922 2142.3516 7835.2 1 8.085 62.5 1 R.CEMEQQSQEYQILLDVK.T PARC_hx4_04_itms.14835.14835.2 3.3483 0.1427 100.0 1380.5122 1380.5437 7261.5 1 5.613 85.0 3 K.TRLEQEIATYR.R PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.R PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.R * PARC_hx4_04_itms.12669.12669.2 3.85 0.4091 100.0 2350.2922 2351.4485 8247.6 1 7.122 47.6 1 R.LLEGEDAHLSSQQASGQSYSSR.E contaminant_KERATIN12 19 27 32.9% 431 47974 5.0 U no description * PARC_hx4_03_itms.10587.10587.2 2.8246 0.2598 100.0 1034.5521 1035.1112 6836.2 1 4.872 70.0 1 R.LSGGLGAGSCR.L PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.T PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.T PARC_hx4_02_itms.10526.10526.2 2.6549 0.177 100.0 994.7522 994.0923 3335.9 2 4.684 85.7 1 K.FETEQALR.L * PARC_hx4_04_itms.15132.15132.2 3.3144 0.3626 100.0 1187.2122 1187.3384 8421.7 1 6.32 80.0 1 R.LSVEADINGLR.R PARC_hx4_04_itms.15374.15374.1 2.2701 0.2089 100.0 1029.62 1030.2096 3903.6 89 5.083 56.2 2 R.VLDELTLAR.A PARC_hx4_04_itms.15368.15368.2 3.7512 0.2451 100.0 1030.0721 1030.2096 5093.7 1 5.656 93.8 3 R.VLDELTLAR.A * PARC_hx4_04_itms.16282.16282.2 4.0734 0.2239 100.0 1303.7922 1304.5011 8572.6 4 5.001 80.0 2 R.ADLEMQIENLK.E PARC_hx4_02_itms.11622.11622.1 2.3223 0.143 95.0 865.51 866.0019 3791.6 1 3.711 83.3 1 K.EELAYLK.K * PARC_hx4_03_itms.16426.16426.2 3.4788 0.3103 100.0 1145.0322 1145.2133 7467.7 1 6.91 81.2 1 K.DAEDWFFSK.T * PARC_hx4_03_itms.16411.16411.1 2.5864 0.3446 100.0 1145.58 1145.2133 5401.4 1 5.702 68.8 1 K.DAEDWFFSK.T PARC_hx4_02_itms.09010.09010.2 3.8684 0.4598 100.0 1361.6721 1362.4796 5863.7 1 8.19 75.0 2 R.EVATNSELVQSGK.S * PARC_hx4_02_itms.10955.10955.2 4.6613 0.4432 100.0 1404.5922 1404.4764 7559.8 1 8.166 79.2 1 K.ASLEGNLAETENR.Y PARC_hx4_04_itms.16322.16322.2 4.0742 0.3467 100.0 1343.3322 1343.523 9529.5 1 6.301 81.8 1 L.IGSVEEQLAQLR.C PARC_hx4_04_itms.14835.14835.2 3.3483 0.1427 100.0 1380.5122 1380.5437 7261.5 1 5.613 85.0 3 K.TRLEQEIATYR.R PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.R PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.R * PARC_hx4_04_itms.13392.13392.2 4.2195 0.4437 100.0 1517.3322 1517.6787 10363.6 1 7.8 79.2 1 R.LLEGEDAHLTQYK.K contaminant_UBIQUITIN08 2 5 32.9% 76 8565 7.2 U no description * PARC_hx4_04_itms.16113.16113.2 4.2613 0.1979 100.0 1791.5922 1788.9897 5673.0 1 5.377 70.0 4 K.TITLEVEPSDTIENVK.A PARC_hx4_02_itms.10854.10854.1 1.6715 0.1489 98.7 1081.44 1082.1986 5784.3 476 3.656 43.8 1 R.TLSDYNIQK.E YMR197C 5 15 32.3% 217 24668 6.6 U VTI1 SGDID:S000004810, Chr XIII from 659197-658544, reverse complement, Verified ORF, "Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways" * PARC_hx4_03_itms.11430.11430.2 3.9131 0.4014 100.0 1455.2522 1455.6108 4774.8 1 7.43 65.4 1 K.ASLAEAPSQPLSQR.N * PARC_hx4_04_itms.13310.13310.2 3.0711 0.3748 100.0 1343.0322 1343.4825 4551.8 1 6.104 81.8 4 K.RPLQSLVDSGDR.D * PARC_hx4_04_itms.15390.15390.2 5.4606 0.4138 100.0 1694.5322 1693.7673 9297.5 1 8.208 78.6 6 R.LFGDLNASNIDDDQR.Q * PARC_hx4_04_itms.19230.19230.2 3.8181 0.4081 100.0 1880.2922 1879.1536 6756.9 1 6.706 56.2 1 R.IANETEGIGSQIMMDLR.S * PARC_hx4_03_itms.13393.13393.2 3.4852 0.3042 100.0 1415.4521 1415.5425 6309.2 1 5.894 81.8 3 R.QTLFQADSYVDK.S contaminant_KERATIN22 28 71 31.0% 645 65865 8.0 U no description * PARC_hx4_03_itms.10946.10946.1 2.5792 0.232 100.0 1254.58 1255.3298 3589.4 1 6.184 50.0 1 R.GFSSGSAVVSGGSR.R * PARC_hx4_03_itms.10941.10941.2 4.7904 0.4787 100.0 1256.2122 1255.3298 9671.1 1 8.583 88.5 4 R.GFSSGSAVVSGGSR.R * PARC_hx4_03_itms.11792.11792.1 1.9339 0.261 100.0 831.48 831.9878 3920.0 1 4.819 62.5 2 R.SLVGLGGTK.S * PARC_hx4_04_itms.12808.12808.2 3.4016 0.2943 100.0 1127.0122 1127.1613 6713.1 1 6.325 69.2 1 F.SGGGFGGGGFGGGR.F PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 K.FASFIDK.V PARC_hx4_04_itms.13426.13426.2 4.5629 0.0087 99.8 1476.1322 1476.6726 10861.7 1 6.149 86.4 3 R.FLEQQNQVLQTK.W PARC_hx4_04_itms.13463.13463.1 3.2571 0.0225 100.0 1477.67 1476.6726 5679.3 1 4.217 63.6 2 R.FLEQQNQVLQTK.W * PARC_hx4_04_itms.14091.14091.2 4.1516 0.3618 100.0 1194.9922 1194.3329 4337.4 1 6.213 88.9 1 K.RYLDGLTAER.T * PARC_hx4_02_itms.11783.11783.2 3.6097 0.2947 100.0 1038.3522 1038.1454 3780.9 1 6.309 100.0 2 R.YLDGLTAER.T * PARC_hx4_04_itms.17427.17427.2 5.7992 0.4808 100.0 2129.3523 2129.2598 9328.0 1 9.408 61.8 4 R.TSQNSELNNMQDLVEDYK.K * PARC_hx4_04_itms.16595.16595.2 3.7396 0.3741 100.0 2256.5122 2257.4338 9543.0 1 6.638 36.1 1 R.TSQNSELNNMQDLVEDYKK.K * PARC_hx4_04_itms.13608.13608.2 3.0125 0.2221 100.0 1368.2322 1365.529 5617.9 4 4.398 63.6 1 K.RTAAENDFVTLK.K * PARC_hx4_02_itms.12201.12201.1 2.409 0.2575 100.0 1208.6 1209.3416 5753.9 1 5.541 60.0 2 R.TAAENDFVTLK.K * PARC_hx4_03_itms.12553.12553.2 3.267 0.362 100.0 1210.1921 1209.3416 5150.8 1 6.128 80.0 2 R.TAAENDFVTLK.K * PARC_hx4_04_itms.20231.20231.1 2.6236 0.0865 100.0 1460.71 1461.6982 6782.6 1 4.536 59.1 1 K.VDLLNQEIEFLK.V * PARC_hx4_04_itms.20283.20283.2 4.4964 0.0993 100.0 1460.9321 1461.6982 6843.4 1 6.344 86.4 5 K.VDLLNQEIEFLK.V PARC_hx4_04_itms.20691.20691.1 3.1164 0.1653 100.0 1329.69 1330.5211 6361.2 1 4.689 68.2 3 R.NLDLDSIIAEVK.A PARC_hx4_04_itms.20630.20630.2 4.7669 0.1939 100.0 1332.5322 1330.5211 6442.9 1 6.098 86.4 10 R.NLDLDSIIAEVK.A PARC_hx4_02_itms.09400.09400.2 3.1018 0.1596 100.0 1107.9122 1108.196 5151.7 1 6.027 93.8 4 K.AQYEEIAQR.S * PARC_hx4_02_itms.09303.09303.2 2.5742 0.2534 100.0 1176.4722 1177.256 3360.2 2 5.157 72.2 2 K.EEAEALYHSK.Y * PARC_hx4_04_itms.13487.13487.1 2.058 0.1961 100.0 1193.52 1194.33 6090.8 1 3.655 66.7 1 K.YEELQVTVGR.H * PARC_hx4_04_itms.13586.13586.2 3.9743 0.3146 100.0 1194.0122 1194.33 7496.8 1 6.679 94.4 4 K.YEELQVTVGR.H PARC_hx4_02_itms.11588.11588.2 3.1692 0.1548 100.0 974.3522 974.102 3676.0 6 4.351 92.9 2 K.IEISELNR.V * PARC_hx4_04_itms.09494.09494.2 2.3117 0.1067 98.0 995.33215 995.16675 4448.5 1 4.366 87.5 3 R.LQGEIAHVK.K * PARC_hx4_02_itms.11630.11630.2 4.2046 0.3737 100.0 1330.6122 1330.3971 6317.5 1 7.502 86.4 1 K.NVQDAIADAEQR.G * PARC_hx4_04_itms.15849.15849.1 2.2463 0.1698 100.0 1371.64 1372.5181 8110.3 2 4.543 59.1 1 K.LNDLEEALQQAK.E * PARC_hx4_03_itms.14350.14350.2 5.2752 0.2633 100.0 1373.4521 1372.5181 9337.0 1 6.476 86.4 6 K.LNDLEEALQQAK.E PARC_hx4_03_itms.12942.12942.1 3.0544 0.2551 100.0 1139.53 1140.2965 6442.4 3 5.306 75.0 1 R.DYQELMNVK.L YBR031W 7 11 27.1% 362 39092 10.6 U RPL4A SGDID:S000000235, Chr II from 300166-301254, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins" YDR012W 7 11 27.1% 362 39062 10.6 U RPL4B SGDID:S000002419, Chr IV from 471850-472938, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins" PARC_hx4_02_itms.18399.18399.2 3.6037 0.4349 100.0 1672.1122 1672.9188 7074.7 1 7.42 68.8 1 H.SLTGEATANALPLPAVF.S PARC_hx4_03_itms.10547.10547.2 2.7056 0.3361 100.0 1445.9321 1445.4911 6303.5 1 6.841 61.5 1 K.AGHQTSAESWGTGR.A PARC_hx4_04_itms.21293.21293.2 3.9078 0.4093 100.0 1883.8922 1882.2047 4665.4 1 7.507 68.8 3 K.IPEIPLVVSTDLESIQK.T PARC_hx4_04_itms.12028.12028.2 2.9273 0.2637 100.0 1011.15216 1011.16614 5148.2 1 5.473 88.9 2 K.AVGAHSDLLK.V PARC_hx4_04_itms.16110.16110.2 4.5527 0.4209 100.0 1474.2722 1474.697 6714.6 1 8.829 69.2 2 R.GPLVVYAEDNGIVK.A PARC_hx4_04_itms.13858.13858.2 4.5899 0.5417 100.0 1507.2722 1507.6403 6074.3 1 9.014 76.9 1 K.LDQVWGSETVASSK.V PARC_hx4_04_itms.14314.14314.2 4.3086 0.3946 100.0 1331.5922 1331.5118 9492.4 1 6.94 86.4 1 R.IINSSEIQSAIR.P contaminant_KERATIN18 19 43 24.4% 562 59822 8.0 U no description * PARC_hx4_04_itms.12508.12508.2 3.4776 0.4057 100.0 1669.7922 1668.7324 7671.4 1 7.208 50.0 1 R.SRGSGGLGGACGGAGFGSR.S * PARC_hx4_04_itms.12530.12530.2 3.2917 0.4006 100.0 1425.4122 1425.4668 8399.1 1 7.107 56.2 1 R.GSGGLGGACGGAGFGSR.S PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 K.FASFIDK.V PARC_hx4_04_itms.15286.15286.2 3.3799 0.0726 99.8 1203.9321 1204.3684 7957.3 2 5.349 83.3 2 K.WTLLQEQGTK.T PARC_hx4_02_itms.11277.11277.2 1.8497 0.2572 98.9 1017.0722 1017.1271 2816.6 5 5.414 81.2 1 R.QLDSIVGER.G * PARC_hx4_03_itms.15385.15385.2 3.3143 0.1924 100.0 1204.7922 1205.3685 6741.8 7 4.837 77.8 2 R.NMQDLVEDLK.N PARC_hx4_04_itms.14084.14084.2 3.1428 0.1968 100.0 1379.3922 1379.5559 7381.3 1 4.778 68.2 1 K.RTAAENEFVTLK.K PARC_hx4_03_itms.12685.12685.2 3.1848 0.2643 100.0 1224.4521 1223.3684 6226.5 4 5.657 75.0 2 R.TAAENEFVTLK.K PARC_hx4_03_itms.16912.16912.2 3.7082 0.2235 100.0 1407.9521 1408.551 8260.0 1 5.123 72.7 4 K.ADTLTDEINFLR.A PARC_hx4_04_itms.18894.18894.1 1.9592 0.1224 98.6 1408.53 1408.551 3779.0 4 3.936 45.5 1 K.ADTLTDEINFLR.A PARC_hx4_04_itms.20691.20691.1 3.1164 0.1653 100.0 1329.69 1330.5211 6361.2 1 4.689 68.2 3 R.NLDLDSIIAEVK.A PARC_hx4_04_itms.20630.20630.2 4.7669 0.1939 100.0 1332.5322 1330.5211 6442.9 1 6.098 86.4 10 R.NLDLDSIIAEVK.A PARC_hx4_02_itms.09400.09400.2 3.1018 0.1596 100.0 1107.9122 1108.196 5151.7 1 6.027 93.8 4 K.AQYEEIAQR.S PARC_hx4_02_itms.11092.11092.2 3.1685 0.3357 100.0 1213.1122 1213.2891 6956.4 1 6.431 83.3 1 R.AEAESWYQTK.Y PARC_hx4_02_itms.11127.11127.1 2.2501 0.3841 100.0 1214.1 1213.2891 3904.8 33 6.32 61.1 1 R.AEAESWYQTK.Y PARC_hx4_03_itms.13627.13627.2 4.0278 0.4065 100.0 1659.8922 1659.7625 9241.5 1 7.678 67.9 3 K.QCANLQAAIADAEQR.G PARC_hx4_04_itms.15466.15466.2 3.7668 0.2034 100.0 1357.9321 1358.5345 8190.4 1 5.125 81.8 3 K.NKLEGLEDALQK.A PARC_hx4_03_itms.13020.13020.1 1.9766 0.1656 100.0 1115.43 1116.2566 8574.4 5 4.428 61.1 1 K.LEGLEDALQK.A PARC_hx4_03_itms.13035.13035.2 3.5326 0.3385 100.0 1116.2122 1116.2566 4302.1 1 5.641 88.9 1 K.LEGLEDALQK.A YGL212W 8 14 23.4% 316 36711 8.4 U VAM7 SGDID:S000003180, Chr VII from 91436-92386, Verified ORF, "Component of the vacuole SNARE complex involved in vacuolar morphogenesis; SNAP-25 homolog; functions with a syntaxin homolog Vam3p in vacuolar protein trafficking" * PARC_hx4_04_itms.14475.14475.1 2.0611 0.1867 100.0 1240.53 1241.4294 7936.0 1 4.563 65.0 1 K.YVLYGVSTPNK.R * PARC_hx4_04_itms.14458.14458.2 3.5682 0.3211 100.0 1241.4521 1241.4294 7021.7 1 7.027 90.0 1 K.YVLYGVSTPNK.R * PARC_hx4_04_itms.15188.15188.1 2.0357 0.0562 95.3 1183.45 1184.2938 4056.3 192 3.424 56.2 1 R.FLNELYNDR.F * PARC_hx4_03_itms.13553.13553.2 3.474 0.2284 100.0 1184.3922 1184.2938 6502.8 1 4.839 93.8 4 R.FLNELYNDR.F * PARC_hx4_04_itms.16048.16048.2 3.6143 0.182 100.0 1163.0721 1163.3593 7999.7 1 5.109 77.8 2 K.IAQDFLQLSK.P * PARC_hx4_03_itms.11841.11841.2 5.1675 0.4885 100.0 1836.4122 1835.9658 7705.4 1 10.716 64.7 3 R.LLGVATSDNSSTTEVQGR.T * PARC_hx4_03_itms.11855.11855.2 3.9949 0.3115 100.0 1338.6921 1338.463 8794.6 1 6.852 85.0 1 R.DQEQELVALHR.I * PARC_hx4_03_itms.16170.16170.2 3.2091 0.3864 100.0 1660.5922 1661.7631 6074.7 1 6.273 50.0 1 N.ELLTALEDDVDNTGR.R YOR234C 2 2 22.4% 107 12168 11.1 U RPL33B SGDID:S000005760, Chr XV from 779405-779387,778859-778555, reverse complement, Verified ORF, "Ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Ap and has similarity to rat L35a; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable" * PARC_hx4_04_itms.16422.16422.2 2.355 0.1433 97.7 1751.2322 1751.9768 6358.7 7 3.906 43.3 1 K.IEGVATPQEAQFYLGK.R PARC_hx4_02_itms.16214.16214.1 1.7047 0.1019 95.2 966.37 967.1528 4700.8 30 3.43 64.3 1 R.IFLYPSNI.- YPL143W 2 4 22.4% 107 12154 11.1 U RPL33A SGDID:S000006064, Chr XVI from 282121-282139,282665-282969, Verified ORF, "N-terminally acetylated ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Bp and has similarity to rat L35a; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable" * PARC_hx4_04_itms.16247.16247.2 3.5641 0.3558 100.0 1740.1721 1737.95 7405.0 1 6.746 60.0 3 K.IEGVATPQDAQFYLGK.R PARC_hx4_02_itms.16214.16214.1 1.7047 0.1019 95.2 966.37 967.1528 4700.8 30 3.43 64.3 1 R.IFLYPSNI.- contaminant_KERATIN17 15 35 22.0% 590 62461 8.1 U no description * PARC_hx4_04_itms.13541.13541.2 2.838 0.2707 100.0 1410.4122 1411.5547 6369.1 1 5.318 69.2 2 R.SFSTASAITPSVSR.T * PARC_hx4_04_itms.13314.13314.2 4.2578 0.4106 100.0 1411.1122 1411.5236 7128.5 1 9.078 78.6 1 R.VSLAGACGVGGYGSR.S PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 K.FASFIDK.V PARC_hx4_04_itms.15286.15286.2 3.3799 0.0726 99.8 1203.9321 1204.3684 7957.3 2 5.349 83.3 2 K.WTLLQEQGTK.T PARC_hx4_02_itms.11277.11277.2 1.8497 0.2572 98.9 1017.0722 1017.1271 2816.6 5 5.414 81.2 1 R.QLDSIVGER.G * PARC_hx4_03_itms.15716.15716.2 4.081 0.1164 100.0 1238.6122 1239.3856 8226.6 2 6.523 88.9 3 R.NMQDLVEDFK.N * PARC_hx4_04_itms.17591.17591.1 3.1225 0.1074 100.0 1239.44 1239.3856 5464.6 7 5.356 72.2 1 R.NMQDLVEDFK.N PARC_hx4_02_itms.08900.08900.2 3.0627 0.1925 100.0 1153.3722 1153.234 5860.0 4 4.708 87.5 5 K.NKYEDEINK.R * PARC_hx4_03_itms.14036.14036.2 3.019 0.2177 100.0 1283.0122 1283.4822 6454.8 7 5.424 65.0 2 R.TTAENEFVMLK.K * PARC_hx4_04_itms.19487.19487.2 2.6314 0.2151 99.8 1429.1721 1426.6858 8802.9 1 5.376 68.2 1 K.VDALMDEINFMK.M PARC_hx4_04_itms.20691.20691.1 3.1164 0.1653 100.0 1329.69 1330.5211 6361.2 1 4.689 68.2 3 R.NLDLDSIIAEVK.A PARC_hx4_04_itms.20630.20630.2 4.7669 0.1939 100.0 1332.5322 1330.5211 6442.9 1 6.098 86.4 10 R.NLDLDSIIAEVK.A * PARC_hx4_02_itms.10282.10282.2 3.0333 0.2256 98.5 1228.9722 1229.3353 7832.3 1 4.856 75.0 1 N.LQNAIADAEQR.G * PARC_hx4_03_itms.13081.13081.1 2.244 0.0823 98.7 1143.18 1144.3104 8893.7 34 3.851 55.6 1 K.LAELEEALQK.A * PARC_hx4_03_itms.13066.13066.2 3.986 0.2539 100.0 1144.0521 1144.3104 7970.1 1 5.109 88.9 1 K.LAELEEALQK.A YIL148W 2 3 19.5% 128 14554 9.8 U RPL40A SGDID:S000001410, Chr IX from 68708-68715,69150-69528, Verified ORF, "Fusion protein, identical to Rpl40Bp, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes" YLR167W 2 3 16.4% 152 17216 9.9 U RPS31 SGDID:S000004157, Chr XII from 498949-499407, Verified ORF, "Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B" YLL039C 2 15 6.6% 381 42826 7.6 U UBI4 SGDID:S000003962, Chr XII from 65206-64061, reverse complement, Verified ORF, "Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response" YKR094C 2 3 19.5% 128 14554 9.8 U RPL40B SGDID:S000001802, Chr XI from 618392-618385,618016-617638, reverse complement, Verified ORF, "Fusion protein, identical to Rpl40Ap, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes" PARC_hx4_04_itms.15400.15400.2 4.7821 0.4112 100.0 1765.5322 1764.9244 9480.6 1 7.912 70.0 2 K.TITLEVESSDTIDNVK.S PARC_hx4_02_itms.10854.10854.1 1.6715 0.1489 98.7 1081.44 1082.1986 5784.3 476 3.656 43.8 1 R.TLSDYNIQK.E YMR194W 3 3 19.0% 100 11124 11.6 U RPL36A SGDID:S000004807, Chr XIII from 651144-651159,651623-651909, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Bp and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA" YPL249C-A 3 3 19.0% 100 11135 11.6 U RPL36B SGDID:S000006438, Chr XVI from 76239-76224,75985-75699, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA" PARC_hx4_04_itms.13709.13709.1 2.4406 0.0759 100.0 886.56 887.0672 7739.0 1 4.734 75.0 1 K.TGIAIGLNK.G PARC_hx4_04_itms.13716.13716.2 2.9253 0.1344 99.8 887.09216 887.0672 5405.4 2 4.674 87.5 1 K.TGIAIGLNK.G PARC_hx4_03_itms.12366.12366.2 2.4876 0.1792 99.4 1134.6122 1135.2621 3891.4 2 4.21 72.2 1 R.EIAGLSPYER.R YDL082W 2 3 17.6% 199 22554 11.2 U RPL13A SGDID:S000002240, Chr IV from 308424-308427,308793-309388, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp; not essential for viability; has similarity to rat L13 ribosomal protein" YMR142C 2 3 17.6% 199 22525 11.1 U RPL13B SGDID:S000004750, Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein" PARC_hx4_04_itms.12519.12519.2 2.8429 0.1909 100.0 982.1122 982.1276 5381.7 1 5.555 87.5 2 R.TIGIAVDHR.R PARC_hx4_04_itms.19594.19594.2 4.3244 0.501 100.0 2655.5522 2654.9365 7306.7 1 7.843 32.0 1 K.APEAEQVLSAAATFPIAQPATDVEAR.A contaminant_gi|7463016|pir||S77957 15 26 16.7% 269 27961 6.7 U lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes * PARC_hx4_04_itms.13629.13629.2 3.4924 0.3532 100.0 1491.0122 1491.5688 6232.1 1 6.947 85.0 1 V.VYWNYQNSTCR.A * PARC_hx4_04_itms.11762.11762.2 3.254 0.4033 100.0 1228.8322 1229.2604 5968.5 1 6.606 100.0 3 Y.WNYQNSTCR.A * PARC_hx4_02_itms.11271.11271.2 5.2133 0.479 100.0 1748.8522 1749.8718 3858.8 1 8.341 70.6 3 S.GGVTEPGSSGSPIYSPEK.R * PARC_hx4_04_itms.15048.15048.1 3.0902 0.3048 100.0 1307.07 1306.4149 5043.7 2 5.663 58.3 1 E.PGSSGSPIYSPEK.R * PARC_hx4_02_itms.10458.10458.1 2.1855 0.2225 100.0 1151.41 1152.2462 4847.9 4 5.244 55.0 1 G.SSGSPIYSPEK.R * PARC_hx4_02_itms.10444.10444.2 2.7499 0.2606 98.5 1152.3121 1152.2462 5396.3 2 5.884 65.0 1 G.SSGSPIYSPEK.R * PARC_hx4_02_itms.10484.10484.1 2.3161 0.2639 100.0 1064.53 1065.1681 4645.4 3 5.183 55.6 1 S.SGSPIYSPEK.R * PARC_hx4_04_itms.12338.12338.2 2.9321 0.2973 100.0 965.1122 965.0971 3336.6 1 5.623 77.8 1 R.VLGQLHGGPS.S * PARC_hx4_04_itms.12390.12390.1 2.574 0.3921 100.0 1051.59 1052.1753 6322.2 1 6.509 60.0 2 R.VLGQLHGGPSS.C * PARC_hx4_04_itms.12258.12258.2 3.6972 0.2657 100.0 1055.1322 1052.1753 4468.7 1 6.158 85.0 4 R.VLGQLHGGPSS.C * PARC_hx4_04_itms.12314.12314.2 4.0628 0.4605 100.0 1211.6322 1212.3141 7173.9 1 8.409 95.5 3 R.VLGQLHGGPSSC.S * PARC_hx4_04_itms.12330.12330.1 3.1389 0.3227 100.0 1213.55 1212.3141 6023.9 1 6.805 63.6 2 R.VLGQLHGGPSSC.S * PARC_hx4_04_itms.12410.12410.2 3.5171 0.3338 100.0 1369.7522 1370.4711 8110.3 1 7.754 80.8 1 R.VLGQLHGGPSSCSA.T * PARC_hx4_04_itms.12392.12392.2 3.4802 0.466 100.0 1471.3322 1471.5762 5715.1 1 7.449 60.7 1 R.VLGQLHGGPSSCSAT.G * PARC_hx4_04_itms.12430.12430.2 3.5993 0.4248 100.0 1527.5721 1528.628 7368.4 1 7.289 60.0 1 R.VLGQLHGGPSSCSATG.A YHL033C 4 6 16.4% 256 28125 10.0 U RPL8A SGDID:S000001025, Chr VIII from 36023-35253, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits" YLL045C 4 6 16.4% 256 28112 10.0 U RPL8B SGDID:S000003968, Chr XII from 48628-47858, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits" PARC_hx4_04_itms.13652.13652.2 3.9149 0.3049 100.0 1159.2322 1159.3304 7001.1 1 6.178 85.0 2 K.NFGIGQAVQPK.R PARC_hx4_03_itms.10872.10872.2 2.2761 0.2783 100.0 873.1922 873.0403 2416.2 2 5.362 92.9 1 R.LGTLVNQK.T PARC_hx4_03_itms.12858.12858.2 4.0913 0.374 100.0 1118.4321 1118.2755 8401.7 1 7.775 90.0 2 K.TSAVAALTEVR.A PARC_hx4_04_itms.14313.14313.2 3.523 0.3372 100.0 1294.0521 1294.4473 6303.4 1 6.785 77.3 1 K.LVSTIDANFADK.Y contaminant_KERATIN07 12 18 16.1% 473 50915 5.5 U no description PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V PARC_hx4_03_itms.10879.10879.2 3.4514 0.3442 100.0 1301.1721 1302.4241 6669.8 1 6.883 72.7 1 R.ALEEANADLEVK.I * PARC_hx4_04_itms.17940.17940.2 2.9764 0.2175 100.0 2066.7122 2065.3774 5296.4 1 5.002 47.2 1 K.IIAATIENAQPILQIDNAR.L PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.T PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.T PARC_hx4_04_itms.15374.15374.1 2.2701 0.2089 100.0 1029.62 1030.2096 3903.6 89 5.083 56.2 2 R.VLDELTLAR.T PARC_hx4_04_itms.15368.15368.2 3.7512 0.2451 100.0 1030.0721 1030.2096 5093.7 1 5.656 93.8 3 R.VLDELTLAR.T PARC_hx4_02_itms.11044.11044.1 2.1624 0.0726 98.8 1220.49 1221.3068 4399.6 20 3.473 55.0 1 K.ASLENSLEETK.G PARC_hx4_02_itms.11036.11036.2 3.3394 0.3186 100.0 1220.6921 1221.3068 7703.7 1 6.046 80.0 1 K.ASLENSLEETK.G PARC_hx4_04_itms.14835.14835.2 3.3483 0.1427 100.0 1380.5122 1380.5437 7261.5 1 5.613 85.0 3 K.TRLEQEIATYR.R PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.R PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.R YGL103W 2 4 16.1% 149 16722 10.6 U RPL28 SGDID:S000003071, Chr VII from 310970-311018,311530-311930, Verified ORF, "Ribosomal protein L29 of the large (60S) ribosomal subunit, has similarity to E. coli L15 and rat L27a ribosomal proteins; may have peptidyl transferase activity; can mutate to cycloheximide resistance" * PARC_hx4_04_itms.18119.18119.2 2.384 0.04 96.6 1115.3522 1115.3147 5431.8 23 3.412 75.0 1 K.LWTLIPEDK.R * PARC_hx4_04_itms.16366.16366.2 3.1927 0.4288 100.0 1508.2122 1506.6958 10204.5 1 7.069 60.7 3 K.ETAPVIDTLAAGYGK.I YJL177W 2 2 15.8% 184 20551 10.9 U RPL17B SGDID:S000003713, Chr X from 90784-91092,91410-91655, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins" YKL180W 2 2 15.8% 184 20549 10.9 U RPL17A SGDID:S000001663, Chr XI from 109274-109582,109889-110134, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the components of the outer kinetochore DASH complex" PARC_hx4_04_itms.15161.15161.2 3.0707 0.2528 100.0 1463.4122 1461.6146 8173.7 1 5.204 62.5 1 R.ETAQAINGWELTK.A PARC_hx4_04_itms.15838.15838.2 4.7889 0.3473 100.0 1646.2722 1645.8558 11752.9 1 7.299 70.0 1 K.FVQGLLQNAAANAEAK.G YOL127W 2 3 15.5% 142 15758 10.1 U RPL25 SGDID:S000005487, Chr XV from 80347-80359,80774-81189, Verified ORF, "Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 26S rRNA via a conserved C-terminal motif" * PARC_hx4_03_itms.14257.14257.1 2.9309 0.0991 100.0 1107.57 1108.2769 4198.5 6 4.319 75.0 1 K.ELYEVDVLK.V * PARC_hx4_03_itms.13956.13956.2 4.7574 0.464 100.0 1451.1921 1451.576 10432.4 1 8.812 83.3 2 R.LTADYDALDIANR.I YDR229W 4 6 15.0% 453 49976 5.0 U IVY1 SGDID:S000002637, Chr IV from 924779-926140, Verified ORF, "Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase" * PARC_hx4_04_itms.14478.14478.2 2.6997 0.0606 96.9 1775.1322 1773.8156 7991.4 1 3.985 67.9 1 R.VDWDNGNHFDVSPDR.Y * PARC_hx4_03_itms.14466.14466.2 3.4215 0.3679 100.0 1261.9922 1261.4178 7147.4 1 6.259 70.0 3 K.ETQEALSTLLR.N * PARC_hx4_04_itms.26493.26493.2 3.069 0.3616 100.0 2634.7722 2631.8523 8564.7 1 6.079 38.1 1 K.YFNDLLGDNLIDDIDEFELQTK.I * PARC_hx4_04_itms.21413.21413.2 3.19 0.3079 100.0 2139.4521 2140.2336 6079.3 1 6.602 44.7 1 K.GWSGGGLDELLCDADDPFSK.K YLR448W 3 3 14.8% 176 19986 10.1 U RPL6B SGDID:S000004440, Chr XII from 1028849-1028863,1029248-1029763, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA" YML073C 3 3 14.8% 176 19961 10.1 U RPL6A SGDID:S000004538, Chr XIII from 124172-124158,123742-123227, reverse complement, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA" PARC_hx4_03_itms.10614.10614.1 1.8356 0.1339 98.6 882.5 883.0324 4337.7 12 4.071 71.4 1 R.YVIATSTK.V PARC_hx4_02_itms.10956.10956.2 2.9296 0.2859 100.0 1060.3722 1060.1925 7603.0 1 6.298 83.3 1 K.VSVEGVNVEK.F PARC_hx4_04_itms.15798.15798.2 2.8129 0.1897 100.0 1017.4122 1018.15704 5779.3 1 4.74 85.7 1 K.FNVEYFAK.E contaminant_KERATIN10 10 15 14.5% 400 44106 5.1 U no description PARC_hx4_02_itms.10712.10712.1 2.3162 0.1218 100.0 809.56 809.93774 7096.9 31 4.467 75.0 1 R.LASYLDK.V PARC_hx4_02_itms.10832.10832.1 1.7519 0.1657 100.0 807.44 807.8815 3072.4 11 3.857 58.3 1 R.LAADDFR.T PARC_hx4_02_itms.10857.10857.2 2.5052 0.1433 99.8 808.1122 807.8815 2953.5 2 4.677 83.3 2 R.LAADDFR.T PARC_hx4_02_itms.10526.10526.2 2.6549 0.177 100.0 994.7522 994.0923 3335.9 2 4.684 85.7 1 K.FETEQALR.M PARC_hx4_04_itms.15374.15374.1 2.2701 0.2089 100.0 1029.62 1030.2096 3903.6 89 5.083 56.2 2 R.VLDELTLAR.T PARC_hx4_04_itms.15368.15368.2 3.7512 0.2451 100.0 1030.0721 1030.2096 5093.7 1 5.656 93.8 3 R.VLDELTLAR.T PARC_hx4_04_itms.16330.16330.2 3.74 0.3273 100.0 1276.7322 1277.4755 7843.2 2 5.855 85.0 2 R.TDLEMQIEGLK.E PARC_hx4_02_itms.11622.11622.1 2.3223 0.143 95.0 865.51 866.0019 3791.6 1 3.711 83.3 1 K.EELAYLK.K PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.S PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.S YHL001W 2 2 13.8% 138 15153 10.9 U RPL14B SGDID:S000000993, Chr VIII from 104272-104400,104799-105086, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Ap and has similarity to rat L14 ribosomal protein" YKL006W 2 2 13.8% 138 15167 10.9 U RPL14A SGDID:S000001489, Chr XI from 431549-431677,432076-432363, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Bp and has similarity to rat L14 ribosomal protein; rpl14a csh5 double null mutant exhibits synthetic slow growth" PARC_hx4_04_itms.18161.18161.2 3.7826 0.3278 100.0 1213.6522 1213.46 6090.4 1 6.299 85.0 1 K.LAAIVEIIDQK.K PARC_hx4_02_itms.11780.11780.1 1.6418 0.1413 98.7 922.49 923.0135 3705.4 20 3.641 50.0 1 R.AALTDFER.F YML028W 2 3 12.8% 196 21590 5.1 U TSA1 SGDID:S000004490, Chr XIII from 220138-220728, Verified ORF, "Ubiquitous housekeeping thioredoxin peroxidase, reduces reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; mediates redox regulation of the nuclear localization of Yap1p; deletion results in mutator phenotype" * PARC_hx4_04_itms.17835.17835.2 4.5421 0.4583 100.0 1594.3922 1594.7588 8645.9 1 9.163 75.0 2 K.TAVVDGVFDEVSLDK.Y * PARC_hx4_04_itms.16548.16548.2 3.9536 0.284 100.0 1237.3121 1237.3977 6449.0 1 6.937 88.9 1 R.LVEAFQWTDK.N YBR221C 3 4 12.3% 366 40054 5.3 U PDB1 SGDID:S000000425, Chr II from 666248-665148, reverse complement, Verified ORF, "E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved multi-protein complex found in mitochondria" * PARC_hx4_03_itms.18033.18033.2 3.0485 0.2526 100.0 2147.132 2147.3025 8469.5 1 5.73 50.0 1 R.DDDVFLIGEEVAQYNGAYK.V * PARC_hx4_04_itms.15640.15640.2 2.5485 0.2735 100.0 1221.0122 1221.3989 8456.4 1 5.306 70.0 1 K.YGVSAEVINLR.S * PARC_hx4_04_itms.18968.18968.2 3.1201 0.2002 100.0 1722.4722 1722.9324 10021.0 3 5.496 46.4 2 K.ELEDFAFPDTPTIVK.A YLR447C 2 2 11.6% 345 39791 4.6 U VMA6 SGDID:S000004439, Chr XII from 1027889-1026852, reverse complement, Verified ORF, "Subunit D of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found in the endomembrane system; stabilizes VO subunits; required for V1 domain assembly on the vacuolar membrane" * PARC_hx4_04_itms.19481.19481.2 3.4097 0.1825 100.0 2568.132 2567.7786 8239.8 1 5.038 35.7 1 R.NGLLSNNQYINLTQCDTLEDLK.L * PARC_hx4_04_itms.19599.19599.2 3.5739 0.2725 100.0 2198.6921 2199.36 8227.6 1 6.612 61.8 1 K.NCFDTAEELDDMNIEIIR.N YGL076C 2 3 11.1% 244 27638 10.1 U RPL7A SGDID:S000003044, Chr VII from 365999-365989,365529-365436,364967-364338, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" YPL198W 2 3 11.1% 244 27696 10.1 U RPL7B SGDID:S000006119, Chr XVI from 173151-173161,173571-173664,174072-174701, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" PARC_hx4_04_itms.16184.16184.2 4.4382 0.4463 100.0 1553.4521 1554.7838 7962.2 1 8.967 82.1 2 R.VPLSDNAIIEANLGK.Y PARC_hx4_04_itms.13876.13876.2 2.7672 0.2939 100.0 1226.6322 1227.3652 5733.4 1 5.83 77.3 1 K.LSNPSGGWGVPR.K YKL196C 2 2 11.0% 200 22707 5.7 U YKT6 SGDID:S000001679, Chr XI from 75539-74937, reverse complement, Verified ORF, "Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus" * PARC_hx4_04_itms.19371.19371.2 3.5606 0.3168 100.0 1245.8722 1246.3647 6573.2 1 5.938 88.9 1 K.DLSQFGFFER.S * PARC_hx4_04_itms.15228.15228.2 3.2554 0.3799 100.0 1291.9521 1292.4382 6171.3 2 6.871 77.3 1 R.SEGICGVLITDK.E YLL024C 5 5 10.5% 639 69470 5.1 U SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall" PARC_hx4_02_itms.10230.10230.2 2.8363 0.0809 98.6 1215.5122 1215.3085 5943.4 5 3.675 70.0 1 R.VDIIANDQGNR.T * PARC_hx4_04_itms.15735.15735.2 2.9826 0.389 100.0 1457.6721 1458.5676 4090.5 1 6.236 70.8 1 R.TTPSFVGFTDTER.L PARC_hx4_04_itms.16432.16432.2 3.1876 0.3843 100.0 1895.6921 1896.0667 4798.1 1 5.968 43.8 1 K.VNDAVVTVPAYFNDSQR.Q PARC_hx4_04_itms.17129.17129.2 4.7445 0.4895 100.0 1661.3922 1660.9078 5060.3 1 8.529 80.0 1 R.IINEPTAAAIAYGLDK.K PARC_hx4_04_itms.18185.18185.2 3.416 0.3219 100.0 1300.4122 1300.4198 6614.6 1 6.035 83.3 1 R.FEELCADLFR.S contaminant_INT-STD1 6 9 10.2% 607 69271 6.1 U BSA * PARC_hx4_04_itms.15938.15938.1 2.6213 0.1858 100.0 1163.57 1164.344 9362.3 1 5.711 72.2 1 K.LVNELTEFAK.T * PARC_hx4_04_itms.15928.15928.2 3.1396 0.178 100.0 1164.3522 1164.344 4781.9 1 5.199 88.9 1 K.LVNELTEFAK.T * PARC_hx4_03_itms.16606.16606.2 2.5722 0.1397 98.5 1957.6122 1957.1443 4032.3 1 4.293 52.9 2 K.DAIPENLPPLTADFAEDK.D * PARC_hx4_04_itms.17891.17891.2 3.9731 0.3282 100.0 1480.2922 1480.7068 7297.1 1 6.295 66.7 2 K.LGEYGFQNALIVR.Y * PARC_hx4_04_itms.14940.14940.2 3.3706 0.3505 100.0 1514.5521 1512.7465 6819.8 1 7.069 76.9 1 K.VPQVSTPTLVEVSR.S * PARC_hx4_04_itms.11892.11892.2 2.3972 0.0897 98.6 898.6722 899.0441 3587.9 3 3.361 91.7 2 R.LCVLHEK.T YJL172W 3 3 9.5% 576 64597 5.5 U CPS1 SGDID:S000003708, Chr X from 97731-99461, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions" * PARC_hx4_04_itms.22167.22167.2 4.987 0.3889 100.0 2319.5322 2319.4988 8466.4 1 7.681 57.5 1 R.YGDDGIYSIIDEGEGIMEVDK.D * PARC_hx4_03_itms.12513.12513.2 3.1253 0.3563 100.0 1315.5721 1316.4973 8168.8 1 5.989 66.7 1 R.TTQAVDIINGGVK.A * PARC_hx4_04_itms.21946.21946.2 2.4912 0.2431 99.8 2397.4521 2398.675 5914.7 3 5.032 30.0 1 K.NGDDYIIPETELGHIDITLLR.E YJL034W 4 7 9.1% 682 74468 4.9 U KAR2 SGDID:S000003571, Chr X from 381243-383291, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p" contaminant_GR78_YEAST 4 7 9.1% 682 74468 4.9 U owl|P16474| 78 KD GLUCOSE REGULATED PROTEIN HOMOLOG PRECURSOR (GRP 78) (IMMUNOGLOBULIN... PARC_hx4_04_itms.15023.15023.2 3.5621 0.4043 100.0 1514.4122 1514.6317 4343.5 1 7.044 70.8 2 R.ITPSYVAFTDDER.L PARC_hx4_04_itms.16268.16268.2 4.9843 0.3737 100.0 1673.3922 1673.8662 7664.2 1 8.073 85.7 2 K.NQVAANPQNTIFDIK.R PARC_hx4_04_itms.16514.16514.2 4.8742 0.4915 100.0 1645.7522 1646.881 5072.4 1 9.072 76.7 2 R.IVNEPTAAAIAYGLDK.S PARC_hx4_04_itms.21786.21786.2 2.1565 0.1576 97.1 2026.2322 2024.2323 7978.5 1 3.998 50.0 1 R.IEIDSFVDGIDLSETLTR.A YHR052W 2 2 9.0% 376 42530 8.8 U CIC1 SGDID:S000001094, Chr VIII from 210842-211972, Verified ORF, "Essential protein that interacts with proteasome components and has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles" * PARC_hx4_04_itms.18912.18912.2 3.8682 0.3979 100.0 1572.1322 1572.8395 7713.3 1 7.451 71.4 1 F.SLILADDSIVTSLPK.L * PARC_hx4_04_itms.21180.21180.2 3.3044 0.4217 100.0 2206.2522 2207.485 8234.7 1 7.041 41.7 1 R.SPVLPLYYNQDVLDELEAK.K YDR481C 3 7 8.0% 566 63004 5.6 U PHO8 SGDID:S000002889, Chr IV from 1420240-1418540, reverse complement, Verified ORF, "Repressible alkaline phosphatase, a glycoprotein localized to the vacuole; regulated by levels of inorganic phosphate and by a system consisting of Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides" * PARC_hx4_03_itms.15587.15587.2 4.9651 0.422 100.0 1966.7922 1967.0587 9857.4 1 8.239 62.5 4 R.DLIDEAQSNGWQYVGDR.K * PARC_hx4_03_itms.17236.17236.2 2.8685 0.2005 99.8 1459.8121 1459.6166 9421.9 2 5.059 62.5 1 K.DSNGFFLMVEGSR.I * PARC_hx4_03_itms.09962.09962.2 3.5902 0.4884 100.0 1646.4122 1645.7317 4926.3 1 7.95 75.0 2 R.IDHAGHQNDPASQVR.E YGR086C 2 2 8.0% 339 38349 4.6 U PIL1 SGDID:S000003318, Chr VII from 650621-649602, reverse complement, Verified ORF, "Long chain base-responsive inhibitor of protein kinases Pkh1p and Pkh2p, acts along with Lsp1p to down-regulate heat stress resistance via regulation of the Pkc1p and Ypk1p pathways; phosphorylated by Phk1p and Phk2p" * PARC_hx4_04_itms.15935.15935.2 2.9527 0.2248 100.0 1228.4922 1228.4313 6578.0 2 4.828 83.3 1 K.IEVLEQELVR.A PARC_hx4_04_itms.16803.16803.2 3.6616 0.3502 100.0 1801.1721 1802.9792 8065.6 1 6.873 56.2 1 R.AEAESLVAEAQLSNITR.S contaminant_KERATIN04 6 10 7.6% 458 49644 4.9 U no description PARC_hx4_03_itms.10879.10879.2 3.4514 0.3442 100.0 1301.1721 1302.4241 6669.8 1 6.883 72.7 1 R.ALEEANADLEVK.I PARC_hx4_04_itms.12885.12885.2 2.9352 0.3256 100.0 1357.8922 1358.4972 7948.6 1 6.098 77.3 2 L.RQSVEADINGLR.R PARC_hx4_02_itms.12008.12008.2 3.1018 0.241 100.0 1201.7722 1202.3097 3922.6 1 5.725 95.0 2 R.QSVEADINGLR.R PARC_hx4_04_itms.14835.14835.2 3.3483 0.1427 100.0 1380.5122 1380.5437 7261.5 1 5.613 85.0 3 K.TRLEQEIATYR.S PARC_hx4_02_itms.10815.10815.1 2.1175 0.0706 98.7 1122.39 1123.2511 5547.9 1 4.167 75.0 1 R.LEQEIATYR.S PARC_hx4_02_itms.10808.10808.2 3.2886 0.1594 100.0 1123.9122 1123.2511 6714.1 1 5.616 93.8 1 R.LEQEIATYR.S YLR340W 3 5 7.4% 312 33717 4.8 U RPP0 SGDID:S000004332, Chr XII from 805887-806825, Verified ORF, "Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphorylated on serine 302" * PARC_hx4_04_itms.19422.19422.1 2.4368 0.2843 100.0 1267.51 1268.4088 7492.1 1 4.892 70.0 1 R.GFLSDLPDFEK.L * PARC_hx4_04_itms.19436.19436.2 3.4645 0.2081 100.0 1268.3121 1268.4088 5923.6 2 5.231 75.0 1 R.GFLSDLPDFEK.L * PARC_hx4_04_itms.16190.16190.2 3.7797 0.3905 100.0 1284.4321 1284.4575 4021.6 1 6.676 77.3 3 R.AGAVAPEDIWVR.A contaminant_KERATIN15 6 33 7.3% 629 64511 6.5 U no description PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 K.FASFIDK.V PARC_hx4_04_itms.13564.13564.2 4.682 0.2398 100.0 1477.1721 1477.7007 8836.4 1 6.536 86.4 8 R.FLEQQNKVLETK.W * PARC_hx4_04_itms.20652.20652.1 3.0356 0.2519 100.0 1304.56 1303.4521 11171.6 2 5.438 58.3 8 R.SLDLDSIIAEVGA.Q * PARC_hx4_04_itms.20760.20760.2 5.2761 0.3543 100.0 1306.3522 1303.4521 8134.0 1 6.629 79.2 10 R.SLDLDSIIAEVGA.Q * PARC_hx4_04_itms.20907.20907.3 3.4469 0.3042 100.0 1954.3444 1952.1223 8863.4 3 5.613 33.8 5 R.SLDLDSIIAEVGAQYEDI.A PARC_hx4_03_itms.12942.12942.1 3.0544 0.2551 100.0 1139.53 1140.2965 6442.4 3 5.306 75.0 1 R.DYQELMNVK.L YGR192C 2 2 7.2% 332 35747 7.0 U TDH3 SGDID:S000003424, Chr VII from 883815-882817, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " YJR009C 2 2 7.2% 332 35847 7.0 U TDH2 SGDID:S000003769, Chr X from 454595-453597, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " PARC_hx4_04_itms.16182.16182.2 2.9277 0.3775 100.0 1753.5721 1753.8651 8225.9 1 6.623 53.8 1 K.LVSWYDNEYGYSTR.V PARC_hx4_04_itms.13380.13380.2 2.8473 0.1995 100.0 1109.3722 1109.3109 7713.2 1 5.006 88.9 1 R.VVDLVEHVAK.A YOR270C 4 5 7.1% 840 95529 5.5 U VPH1 SGDID:S000005796, Chr XV from 830571-828049, reverse complement, Verified ORF, "Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V-ATPase complexes of the vacuole while Stv1p is located in V-ATPase complexes of the Golgi and endosomes" * PARC_hx4_04_itms.19617.19617.2 3.1832 0.3207 100.0 1667.5521 1668.89 8219.2 1 6.175 53.6 1 R.DSAYTLGQLGLVQFR.D * PARC_hx4_04_itms.14757.14757.2 3.4824 0.0592 98.8 1761.4321 1761.985 7339.1 1 3.526 75.0 2 R.LIQMEDATDQIEVQK.N * PARC_hx4_04_itms.15263.15263.2 4.4708 0.5579 100.0 2068.172 2069.146 8623.5 1 9.336 52.8 1 K.IAESLDANLYDVDSSNEGR.S * PARC_hx4_04_itms.18785.18785.2 3.4902 0.3896 100.0 1396.3121 1396.4991 6348.8 1 7.354 80.0 1 K.ELDSWFQDVTR.E YBR080C 3 3 6.6% 758 84056 8.0 U SEC18 SGDID:S000000284, Chr II from 400884-398608, reverse complement, Verified ORF, "ATPase required for the release of Sec17p during the 'priming' step in homotypic vacuole fusion and for ER to Golgi transport; homolog of the mammalian NSF" * PARC_hx4_04_itms.18028.18028.2 5.081 0.4409 100.0 2344.0122 2343.5933 6889.5 1 8.226 50.0 1 R.NVQAIDLGDIEPTSAVATGIETK.G * PARC_hx4_04_itms.12902.12902.2 2.7745 0.2349 100.0 1147.4321 1147.3195 3773.8 1 5.072 77.8 1 R.SNAVIRPDFK.F * PARC_hx4_04_itms.17520.17520.2 3.0879 0.2486 100.0 1659.0322 1657.821 6671.4 1 5.137 56.2 1 R.GDGTGVGDNVVNQLLAK.M YDR471W 2 2 6.6% 136 15505 10.4 U RPL27B SGDID:S000002879, Chr IV from 1401760-1401790,1402175-1402554, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Ap and has similarity to rat L27 ribosomal protein" YHR010W 2 2 6.6% 136 15531 10.4 U RPL27A SGDID:S000001052, Chr VIII from 126515-126545,127107-127486, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Bp and has similarity to rat L27 ribosomal protein" PARC_hx4_04_itms.16406.16406.1 2.1231 0.0904 98.6 1085.35 1086.2297 9583.8 1 3.944 68.8 1 R.YTLDVEAFK.S PARC_hx4_04_itms.16392.16392.2 2.1952 0.1547 98.6 1086.0521 1086.2297 5143.0 1 4.161 81.2 1 R.YTLDVEAFK.S YAL038W 2 2 6.4% 500 54545 7.7 U CDC19 SGDID:S000000036, Chr I from 71787-73289, Verified ORF, "Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration" * PARC_hx4_03_itms.14689.14689.2 2.6269 0.1548 98.8 1761.7322 1761.9292 5632.3 1 3.729 50.0 1 K.IENQQGVNNFDEILK.V * PARC_hx4_04_itms.19233.19233.2 3.5189 0.2172 100.0 1750.8722 1750.0453 4719.4 1 5.356 50.0 1 R.GDLGIEIPAPEVLAVQK.K YLL029W 3 3 6.3% 749 84924 6.9 U YLL029W SGDID:S000003952, Chr XII from 81460-83709, Uncharacterized ORF, "Hypothetical protein" * PARC_hx4_04_itms.18004.18004.2 3.5503 0.3158 100.0 1861.2722 1861.9745 9018.4 1 5.941 57.7 1 R.QNEDPITWQEWCVR.E * PARC_hx4_04_itms.19053.19053.2 3.0287 0.3327 100.0 1704.3121 1704.79 7027.3 1 6.056 57.7 1 F.TNNPFNDDISEYFK.I * PARC_hx4_04_itms.17928.17928.2 2.5115 0.3028 100.0 2175.7322 2177.3386 7188.1 1 5.654 38.9 1 K.IYLCDSGSQFLEGTTDITR.T YBR118W 3 3 5.7% 458 50033 9.0 U TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF1; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" YPR080W 3 3 5.7% 458 50033 9.0 U TEF1 SGDID:S000006284, Chr XVI from 700592-701968, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" PARC_hx4_04_itms.15566.15566.1 2.2003 0.0284 98.7 895.35 895.04584 5649.1 40 3.49 75.0 1 K.YAWVLDK.L PARC_hx4_03_itms.12776.12776.2 2.687 0.201 100.0 976.6722 976.1607 3886.0 2 4.651 92.9 1 R.LPLQDVYK.I PARC_hx4_04_itms.13533.13533.2 3.4501 0.3164 100.0 1027.3121 1026.2241 5648.6 1 5.951 90.0 1 K.IGGIGTVPVGR.V YDR452W 3 3 5.5% 674 78344 6.9 U PPN1 SGDID:S000002860, Chr IV from 1362868-1364892, Verified ORF, "Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer" * PARC_hx4_04_itms.17580.17580.2 4.522 0.3452 100.0 1710.2522 1709.9116 7543.0 1 7.335 75.0 1 R.TEAQIFDMNNIVADK.M * PARC_hx4_04_itms.17631.17631.2 3.1621 0.3705 100.0 1249.3121 1249.4497 5139.7 4 6.408 72.7 1 R.SASFLTEVIPGK.L * PARC_hx4_04_itms.16925.16925.2 2.8957 0.1704 99.8 1260.1721 1260.432 7587.6 1 4.474 83.3 1 R.FVQFYADLEK.I contaminant_KERATIN16 3 13 5.2% 534 57265 6.6 U no description PARC_hx4_03_itms.12789.12789.1 2.4806 0.1057 95.5 827.37 827.95544 7297.1 4 3.685 75.0 1 K.FASFIDK.V PARC_hx4_04_itms.13564.13564.2 4.682 0.2398 100.0 1477.1721 1477.7007 8836.4 1 6.536 86.4 8 Q.FLEQQNKVLETK.W PARC_hx4_02_itms.09400.09400.2 3.1018 0.1596 100.0 1107.9122 1108.196 5151.7 1 6.027 93.8 4 R.AQYEEIAQR.S YML123C 2 2 4.9% 587 64382 6.4 U PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p" * PARC_hx4_04_itms.18837.18837.2 4.8325 0.4409 100.0 1935.5122 1936.1284 8456.9 1 7.977 68.8 1 R.LALESIDDEGFGWQQVK.T * PARC_hx4_04_itms.08966.08966.2 1.7088 0.1902 96.2 1086.3121 1087.1777 6719.6 1 4.346 54.5 1 R.STAHGISAASGK.V YNL268W 2 3 4.4% 611 68090 7.0 U LYP1 SGDID:S000005212, Chr XIV from 138551-140386, Verified ORF, "Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids" PARC_hx4_04_itms.15213.15213.2 2.5413 0.3405 100.0 1402.1921 1399.5461 3661.3 1 5.75 65.4 1 R.NPGAWGPGIISSDK.S * PARC_hx4_03_itms.15510.15510.2 3.9244 0.2531 100.0 1587.1122 1587.7234 7168.7 1 5.744 83.3 2 R.EIEAIIWEDDEPK.N YLR148W 3 3 4.2% 918 107398 7.0 U PEP3 SGDID:S000004138, Chr XII from 434642-437398, Verified ORF, "Vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis, forms complex with Pep5p that mediates protein transport to the vacuole" * PARC_hx4_04_itms.18722.18722.2 2.8494 0.1113 98.8 1706.5721 1706.8926 4066.2 5 3.865 57.7 1 K.FPLVLPDESEQFER.L * PARC_hx4_04_itms.16156.16156.2 3.3211 0.2363 100.0 1440.5922 1441.6392 8212.3 1 5.932 68.2 1 K.LDNETVYQIMSK.Q * PARC_hx4_04_itms.17139.17139.2 3.9406 0.2745 100.0 1474.0922 1474.6946 10133.2 1 6.225 70.8 1 R.TILNDSNEILTIK.D YMR246W 2 2 4.0% 694 77267 6.6 U FAA4 SGDID:S000004860, Chr XIII from 759806-761890, Verified ORF, "Long chain fatty acyl-CoA synthetase, regulates protein modification during growth in the presence of ethanol, functions to incorporate palmitic acid into phospholipids and neutral lipids" * PARC_hx4_04_itms.18587.18587.2 2.8168 0.2625 100.0 1368.2122 1369.5573 7581.1 1 5.119 72.7 1 K.LVDVEDLGYFAK.N * PARC_hx4_04_itms.18861.18861.2 2.7484 0.1158 98.5 1827.7922 1827.9042 8218.2 1 4.724 50.0 1 K.NPEETAAAFTDDGWFR.T YLR342W 4 5 3.9% 1876 214849 7.2 U FKS1 SGDID:S000004334, Chr XII from 809997-815627, Verified ORF, "Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling" * PARC_hx4_04_itms.18557.18557.2 3.9027 0.3375 100.0 2089.2922 2090.3154 9691.7 1 8.041 44.4 1 R.VENPEIVQMFGGNAEGLER.E * PARC_hx4_04_itms.19359.19359.2 4.995 0.4293 100.0 2645.612 2646.867 6256.7 1 8.246 52.3 2 R.AYPDLQIAYLDEEPPLTEGEEPR.I PARC_hx4_04_itms.17693.17693.2 4.7932 0.3966 100.0 1856.8922 1857.027 7051.9 1 8.894 70.6 1 R.EYIFSENSGVLGDVAAGK.E * PARC_hx4_04_itms.16860.16860.2 2.9321 0.2299 100.0 1617.6122 1617.7985 8015.9 1 5.506 58.3 1 R.EYYYLGTQLPVDR.F YDR089W 2 2 3.3% 869 98712 5.5 U YDR089W SGDID:S000002496, Chr IV from 622107-624716, Uncharacterized ORF, "Hypothetical protein" * PARC_hx4_04_itms.17849.17849.2 3.0877 0.155 99.8 1351.0721 1351.5396 7368.6 1 4.008 72.7 1 R.FLLSSEDIEGLK.F * PARC_hx4_04_itms.19576.19576.2 4.5192 0.3808 100.0 1912.7722 1913.0477 5888.0 1 6.574 68.8 1 K.LNSDDSLSPDEFFQLGK.D YOR291W 4 5 3.2% 1472 166749 6.1 U YOR291W SGDID:S000005817, Chr XV from 861172-865590, Uncharacterized ORF, "Hypothetical protein" * PARC_hx4_04_itms.17176.17176.2 3.7182 0.0656 100.0 1050.0322 1050.1998 5900.1 1 5.527 93.8 1 K.FGELLSDIR.Q * PARC_hx4_04_itms.18784.18784.2 3.6865 0.3781 100.0 1490.2522 1490.6531 6726.5 1 6.691 69.2 2 R.SVDGNLLGDPLDFK.M * PARC_hx4_04_itms.16425.16425.2 3.5928 0.3327 100.0 1490.2922 1490.5688 7816.5 1 6.272 72.7 1 K.TNNDDVYWSFTK.G * PARC_hx4_04_itms.18390.18390.2 2.7153 0.3056 100.0 1376.5721 1377.537 4657.7 1 6.794 72.7 1 K.STLPADFEEVLR.C YDL077C 2 2 3.1% 1049 122881 7.1 U VAM6 SGDID:S000002235, Chr IV from 320120-316971, reverse complement, Verified ORF, "Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by facilitating guanine nucleotide exchange on small guanosine triphosphatase Ypt7p" * PARC_hx4_04_itms.15340.15340.2 2.8156 0.2937 100.0 1618.7122 1618.7814 6791.8 12 5.43 50.0 1 K.SSDITAILPTEQSQK.L * PARC_hx4_04_itms.20404.20404.2 5.4018 0.4155 100.0 2010.7722 2010.1187 8626.2 1 7.437 68.8 1 K.FLTDLVDELENDNTDQK.Q YDR135C 3 5 3.0% 1515 171120 8.4 U YCF1 SGDID:S000002542, Chr IV from 727546-722999, reverse complement, Verified ORF, "Vacuolar glutathione S-conjugate transporter of the ATP-binding cassette family, has a role in detoxifying metals such as cadmium, mercury, and arsenite; also transports unconjugated bilirubin; similar to human cystic fibrosis protein CFTR" * PARC_hx4_04_itms.16640.16640.2 3.0966 0.3426 100.0 1686.0521 1686.8566 5539.5 1 5.942 57.1 1 R.ESSIPVEGELEQLQK.L * PARC_hx4_04_itms.18381.18381.2 5.3775 0.4545 100.0 1977.4922 1978.1252 7857.2 1 9.196 83.3 1 R.ENIDPINQYTDEAIWR.A * PARC_hx4_03_itms.14356.14356.2 4.2812 0.3822 100.0 1620.4321 1620.7563 9161.2 1 7.01 71.4 3 K.VAEFDSPGQLLSDNK.S YPL019C 2 2 2.9% 835 96553 7.4 U VTC3 SGDID:S000005940, Chr XVI from 517016-514509, reverse complement, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion" * PARC_hx4_03_itms.16702.16702.2 3.7472 0.168 100.0 1611.7322 1611.7484 8442.0 1 4.98 79.2 1 R.DFDNIQNFIVEEK.L * PARC_hx4_04_itms.14186.14186.2 2.0304 0.1505 97.0 1202.5521 1203.3378 3463.8 493 3.91 50.0 1 K.ISVPDGKTTER.Q YNR013C 2 2 2.7% 894 99490 8.0 U PHO91 SGDID:S000005296, Chr XIV from 651714-649030, reverse complement, Verified ORF, "Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth" * PARC_hx4_03_itms.14893.14893.2 3.7747 0.3417 100.0 1401.3722 1399.5431 5635.5 1 6.659 81.8 1 K.DFIELNQTGFSK.I * PARC_hx4_04_itms.12935.12935.2 3.0268 0.2972 100.0 1406.0721 1406.4978 4949.3 4 5.707 63.6 1 R.RPSNTFNLDADR.I YBR012W-B 3 4 2.5% 1756 198868 8.5 U YBR012W-B SGDID:S000002155, Chr II from 259867-261171,261173-265138, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YER160C 3 4 2.5% 1755 198568 8.5 U YER160C SGDID:S000000962, Chr V from 498119-496818,496816-492851, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YER138C 3 4 2.5% 1755 198561 8.1 U YER138C SGDID:S000000940, Chr V from 449020-447719,447717-443752, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR365W-B 3 4 2.5% 1755 198658 8.0 U YDR365W-B SGDID:S000007401, Chr IV from 1206987-1208291,1208293-1212255, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR316W-B 3 4 2.5% 1755 198526 8.2 U YDR316W-B SGDID:S000007399, Chr IV from 1096059-1097363,1097365-1101327, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR261C-D 3 4 2.7% 1604 181660 7.5 U YDR261C-D SGDID:S000007395, Chr IV from 992343-991039,991037-987528, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR210C-D 3 4 2.5% 1755 198838 8.4 U YDR210C-D SGDID:S000007410, Chr IV from 883922-882618,882616-878654, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" YDR098C-B 3 4 2.5% 1755 198594 8.4 U YDR098C-B SGDID:S000007391, Chr IV from 651121-649817,649815-645853, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" PARC_hx4_02_itms.10908.10908.2 3.8358 0.3748 100.0 1641.8522 1640.7472 5263.4 2 6.953 60.7 2 K.EVHTNQDPLDVSASK.I PARC_hx4_04_itms.18860.18860.2 3.6815 0.2365 100.0 1415.9321 1413.6257 8042.8 1 5.123 77.3 1 K.DILSVDYTDIMK.I PARC_hx4_04_itms.19106.19106.2 2.2025 0.1214 96.6 2089.4521 2090.2102 5527.9 20 4.197 37.5 1 R.LDQFNYDALTFDEDLNR.L Proteins Peptide IDs Spectra Unfiltered 10391 47557 51353 Filtered 70 373 717 Forward matches 70 373 717 Decoy matches 0 0 0 Forward FP rate 0.0 0.0 0.0 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0