DTASelect v2.0.16 /data/6/jamest/xu/aug07/hx3/parc /scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta SEQUEST 3.0 in SQT format. --trypstat true Use criteria 0.0 Minimum peptide confidence 0.05 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 16 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement false Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 1000 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence contaminant_KERATIN03 45 127 56.5% 593 59519 5.2 U no description * PARC_hx3_03_itms.10223.10223.2 4.0486 0.3791 100.0 1551.0521 1550.551 7043.4 1 6.566 52.6 1 R.SGGGGGGGGCGGGGGVSSLR.I * PARC_hx3_04_itms.16922.16922.3 3.4097 0.3162 100.0 2652.6543 2654.8557 9948.8 1 4.969 24.1 1 V.SSLRISSSKGSLGGGFSSGGFSGGSFSR.G * PARC_hx3_04_itms.16920.16920.2 5.5668 0.5187 100.0 1711.1921 1708.7844 9173.3 1 9.627 63.9 5 K.GSLGGGFSSGGFSGGSFSR.G * PARC_hx3_04_itms.15498.15498.2 3.4785 0.3297 100.0 1451.2722 1451.4949 6446.2 1 8.091 56.7 1 L.GGGFSSGGFSGGSFSR.G * PARC_hx3_03_itms.11410.11410.2 3.3458 0.2178 97.7 1133.2122 1133.1625 5474.5 1 4.907 86.4 1 F.SSGGFSGGSFSR.G * PARC_hx3_03_itms.15891.15891.2 3.7549 0.4244 100.0 2116.412 2116.2107 10640.0 1 6.712 35.4 2 F.GGGGFGGGFGGGFGGDGGLLSGNEK.V PARC_hx3_02_itms.11624.11624.2 2.8329 0.2513 100.0 1091.0322 1091.2273 7077.7 2 5.405 87.5 1 K.VTMQNLNDR.L PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V * PARC_hx3_02_itms.12392.12392.2 4.6309 0.3793 100.0 1382.5122 1382.4668 9391.6 1 7.767 81.8 4 R.ALEESNYELEGK.I * PARC_hx3_02_itms.12376.12376.1 3.2551 0.225 100.0 1382.58 1382.4668 8023.7 1 5.127 63.6 3 R.ALEESNYELEGK.I * PARC_hx3_03_itms.17983.17983.3 6.2954 0.3222 100.0 2368.1042 2368.6523 10610.2 1 6.87 47.5 8 K.NQILNLTTDNANILLQIDNAR.L * PARC_hx3_03_itms.18147.18147.2 5.9348 0.2799 100.0 2368.4321 2368.6523 9488.3 1 7.415 62.5 15 K.NQILNLTTDNANILLQIDNAR.L * PARC_hx3_02_itms.15875.15875.2 4.2873 0.3608 100.0 1672.2522 1672.8357 7477.9 3 6.746 60.7 2 L.TTDNANILLQIDNAR.L * PARC_hx3_04_itms.18030.18030.2 3.6176 0.3272 100.0 1573.6122 1571.7306 6566.8 1 6.06 69.2 1 T.TDNANILLQIDNAR.L PARC_hx3_02_itms.12040.12040.2 2.5325 0.1886 99.5 807.65216 807.8815 2388.5 1 4.578 91.7 1 R.LAADDFR.L * PARC_hx3_02_itms.11630.11630.1 2.2169 0.2132 100.0 993.32 994.0923 4398.5 1 5.344 78.6 1 K.YENEVALR.Q * PARC_hx3_02_itms.11632.11632.2 2.9602 0.2946 100.0 994.4322 994.0923 4159.3 1 6.142 92.9 1 K.YENEVALR.Q PARC_hx3_04_itms.14098.14098.2 2.8218 0.2574 95.8 1357.0521 1358.4972 7520.6 1 5.275 68.2 1 L.RQSVEADINGLR.R PARC_hx3_02_itms.13180.13180.1 1.4056 0.224 98.3 1201.61 1202.3097 1454.5 26 4.205 55.0 1 R.QSVEADINGLR.R PARC_hx3_02_itms.13168.13168.2 2.9528 0.301 100.0 1202.1721 1202.3097 3780.8 1 5.498 80.0 1 R.QSVEADINGLR.R * PARC_hx3_02_itms.14319.14319.2 3.5088 0.2721 100.0 1032.1322 1032.2224 3528.6 3 5.284 87.5 2 R.VLDELTLTK.A * PARC_hx3_03_itms.00645.00645.2 5.1548 0.5373 100.0 2096.4922 2097.3853 9147.9 1 9.976 73.5 1 K.ADLEMQIESLTEELAYLK.K * PARC_hx3_02_itms.20026.20026.2 5.9032 0.4689 100.0 2874.672 2874.2134 6590.3 1 8.07 44.2 1 R.NVSTGDVNVEMNAAPGVDLTQLLNNMR.S * PARC_hx3_04_itms.21705.21705.2 4.2287 0.3779 100.0 1613.5122 1613.8724 4451.2 1 7.012 71.4 1 N.AAPGVDLTQLLNNMR.S * PARC_hx3_02_itms.11538.11538.1 2.565 0.2691 100.0 1365.56 1366.43 3871.8 1 5.626 60.0 2 R.SQYEQLAEQNR.K * PARC_hx3_02_itms.11540.11540.2 4.4579 0.3404 100.0 1365.6721 1366.43 8441.1 1 6.852 85.0 2 R.SQYEQLAEQNR.K * PARC_hx3_03_itms.10705.10705.2 3.2428 0.2926 100.0 1493.9922 1494.6041 8643.9 3 5.11 59.1 2 R.SQYEQLAEQNRK.D * PARC_hx3_02_itms.14123.14123.1 2.5209 0.1192 98.0 1109.43 1110.1681 4989.4 1 5.284 75.0 2 K.DAEAWFNEK.S * PARC_hx3_02_itms.14116.14116.2 3.1436 0.2435 100.0 1110.2922 1110.1681 5874.1 1 6.018 81.2 2 K.DAEAWFNEK.S * PARC_hx3_02_itms.16634.16634.2 5.4871 0.4034 100.0 1997.5322 1998.151 9044.7 1 8.587 75.0 19 K.ELTTEIDNNIEQISSYK.S * PARC_hx3_02_itms.11706.11706.1 1.76 0.1594 98.2 849.55 847.94385 3757.3 5 3.463 66.7 1 K.SEITELR.R * PARC_hx3_02_itms.19054.19054.2 3.2078 0.0763 97.8 1799.8322 1798.0898 7786.0 2 3.939 50.0 2 R.NVQALEIELQSQLALK.Q * PARC_hx3_02_itms.13407.13407.2 3.917 0.4881 100.0 1390.6921 1391.4778 6530.8 1 7.941 83.3 3 K.QSLEASLAETEGR.Y * PARC_hx3_02_itms.13416.13416.1 1.6497 0.2355 97.8 1390.77 1391.4778 1555.7 38 5.313 41.7 1 K.QSLEASLAETEGR.Y * PARC_hx3_02_itms.13936.13936.2 3.746 0.2368 100.0 1338.0721 1338.4694 10722.8 2 5.165 75.0 1 R.YCVQLSQIQAQ.I * PARC_hx3_04_itms.26355.26355.3 5.3149 0.4911 100.0 2747.1843 2748.0747 4326.1 1 7.481 38.6 6 R.YCVQLSQIQAQISALEEQLQQIR.A * PARC_hx3_04_itms.22646.22646.2 3.5156 0.2613 98.3 2084.4521 2084.3372 8025.3 1 6.09 52.9 1 L.SQIQAQISALEEQLQQIR.A * PARC_hx3_04_itms.21462.21462.2 5.1298 0.3796 100.0 1996.4521 1997.259 9377.9 1 8.193 62.5 1 S.QIQAQISALEEQLQQIR.A * PARC_hx3_02_itms.15452.15452.2 4.6809 0.2691 100.0 1428.2922 1428.6285 8084.9 1 5.431 81.8 5 Q.ISALEEQLQQIR.A * PARC_hx3_02_itms.15698.15698.2 6.0417 0.4374 100.0 2083.0522 2084.2104 12020.7 1 8.125 71.9 8 R.AETECQNTEYQQLLDIK.I * PARC_hx3_02_itms.11892.11892.1 3.2541 0.2526 100.0 1165.0 1166.2761 5099.5 11 5.318 75.0 2 R.LENEIQTYR.S * PARC_hx3_02_itms.11888.11888.2 3.4519 0.2477 100.0 1166.2522 1166.2761 6457.9 2 4.35 93.8 5 R.LENEIQTYR.S * PARC_hx3_02_itms.11642.11642.1 2.336 0.1942 100.0 1262.63 1263.3066 3869.4 22 5.05 38.5 2 R.SLLEGEGSSGGGGR.G * PARC_hx3_02_itms.11631.11631.2 3.6035 0.431 100.0 1263.1122 1263.3066 7033.2 1 7.541 80.8 1 R.SLLEGEGSSGGGGR.G YBL050W 15 26 56.2% 292 32803 5.1 U SEC17 SGDID:S000000146, Chr II from 125128-125157,125274-126122, Verified ORF, "Peripheral membrane protein required for vesicular transport between ER and Golgi and for the 'priming' step in homotypic vacuole fusion, part of the cis-SNARE complex; has similarity to alpha-SNAP" * PARC_hx3_02_itms.12086.12086.1 2.3895 0.2238 100.0 1003.48 1004.08435 4477.8 1 4.795 68.8 1 K.LFSGSDSYK.F * PARC_hx3_02_itms.15809.15809.2 3.3585 0.3876 100.0 1860.3322 1858.024 4895.2 1 5.833 63.3 2 K.FEEAADLCVQAATIYR.L * PARC_hx3_02_itms.15998.15998.1 3.0055 0.2209 100.0 1206.62 1207.369 3695.3 1 4.847 70.0 1 K.ELNLAGDSFLK.A * PARC_hx3_02_itms.16005.16005.2 2.8341 0.1552 99.2 1209.2722 1207.369 5869.9 1 4.005 80.0 1 K.ELNLAGDSFLK.A * PARC_hx3_02_itms.11909.11909.2 5.0211 0.4056 100.0 1859.9722 1859.9438 5621.3 1 8.117 71.9 1 K.KAGNEDEAGNTYVEAYK.C * PARC_hx3_02_itms.12124.12124.2 4.7059 0.4797 100.0 1731.5922 1731.7698 8520.0 1 7.778 70.0 2 K.AGNEDEAGNTYVEAYK.C * PARC_hx3_02_itms.20541.20541.2 5.0733 0.4879 100.0 1935.1721 1936.0856 5404.9 1 9.458 66.7 2 K.SGGNSVNAVDSLENAIQIF.T * PARC_hx3_04_itms.20673.20673.2 3.201 0.1979 99.5 1909.6322 1907.0869 4980.8 1 5.022 50.0 2 K.FELGEILENDLHDYAK.A * PARC_hx3_02_itms.14507.14507.1 3.9926 0.4275 100.0 1672.67 1673.8169 6356.9 1 8.64 60.7 1 K.ALDGQYIEASDIYSK.L * PARC_hx3_03_itms.13793.13793.2 5.1771 0.4485 100.0 1672.8121 1673.8169 7727.3 1 7.992 78.6 5 K.ALDGQYIEASDIYSK.L * PARC_hx3_02_itms.14292.14292.2 5.1915 0.3701 100.0 1487.9922 1488.65 9851.0 1 9.001 82.1 2 K.GLCQLAATDAVAAAR.T * PARC_hx3_02_itms.11921.11921.2 5.2414 0.5 100.0 1794.5322 1794.829 4884.1 1 9.528 73.3 3 R.TLQEGQSEDPNFADSR.E * PARC_hx3_02_itms.14428.14428.2 3.7647 0.2813 100.0 1842.6522 1843.8987 5332.8 1 5.505 59.4 1 K.SLIDAVNEGDSEQLSEH.C * PARC_hx3_04_itms.16064.16064.2 5.0805 0.5388 100.0 2131.132 2132.2117 8179.9 1 9.899 66.7 1 K.SLIDAVNEGDSEQLSEHCK.E * PARC_hx3_02_itms.14631.14631.2 4.2255 0.1569 100.0 1318.2322 1318.38 6127.3 4 4.947 80.0 1 K.ESIQQQEDDLL.- YLR093C 9 12 52.2% 253 28964 5.7 U NYV1 SGDID:S000004083, Chr XII from 327416-327401,327259-326514, reverse complement, Verified ORF, "v-SNARE component of the vacuolar SNARE complex involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane" * PARC_hx3_03_itms.14988.14988.1 2.4156 0.0856 98.4 1197.51 1198.4044 8611.9 3 3.934 61.1 1 R.FNVSYVEVIK.N * PARC_hx3_03_itms.14970.14970.2 3.1536 0.2928 100.0 1197.9922 1198.4044 5661.2 1 5.391 88.9 3 R.FNVSYVEVIK.N * PARC_hx3_02_itms.15190.15190.2 3.2036 0.127 98.7 1645.2122 1643.7595 5785.1 1 3.998 61.5 2 K.NGETISSCFQPFQK.N * PARC_hx3_02_itms.18099.18099.2 3.5097 0.3059 100.0 2114.412 2112.3008 8147.1 1 6.123 55.6 1 K.NENYGTITSANEQITPVIF.H * PARC_hx3_04_itms.18316.18316.2 3.9288 0.3057 100.0 2044.7922 2046.12 4790.8 1 7.383 56.2 1 N.LIDGFDCFYSTDDHDPK.T * PARC_hx3_02_itms.17310.17310.2 4.6895 0.2812 100.0 2207.2122 2206.3708 5626.7 1 6.794 63.2 1 R.ILSGLQEYESNATNELLSSH.V * PARC_hx3_02_itms.14231.14231.3 3.938 0.2697 100.0 3367.9443 3366.407 3978.7 1 5.588 25.8 1 R.NQTLNSSGNGQSSNGNGQNTISDIGDATEDQIK.D * PARC_hx3_02_itms.15530.15530.2 4.283 0.3151 100.0 1418.3722 1418.605 7415.4 1 6.093 86.4 1 K.DVIQIMNDNIDK.F * PARC_hx3_02_itms.13000.13000.1 2.2638 0.0958 98.2 773.54 773.9481 7087.3 3 3.963 75.0 1 R.VSLLVDK.T contaminant_KERATIN02 33 57 49.0% 622 61987 5.2 U no description * PARC_hx3_03_itms.10590.10590.2 4.2234 0.4486 100.0 1232.9722 1233.2833 6961.4 1 8.6 76.7 2 T.SGGGGGGGLGSGGSIR.S * PARC_hx3_03_itms.09559.09559.2 3.0749 0.405 100.0 1235.5521 1236.2401 7349.2 1 6.785 79.2 1 R.FSSSSGYGGGSSR.V * PARC_hx3_04_itms.16602.16602.3 4.6513 0.3788 100.0 2024.0944 2024.0703 9060.3 1 6.691 40.2 1 Y.SYGGGSGGGFSASSLGGGFGGGSR.G * PARC_hx3_04_itms.16646.16646.2 5.6581 0.6195 100.0 2024.3121 2024.0703 8615.7 1 10.957 47.8 4 Y.SYGGGSGGGFSASSLGGGFGGGSR.G * PARC_hx3_04_itms.16071.16071.2 3.2512 0.3856 100.0 1773.1721 1773.816 7099.4 7 6.388 35.7 1 Y.GGGSGGGFSASSLGGGFGGGSR.G * PARC_hx3_04_itms.16221.16221.2 3.9372 0.4784 100.0 1602.7722 1602.6604 7135.6 1 7.544 61.1 1 G.SGGGFSASSLGGGFGGGSR.G * PARC_hx3_03_itms.11466.11466.2 3.4336 0.4192 100.0 1197.3722 1197.2499 6035.1 1 7.183 80.8 1 F.SASSLGGGFGGGSR.G * PARC_hx3_04_itms.13326.13326.2 2.9031 0.4479 100.0 952.03217 952.01465 3493.5 1 6.929 90.0 1 S.SLGGGFGGGSR.G * PARC_hx3_02_itms.11049.11049.2 2.6467 0.2669 100.0 1065.6322 1066.1742 5792.7 5 6.366 87.5 1 K.STMQELNSR.L PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V * PARC_hx3_02_itms.12423.12423.1 2.962 0.2457 100.0 1586.58 1587.6836 5719.5 1 6.32 53.8 1 K.VQALEEANNDLENK.I * PARC_hx3_02_itms.12407.12407.2 5.2245 0.444 100.0 1587.5721 1587.6836 11688.5 1 7.959 88.5 1 K.VQALEEANNDLENK.I * PARC_hx3_02_itms.14832.14832.2 3.5055 0.3106 100.0 1606.0521 1606.7289 5101.9 1 5.775 79.2 2 K.NYSPYYNTIDDLK.D * PARC_hx3_02_itms.14861.14861.1 2.9295 0.1912 100.0 1606.62 1606.7289 6105.2 1 4.633 58.3 1 K.NYSPYYNTIDDLK.D * PARC_hx3_02_itms.13652.13652.1 2.8962 0.3501 100.0 1315.47 1316.4539 5209.2 1 5.743 63.6 1 K.DQIVDLTVGNNK.T * PARC_hx3_02_itms.13642.13642.2 4.689 0.353 100.0 1316.4321 1316.4539 9903.2 1 6.65 86.4 2 K.DQIVDLTVGNNK.T * PARC_hx3_02_itms.13946.13946.1 2.3175 0.1737 97.6 1060.64 1061.1802 4049.7 16 5.251 62.5 1 K.TLLDIDNTR.M * PARC_hx3_02_itms.13928.13928.2 2.745 0.1269 98.7 1062.3121 1061.1802 3737.7 1 3.854 93.8 1 K.TLLDIDNTR.M * PARC_hx3_02_itms.14250.14250.2 2.0349 0.1565 97.9 898.03217 898.02155 4218.4 3 4.545 91.7 1 R.MTLDDFR.I * PARC_hx3_02_itms.12671.12671.1 1.795 0.1012 97.1 1067.52 1067.2048 3909.4 90 2.992 57.1 1 K.FEMEQNLR.Q * PARC_hx3_02_itms.12688.12688.2 2.8357 0.2773 100.0 1159.1522 1158.2566 3277.8 1 5.514 85.0 2 R.QGVDADINGLR.Q * PARC_hx3_02_itms.13692.13692.2 2.4391 0.1842 98.7 1191.0122 1191.385 3333.5 4 3.853 77.8 1 R.QVLDNLTMEK.S * PARC_hx3_04_itms.23076.23076.2 5.6815 0.4263 100.0 2171.8323 2172.4702 9920.5 1 8.843 70.6 1 K.SDLEMQYETLQEELMALK.K * PARC_hx3_02_itms.12657.12657.2 2.1913 0.1087 96.6 1122.2122 1122.2633 3165.2 2 4.465 75.0 1 R.QEYEQLIAK.N * PARC_hx3_04_itms.20806.20806.3 5.5025 0.4205 100.0 3265.6743 3266.413 8025.3 1 7.262 35.7 5 K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E * PARC_hx3_02_itms.16385.16385.2 5.1019 0.4753 100.0 1858.6122 1858.0587 10140.9 1 7.918 76.7 1 M.IQEQISNLEAQITDVR.Q * PARC_hx3_02_itms.15413.15413.2 4.5661 0.3373 100.0 1655.7722 1654.7369 4339.5 1 7.58 83.3 1 R.QEIECQNQEYSLL.L * PARC_hx3_02_itms.17300.17300.2 5.8136 0.4172 100.0 2095.4722 2096.308 9767.7 1 8.333 75.0 10 R.QEIECQNQEYSLLLSIK.M * PARC_hx3_04_itms.17548.17548.3 6.1487 0.3729 100.0 2511.4443 2511.6177 8697.9 1 7.035 42.0 3 K.EIETYHNLLEGGQEDFESSGAGK.I * PARC_hx3_04_itms.17583.17583.2 4.876 0.3703 100.0 2511.7122 2511.6177 8266.7 1 7.288 52.3 1 K.EIETYHNLLEGGQEDFESSGAGK.I * PARC_hx3_04_itms.15422.15422.2 5.3611 0.4185 100.0 1875.2722 1875.9463 9017.6 1 8.606 82.4 1 Y.HNLLEGGQEDFESSGAGK.I * PARC_hx3_03_itms.10881.10881.3 8.3508 0.585 100.0 3224.5144 3225.1118 11048.5 1 10.612 28.2 2 R.GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK.S YGL212W 14 30 44.6% 316 36711 8.4 U VAM7 SGDID:S000003180, Chr VII from 91436-92386, Verified ORF, "Component of the vacuole SNARE complex involved in vacuolar morphogenesis; SNAP-25 homolog; functions with a syntaxin homolog Vam3p in vacuolar protein trafficking" * PARC_hx3_03_itms.13214.13214.2 3.7462 0.3034 100.0 1241.3722 1241.4294 6678.8 1 6.746 90.0 1 K.YVLYGVSTPNK.R * PARC_hx3_02_itms.15040.15040.2 3.6026 0.3722 100.0 1468.0122 1468.603 4453.9 1 6.998 79.2 1 R.DVGSTIPYDFPEK.P * PARC_hx3_04_itms.18338.18338.2 4.3268 0.3356 100.0 2106.2322 2106.3398 5786.4 1 6.165 55.6 3 R.DVGSTIPYDFPEKPGVLDR.R * PARC_hx3_02_itms.12186.12186.2 2.3753 0.2191 99.0 1440.3522 1439.5396 6690.0 6 4.302 70.0 1 R.RYDDPEMIDER.R * PARC_hx3_02_itms.14393.14393.1 2.5719 0.1656 100.0 1183.61 1184.2938 3480.4 9 4.348 68.8 1 R.FLNELYNDR.F * PARC_hx3_02_itms.14384.14384.2 3.4812 0.2299 100.0 1185.3922 1184.2938 6244.3 1 4.868 93.8 3 R.FLNELYNDR.F * PARC_hx3_02_itms.15173.15173.2 3.5361 0.313 100.0 1162.6322 1163.3593 9442.3 2 6.391 83.3 4 K.IAQDFLQLSK.P * PARC_hx3_02_itms.15185.15185.1 2.7321 0.0891 98.2 1163.65 1163.3593 8028.9 9 3.486 66.7 1 K.IAQDFLQLSK.P * PARC_hx3_02_itms.11493.11493.2 2.1974 0.3037 99.6 990.0122 990.10144 2739.1 19 5.527 68.8 1 K.SLPSTEVTR.R * PARC_hx3_02_itms.11854.11854.2 2.7176 0.3034 100.0 1578.6522 1578.5989 4669.6 1 5.557 69.2 1 K.ECDDIGTANIAQDR.G * PARC_hx3_04_itms.14402.14402.2 5.6941 0.5638 100.0 1835.3922 1835.9658 9904.0 1 11.123 79.4 4 R.LLGVATSDNSSTTEVQGR.T * PARC_hx3_02_itms.12404.12404.2 4.7437 0.4624 100.0 1663.4922 1663.864 8001.9 1 8.635 73.1 1 R.TNNDLQQGQMQMVR.D * PARC_hx3_03_itms.12122.12122.2 4.3234 0.3216 100.0 1337.8722 1338.463 8222.4 1 7.025 85.0 7 R.DQEQELVALHR.I * PARC_hx3_02_itms.16746.16746.2 3.6609 0.4748 100.0 1660.8322 1661.7631 6296.4 1 8.486 75.0 1 N.ELLTALEDDVDNTGR.R contaminant_KERATIN21 14 41 38.9% 357 39219 5.2 U no description PARC_hx3_03_itms.18807.18807.2 4.5507 0.4077 100.0 1890.9122 1892.1216 5572.6 1 7.887 75.0 11 -.QNLEPLFEQYINNLR.R * PARC_hx3_02_itms.16216.16216.2 3.6456 0.3509 100.0 1182.0922 1182.3337 6647.0 1 6.923 88.9 1 R.GMQDLVEDFK.N PARC_hx3_02_itms.10350.10350.2 2.9258 0.1487 99.5 1153.4122 1153.234 5866.7 79 4.201 75.0 3 K.NKYEDEINK.R PARC_hx3_02_itms.13608.13608.2 3.2896 0.2692 100.0 1223.9321 1223.3684 5740.8 2 5.985 75.0 1 R.TAAENEFVTLK.K PARC_hx3_03_itms.16526.16526.2 3.5628 0.2608 100.0 1408.4122 1408.551 8361.9 1 5.175 77.3 5 K.ADTLTDEINFLR.A PARC_hx3_02_itms.18788.18788.1 3.3328 0.274 100.0 1329.66 1330.5211 5504.8 1 5.554 72.7 2 R.NLDLDSIIAEVK.A PARC_hx3_03_itms.17829.17829.2 4.8473 0.1856 100.0 1332.6921 1330.5211 6302.5 1 5.71 81.8 7 R.NLDLDSIIAEVK.A PARC_hx3_02_itms.11271.11271.1 1.9795 0.195 97.7 1107.64 1108.196 5163.2 3 5.035 68.8 1 K.AQYEEIAQR.S PARC_hx3_02_itms.11249.11249.2 3.1946 0.337 100.0 1108.3121 1108.196 5142.1 1 5.625 87.5 2 K.AQYEEIAQR.S PARC_hx3_02_itms.14396.14396.2 3.322 0.3485 100.0 1662.0922 1659.7625 6287.6 1 5.997 71.4 2 K.QCANLQAAIADAEQR.G PARC_hx3_02_itms.13982.13982.2 3.9036 0.3498 100.0 1116.2522 1116.2566 4347.6 1 5.915 88.9 1 K.LEGLEDALQK.A PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K PARC_hx3_02_itms.10497.10497.2 2.5921 0.1503 99.2 1006.0522 1006.0667 4357.9 2 4.792 92.9 2 K.LLEGEECR.L * PARC_hx3_03_itms.12260.12260.2 4.9362 0.4177 100.0 1448.3322 1448.6163 5314.4 1 8.47 71.9 2 R.AIGGGLSSVGGGSSTIK.Y contaminant_KERATIN12 17 19 37.6% 431 47974 5.0 U no description * PARC_hx3_03_itms.10653.10653.2 3.4063 0.4417 100.0 1034.8522 1035.1112 5634.3 1 6.768 95.0 1 R.LSGGLGAGSCR.L * PARC_hx3_02_itms.16628.16628.2 3.2212 0.3312 100.0 2661.0522 2661.764 7214.9 16 5.596 24.1 1 Y.SSCYSFGSGGGYGSSFGGVDGLLAGGEK.A * PARC_hx3_02_itms.16176.16176.2 3.8438 0.468 100.0 2164.2722 2164.2927 6806.1 1 7.557 39.1 1 Y.SFGSGGGYGSSFGGVDGLLAGGEK.A PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V PARC_hx3_02_itms.12040.12040.2 2.5325 0.1886 99.5 807.65216 807.8815 2388.5 1 4.578 91.7 1 R.LAADDFR.T PARC_hx3_02_itms.11754.11754.2 2.3757 0.1766 98.9 993.8522 994.0923 3558.3 1 4.663 85.7 1 K.FETEQALR.L PARC_hx3_02_itms.14591.14591.1 2.0106 0.0977 97.1 1029.66 1030.2096 3505.8 37 4.69 62.5 1 R.VLDELTLAR.A PARC_hx3_02_itms.14588.14588.2 3.6549 0.2643 100.0 1030.2122 1030.2096 4307.7 1 5.792 93.8 1 R.VLDELTLAR.A * PARC_hx3_02_itms.15407.15407.2 4.0173 0.2496 100.0 1304.2322 1304.5011 9319.4 3 4.91 80.0 1 R.ADLEMQIENLK.E * PARC_hx3_02_itms.15558.15558.2 3.3776 0.4135 100.0 2116.5122 2115.3228 6160.9 1 7.095 47.5 1 R.GQVGGEINVEMDAAPGVDLSR.I PARC_hx3_02_itms.11213.11213.2 4.1371 0.3674 100.0 1362.4122 1362.4796 5776.1 1 7.543 75.0 1 R.EVATNSELVQSGK.S * PARC_hx3_02_itms.12183.12183.2 4.109 0.4591 100.0 1404.3522 1404.4764 7769.2 1 8.045 79.2 1 K.ASLEGNLAETENR.Y PARC_hx3_02_itms.15365.15365.2 4.2594 0.2833 100.0 1343.6721 1343.523 8895.3 1 6.772 86.4 1 L.IGSVEEQLAQLR.C PARC_hx3_02_itms.12060.12060.1 2.634 0.1928 100.0 1122.5 1123.2511 5344.0 1 5.357 75.0 1 R.LEQEIATYR.R PARC_hx3_02_itms.12054.12054.2 3.732 0.2079 100.0 1122.6322 1123.2511 6185.9 1 5.886 93.8 1 R.LEQEIATYR.R * PARC_hx3_04_itms.14691.14691.2 4.2225 0.4275 100.0 1517.4922 1517.6787 9454.3 1 7.974 83.3 2 R.LLEGEDAHLTQYK.K contaminant_KERATIN22 31 72 36.4% 645 65865 8.0 U no description * PARC_hx3_03_itms.11054.11054.1 2.3064 0.2079 100.0 1254.57 1255.3298 3265.8 15 5.651 42.3 1 R.GFSSGSAVVSGGSR.R * PARC_hx3_03_itms.11035.11035.2 4.4593 0.4678 100.0 1255.0521 1255.3298 8958.1 1 8.643 84.6 4 R.GFSSGSAVVSGGSR.R * PARC_hx3_04_itms.14784.14784.2 4.5603 0.5449 100.0 1351.8522 1352.452 8426.3 1 10.681 78.1 1 S.VAGGGGGFGAAGGFGGR.G * PARC_hx3_04_itms.13846.13846.2 4.1411 0.4009 100.0 1126.8722 1127.1613 5478.6 1 7.797 76.9 1 F.SGGGFGGGGFGGGR.F PARC_hx3_03_itms.12410.12410.2 4.6789 0.0085 99.5 1477.3722 1476.6726 11626.3 1 6.109 90.9 3 R.FLEQQNQVLQTK.W PARC_hx3_02_itms.12970.12970.1 3.1233 0.0314 98.4 1477.57 1476.6726 5532.5 3 4.663 54.5 2 R.FLEQQNQVLQTK.W * PARC_hx3_04_itms.24622.24622.2 4.9154 0.4311 100.0 1847.5122 1848.1492 3592.5 1 7.286 73.3 12 R.PINLEPIFQGYIDSLK.R * PARC_hx3_02_itms.13106.13106.2 3.4012 0.3069 100.0 1038.0521 1038.1454 3443.9 1 6.471 93.8 1 R.YLDGLTAER.T * PARC_hx3_02_itms.16240.16240.2 5.6175 0.3774 100.0 2131.4922 2129.2598 9963.6 1 7.972 79.4 4 R.TSQNSELNNMQDLVEDYK.K * PARC_hx3_02_itms.13515.13515.1 2.3032 0.1603 97.9 1208.69 1209.3416 6881.7 2 4.304 65.0 1 R.TAAENDFVTLK.K * PARC_hx3_02_itms.13509.13509.2 3.2125 0.319 100.0 1209.6122 1209.3416 5865.8 1 6.065 80.0 1 R.TAAENDFVTLK.K * PARC_hx3_02_itms.18425.18425.1 3.2829 0.1371 100.0 1460.76 1461.6982 7139.4 3 4.373 59.1 1 K.VDLLNQEIEFLK.V * PARC_hx3_02_itms.18470.18470.2 4.611 0.0573 99.6 1462.0122 1461.6982 6994.7 1 5.68 81.8 5 K.VDLLNQEIEFLK.V PARC_hx3_02_itms.18788.18788.1 3.3328 0.274 100.0 1329.66 1330.5211 5504.8 1 5.554 72.7 2 R.NLDLDSIIAEVK.A PARC_hx3_03_itms.17829.17829.2 4.8473 0.1856 100.0 1332.6921 1330.5211 6302.5 1 5.71 81.8 7 R.NLDLDSIIAEVK.A PARC_hx3_02_itms.11271.11271.1 1.9795 0.195 97.7 1107.64 1108.196 5163.2 3 5.035 68.8 1 K.AQYEEIAQR.S PARC_hx3_02_itms.11249.11249.2 3.1946 0.337 100.0 1108.3121 1108.196 5142.1 1 5.625 87.5 2 K.AQYEEIAQR.S * PARC_hx3_03_itms.10565.10565.2 3.0734 0.0861 98.5 1393.4922 1392.5083 6006.1 7 4.204 77.3 2 R.SKEEAEALYHSK.Y * PARC_hx3_02_itms.11046.11046.2 3.0065 0.2758 100.0 1177.3322 1177.256 3534.9 1 5.393 77.8 1 K.EEAEALYHSK.Y * PARC_hx3_04_itms.14798.14798.2 3.8731 0.3394 100.0 1194.3121 1194.33 8158.8 1 6.891 94.4 4 K.YEELQVTVGR.H PARC_hx3_02_itms.12932.12932.2 3.0598 0.1587 99.6 973.7922 974.102 3474.7 7 4.317 92.9 2 K.IEISELNR.V PARC_hx3_02_itms.12880.12880.1 2.3985 0.0732 98.4 975.72 974.102 3524.0 6 3.25 71.4 1 K.IEISELNR.V * PARC_hx3_04_itms.12410.12410.2 2.7854 0.2499 100.0 994.7322 995.16675 3676.8 1 4.916 93.8 2 R.LQGEIAHVK.K * PARC_hx3_02_itms.12939.12939.1 2.7965 0.3227 100.0 1329.71 1330.3971 3401.8 1 6.209 63.6 1 K.NVQDAIADAEQR.G * PARC_hx3_02_itms.12926.12926.2 4.3586 0.3285 100.0 1329.9321 1330.3971 6930.5 1 7.451 86.4 1 K.NVQDAIADAEQR.G * PARC_hx3_02_itms.15062.15062.1 3.1443 0.3428 100.0 1371.71 1372.5181 6364.2 1 6.986 72.7 1 K.LNDLEEALQQAK.E * PARC_hx3_02_itms.15041.15041.2 5.3533 0.2595 100.0 1373.3722 1372.5181 10568.7 1 6.621 90.9 3 K.LNDLEEALQQAK.E PARC_hx3_02_itms.13863.13863.1 2.9816 0.2629 100.0 1139.48 1140.2965 6128.0 1 5.927 75.0 1 R.DYQELMNVK.L PARC_hx3_02_itms.13858.13858.2 3.1432 0.292 100.0 1140.2722 1140.2965 8311.6 2 6.005 87.5 1 R.DYQELMNVK.L PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K PARC_hx3_02_itms.10497.10497.2 2.5921 0.1503 99.2 1006.0522 1006.0667 4357.9 2 4.792 92.9 2 K.LLEGEECR.M contaminant_KERATIN13 28 71 33.3% 643 65494 6.6 U no description * PARC_hx3_02_itms.17586.17586.2 5.455 0.3836 100.0 1968.1122 1965.2542 5414.8 1 6.93 71.9 4 N.QSLLQPLNVEIDPEIQK.V * PARC_hx3_03_itms.16721.16721.2 5.0016 0.3219 100.0 1836.6921 1837.1234 5925.1 1 7.441 73.3 3 Q.SLLQPLNVEIDPEIQK.V * PARC_hx3_02_itms.16782.16782.2 3.6117 0.3052 100.0 1752.4521 1750.0453 6394.0 1 6.449 75.0 1 S.LLQPLNVEIDPEIQK.V * PARC_hx3_03_itms.15314.15314.2 4.1196 0.3246 100.0 1385.4922 1384.5315 9314.7 1 6.151 77.3 8 K.SLNNQFASFIDK.V PARC_hx3_03_itms.12410.12410.2 4.6789 0.0085 99.5 1477.3722 1476.6726 11626.3 1 6.109 90.9 3 R.FLEQQNQVLQTK.W PARC_hx3_02_itms.12970.12970.1 3.1233 0.0314 98.4 1477.57 1476.6726 5532.5 3 4.663 54.5 2 R.FLEQQNQVLQTK.W * PARC_hx3_02_itms.15932.15932.2 4.2917 0.3901 100.0 1477.7722 1476.6293 8924.5 1 6.819 86.4 3 K.WELLQQVDTSTR.T * PARC_hx3_04_itms.19190.19190.2 3.4266 0.2409 98.2 1383.7922 1384.4875 4852.6 1 5.711 65.0 5 R.THNLEPYFESF.I * PARC_hx3_02_itms.13748.13748.2 3.426 0.3521 100.0 1300.7122 1301.4316 8270.8 1 6.921 83.3 1 K.NMQDMVEDYR.N PARC_hx3_02_itms.10350.10350.2 2.9258 0.1487 99.5 1153.4122 1153.234 5866.7 79 4.201 75.0 3 R.NKYEDEINK.R * PARC_hx3_04_itms.14710.14710.2 3.985 0.0502 99.3 1422.4722 1422.5809 8240.7 2 4.353 77.3 5 K.RTNAENEFVTIK.K * PARC_hx3_02_itms.13319.13319.2 3.5664 0.3898 100.0 1265.6921 1266.3934 7593.0 1 6.659 85.0 3 R.TNAENEFVTIK.K * PARC_hx3_03_itms.01074.01074.2 2.6016 0.316 95.6 1796.7122 1797.0148 9174.5 7 5.206 42.9 1 K.LDNLQQEIDFLTALY.Q * PARC_hx3_02_itms.11061.11061.1 2.4904 0.2924 100.0 1125.58 1126.2084 5778.2 1 5.966 66.7 1 K.AEAESLYQSK.Y * PARC_hx3_02_itms.11044.11044.2 3.8514 0.3012 100.0 1126.1522 1126.2084 7186.5 1 6.737 83.3 1 K.AEAESLYQSK.Y * PARC_hx3_02_itms.13018.13018.2 3.9256 0.2116 100.0 1180.1921 1180.303 7606.3 1 6.372 94.4 4 K.YEELQITAGR.H * PARC_hx3_02_itms.13041.13041.1 2.7238 0.1598 100.0 1181.59 1180.303 5094.9 12 4.18 66.7 3 K.YEELQITAGR.H PARC_hx3_02_itms.12932.12932.2 3.0598 0.1587 99.6 973.7922 974.102 3474.7 7 4.317 92.9 2 K.IEISELNR.V PARC_hx3_02_itms.12880.12880.1 2.3985 0.0732 98.4 975.72 974.102 3524.0 6 3.25 71.4 1 K.IEISELNR.V * PARC_hx3_02_itms.13548.13548.1 1.8717 0.4061 100.0 1716.82 1717.8333 1847.8 1 7.121 50.0 1 K.QISNLQQSISDAEQR.G * PARC_hx3_02_itms.13527.13527.2 4.7428 0.4602 100.0 1718.6122 1717.8333 8311.9 1 8.301 71.4 3 K.QISNLQQSISDAEQR.G * PARC_hx3_02_itms.14600.14600.2 5.0913 0.267 100.0 1358.2922 1358.4912 9393.1 1 6.42 86.4 3 K.LNDLEDALQQAK.E * PARC_hx3_02_itms.14574.14574.1 3.265 0.27 100.0 1359.63 1358.4912 6289.7 1 5.897 68.2 3 K.LNDLEDALQQAK.E * PARC_hx3_02_itms.12816.12816.1 2.9384 0.2355 100.0 1141.49 1142.2689 4269.9 2 5.302 75.0 1 R.DYQELMNTK.L * PARC_hx3_02_itms.12813.12813.2 3.113 0.231 100.0 1141.9521 1142.2689 7261.2 2 5.843 81.2 1 R.DYQELMNTK.L * PARC_hx3_02_itms.11640.11640.1 2.4446 0.2453 100.0 1033.65 1034.1112 3738.2 1 5.423 56.2 1 R.TLLEGEESR.M * PARC_hx3_02_itms.11637.11637.2 2.4915 0.1683 98.7 1034.1522 1034.1112 5255.9 6 4.088 75.0 2 R.TLLEGEESR.M * PARC_hx3_03_itms.10511.10511.2 5.9243 0.3093 100.0 2387.872 2385.298 7540.3 1 10.927 40.0 2 R.GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR.G YOR106W 12 36 32.9% 283 32498 7.0 U VAM3 SGDID:S000005632, Chr XV from 519121-519972, Verified ORF, "Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in vacuolar protein trafficking; member of the syntaxin family of proteins" * PARC_hx3_02_itms.11024.11024.2 4.0468 0.2399 100.0 1594.2722 1593.65 7277.3 1 5.213 61.5 4 K.GNSQQEPQFSTNQK.T * PARC_hx3_02_itms.18398.18398.1 2.8973 0.1725 100.0 1636.82 1637.7869 2634.4 18 5.31 46.2 2 K.ELSNLIETFAEQSR.V * PARC_hx3_02_itms.18413.18413.3 3.8333 0.2453 100.0 1637.2144 1637.7869 5193.4 1 6.593 48.1 1 K.ELSNLIETFAEQSR.V * PARC_hx3_03_itms.17503.17503.2 5.38 0.3128 100.0 1640.5922 1637.7869 8530.3 1 7.006 76.9 14 K.ELSNLIETFAEQSR.V * PARC_hx3_02_itms.13977.13977.1 2.4039 0.1395 97.9 1531.92 1532.7002 4528.4 8 4.429 54.2 1 K.IETELIPNCTSVR.D * PARC_hx3_02_itms.13955.13955.2 4.3629 0.3703 100.0 1533.4321 1532.7002 3323.8 1 6.174 87.5 1 K.IETELIPNCTSVR.D * PARC_hx3_04_itms.14414.14414.2 3.9674 0.305 100.0 1366.8121 1366.5602 8241.9 1 6.049 86.4 3 K.IESNILIHQNGK.L * PARC_hx3_03_itms.10964.10964.2 3.5207 0.3606 100.0 1415.4122 1415.5051 6480.5 1 6.47 85.0 3 K.YQSLQQSYNQR.K * PARC_hx3_03_itms.10213.10213.2 2.3248 0.1193 97.6 888.59216 888.0086 5611.5 84 3.561 62.5 3 K.TPISPGTSK.E * PARC_hx3_02_itms.13155.13155.1 1.8031 0.157 98.4 1266.58 1267.3782 2321.2 13 3.836 55.0 1 R.QDPESSYISIK.V * PARC_hx3_02_itms.13142.13142.2 2.5615 0.2142 99.5 1267.3121 1267.3782 4768.3 1 5.041 65.0 2 R.QDPESSYISIK.V * PARC_hx3_02_itms.11339.11339.1 2.2367 0.3087 100.0 1010.43 1011.1228 3188.2 10 5.676 68.8 1 R.IHTAVQEVN.A contaminant_KERATIN17 21 43 32.7% 590 62461 8.1 U no description * PARC_hx3_03_itms.10751.10751.2 1.8435 0.1667 96.5 884.6722 884.9646 3622.3 42 3.908 71.4 1 R.TSFTSVSR.S * PARC_hx3_03_itms.10400.10400.2 2.628 0.3324 97.7 1397.6522 1396.4623 6320.1 2 5.416 53.3 1 F.TSVSRSGGGGGGGFGR.V * PARC_hx3_03_itms.12290.12290.2 4.5482 0.551 100.0 1410.7922 1411.5236 7736.4 1 9.039 82.1 2 R.VSLAGACGVGGYGSR.S * PARC_hx3_04_itms.20684.20684.2 3.801 0.3429 100.0 1936.4321 1937.2468 7473.7 1 6.683 46.9 2 N.QSLLTPLNLQIDPSIQR.V PARC_hx3_03_itms.13844.13844.2 3.4355 0.1146 99.5 1204.2922 1204.3684 8176.2 1 5.719 83.3 1 K.WTLLQEQGTK.T PARC_hx3_03_itms.18807.18807.2 4.5507 0.4077 100.0 1890.9122 1892.1216 5572.6 1 7.887 75.0 11 R.QNLEPLFEQYINNLR.R * PARC_hx3_02_itms.16229.16229.2 3.366 0.1385 99.6 1239.8922 1239.3856 6306.0 3 6.483 83.3 1 R.NMQDLVEDFK.N PARC_hx3_02_itms.10350.10350.2 2.9258 0.1487 99.5 1153.4122 1153.234 5866.7 79 4.201 75.0 3 K.NKYEDEINK.R * PARC_hx3_02_itms.17912.17912.2 3.0773 0.2918 100.0 1427.7722 1426.6858 9229.4 1 6.156 81.8 1 K.VDALMDEINFMK.M PARC_hx3_02_itms.18788.18788.1 3.3328 0.274 100.0 1329.66 1330.5211 5504.8 1 5.554 72.7 2 R.NLDLDSIIAEVK.A PARC_hx3_03_itms.17829.17829.2 4.8473 0.1856 100.0 1332.6921 1330.5211 6302.5 1 5.71 81.8 7 R.NLDLDSIIAEVK.A * PARC_hx3_02_itms.11170.11170.2 3.3001 0.329 100.0 1093.9922 1094.1692 5620.7 1 6.15 93.8 1 K.AQYEEIANR.S * PARC_hx3_04_itms.13769.13769.2 2.6916 0.2069 99.5 1485.3121 1486.5809 6205.9 5 4.573 54.5 1 R.SRTEAESWYQTK.Y * PARC_hx3_02_itms.12399.12399.1 2.2048 0.2938 100.0 1242.47 1243.3153 5038.0 1 6.12 55.6 1 R.TEAESWYQTK.Y * PARC_hx3_02_itms.13943.13943.2 3.897 0.3979 100.0 1702.2922 1702.7875 4830.0 1 7.134 75.0 1 K.QCANLQNAIADAEQR.G * PARC_hx3_02_itms.11571.11571.2 2.8892 0.239 95.7 1228.5521 1229.3353 6360.5 1 5.048 80.0 1 N.LQNAIADAEQR.G * PARC_hx3_02_itms.13984.13984.1 2.274 0.1663 97.8 1143.51 1144.3104 8453.2 11 4.235 61.1 1 K.LAELEEALQK.A * PARC_hx3_02_itms.13976.13976.2 4.0584 0.2556 100.0 1144.3322 1144.3104 8263.0 1 5.223 88.9 1 K.LAELEEALQK.A * PARC_hx3_02_itms.12212.12212.2 2.9213 0.1879 99.6 1156.3722 1156.2959 5273.3 7 4.949 75.0 1 R.EYQELMNTK.L PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K PARC_hx3_02_itms.10497.10497.2 2.5921 0.1503 99.2 1006.0522 1006.0667 4357.9 2 4.792 92.9 2 K.LLEGEECR.L YMR197C 8 20 32.3% 217 24668 6.6 U VTI1 SGDID:S000004810, Chr XIII from 659197-658544, reverse complement, Verified ORF, "Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways" * PARC_hx3_02_itms.12341.12341.1 2.5581 0.2011 100.0 1454.67 1455.6108 4431.7 2 5.073 50.0 1 K.ASLAEAPSQPLSQR.N * PARC_hx3_03_itms.11599.11599.2 4.2123 0.4929 100.0 1454.8722 1455.6108 4401.0 1 7.97 65.4 2 K.ASLAEAPSQPLSQR.N * PARC_hx3_04_itms.14622.14622.2 2.367 0.1135 97.0 1343.4122 1343.4825 4871.6 1 4.588 68.2 2 K.RPLQSLVDSGDR.D * PARC_hx3_02_itms.14765.14765.1 3.2344 0.3698 100.0 1692.85 1693.7673 3967.7 1 6.683 50.0 2 R.LFGDLNASNIDDDQR.Q * PARC_hx3_02_itms.14798.14798.2 5.5284 0.429 100.0 1692.9722 1693.7673 8879.2 1 8.449 82.1 6 R.LFGDLNASNIDDDQR.Q * PARC_hx3_02_itms.17655.17655.2 5.1344 0.4738 100.0 1879.4321 1879.1536 6872.5 1 8.466 68.8 3 R.IANETEGIGSQIMMDLR.S * PARC_hx3_02_itms.14266.14266.1 2.5643 0.2959 100.0 1414.65 1415.5425 2210.6 1 5.437 63.6 1 R.QTLFQADSYVDK.S * PARC_hx3_02_itms.14313.14313.2 4.0151 0.3 100.0 1416.4321 1415.5425 6122.0 1 6.102 90.9 3 R.QTLFQADSYVDK.S contaminant_KERATIN18 17 43 31.3% 562 59822 8.0 U no description * PARC_hx3_03_itms.12167.12167.2 3.4288 0.4143 100.0 1027.1322 1027.1222 5727.8 1 7.323 88.9 1 R.SGFSSISVSR.S * PARC_hx3_04_itms.13613.13613.2 3.2116 0.3874 100.0 1669.0521 1668.7324 8064.8 1 6.72 47.2 1 R.SRGSGGLGGACGGAGFGSR.S * PARC_hx3_04_itms.13606.13606.2 3.4881 0.3777 100.0 1426.0122 1425.4668 8185.3 4 7.091 46.9 1 R.GSGGLGGACGGAGFGSR.S * PARC_hx3_03_itms.12647.12647.2 4.4443 0.479 100.0 1600.9722 1599.7069 7072.7 1 8.694 65.6 3 R.ISIGGGSCAISGGYGSR.A PARC_hx3_03_itms.13844.13844.2 3.4355 0.1146 99.5 1204.2922 1204.3684 8176.2 1 5.719 83.3 1 K.WTLLQEQGTK.T PARC_hx3_03_itms.18807.18807.2 4.5507 0.4077 100.0 1890.9122 1892.1216 5572.6 1 7.887 75.0 11 R.QNLEPLFEQYINNLR.R PARC_hx3_02_itms.13608.13608.2 3.2896 0.2692 100.0 1223.9321 1223.3684 5740.8 2 5.985 75.0 1 R.TAAENEFVTLK.K PARC_hx3_03_itms.16526.16526.2 3.5628 0.2608 100.0 1408.4122 1408.551 8361.9 1 5.175 77.3 5 K.ADTLTDEINFLR.A PARC_hx3_02_itms.18788.18788.1 3.3328 0.274 100.0 1329.66 1330.5211 5504.8 1 5.554 72.7 2 R.NLDLDSIIAEVK.A PARC_hx3_03_itms.17829.17829.2 4.8473 0.1856 100.0 1332.6921 1330.5211 6302.5 1 5.71 81.8 7 R.NLDLDSIIAEVK.A PARC_hx3_02_itms.11271.11271.1 1.9795 0.195 97.7 1107.64 1108.196 5163.2 3 5.035 68.8 1 K.AQYEEIAQR.S PARC_hx3_02_itms.11249.11249.2 3.1946 0.337 100.0 1108.3121 1108.196 5142.1 1 5.625 87.5 2 K.AQYEEIAQR.S PARC_hx3_02_itms.14396.14396.2 3.322 0.3485 100.0 1662.0922 1659.7625 6287.6 1 5.997 71.4 2 K.QCANLQAAIADAEQR.G PARC_hx3_02_itms.13982.13982.2 3.9036 0.3498 100.0 1116.2522 1116.2566 4347.6 1 5.915 88.9 1 K.LEGLEDALQK.A PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K PARC_hx3_02_itms.10497.10497.2 2.5921 0.1503 99.2 1006.0522 1006.0667 4357.9 2 4.792 92.9 2 K.LLEGEECR.L * PARC_hx3_03_itms.11172.11172.2 4.0702 0.4196 100.0 1436.3322 1436.562 6641.0 1 7.207 71.9 1 R.ATGGGLSSVGGGSSTIK.Y contaminant_KERATIN05 18 19 27.6% 471 51531 5.2 U no description * PARC_hx3_03_itms.11342.11342.2 3.9413 0.4015 100.0 1108.6921 1107.2181 4179.7 1 7.319 95.0 1 R.ISSVLAGGSCR.A PARC_hx3_02_itms.11624.11624.2 2.8329 0.2513 100.0 1091.0322 1091.2273 7077.7 2 5.405 87.5 1 K.VTMQNLNDR.L PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V PARC_hx3_02_itms.12040.12040.2 2.5325 0.1886 99.5 807.65216 807.8815 2388.5 1 4.578 91.7 1 R.LAADDFR.T PARC_hx3_02_itms.14591.14591.1 2.0106 0.0977 97.1 1029.66 1030.2096 3505.8 37 4.69 62.5 1 R.VLDELTLAR.A PARC_hx3_02_itms.14588.14588.2 3.6549 0.2643 100.0 1030.2122 1030.2096 4307.7 1 5.792 93.8 1 R.VLDELTLAR.A * PARC_hx3_02_itms.15622.15622.2 3.4858 0.336 100.0 1276.6721 1277.4755 9031.8 1 6.509 85.0 1 R.ADLEMQIESLK.E * PARC_hx3_02_itms.16784.16784.2 3.5172 0.3277 100.0 1173.0922 1173.2671 8148.6 1 6.634 81.2 1 K.DAEEWFFTK.T * PARC_hx3_02_itms.16781.16781.1 2.527 0.1017 98.1 1173.38 1173.2671 4478.9 2 4.963 68.8 1 K.DAEEWFFTK.T PARC_hx3_02_itms.11213.11213.2 4.1371 0.3674 100.0 1362.4122 1362.4796 5776.1 1 7.543 75.0 1 R.EVATNSELVQSGK.S PARC_hx3_02_itms.12275.12275.1 2.0908 0.1627 98.1 1220.57 1221.3068 4519.2 14 4.198 55.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.12284.12284.2 3.2081 0.2446 100.0 1221.3121 1221.3068 7945.2 1 6.102 75.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.15365.15365.2 4.2594 0.2833 100.0 1343.6721 1343.523 8895.3 1 6.772 86.4 1 M.IGSVEEQLAQLR.C PARC_hx3_02_itms.12060.12060.1 2.634 0.1928 100.0 1122.5 1123.2511 5344.0 1 5.357 75.0 1 R.LEQEIATYR.R PARC_hx3_02_itms.12054.12054.2 3.732 0.2079 100.0 1122.6322 1123.2511 6185.9 1 5.886 93.8 1 R.LEQEIATYR.R * PARC_hx3_04_itms.14874.14874.2 5.3463 0.5603 100.0 2309.412 2310.396 9242.7 1 9.045 42.9 1 R.LLEGEDAHLSSSQFSSGSQSSR.D * PARC_hx3_04_itms.14852.14852.3 4.9297 0.4647 100.0 2310.0244 2310.396 6675.5 1 8.359 41.7 1 R.LLEGEDAHLSSSQFSSGSQSSR.D YLL024C 12 27 26.9% 639 69470 5.1 U SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall" * PARC_hx3_02_itms.14879.14879.2 2.7669 0.4059 100.0 1457.8722 1458.5676 3346.0 1 8.042 79.2 1 R.TTPSFVGFTDTER.L PARC_hx3_03_itms.16975.16975.2 3.0486 0.2299 99.6 1551.4922 1551.798 6028.4 1 5.552 61.5 3 K.NFTPEQISSMVLGK.M PARC_hx3_02_itms.15519.15519.2 3.6795 0.3942 100.0 1896.5322 1896.0667 4054.4 1 6.236 56.2 1 K.VNDAVVTVPAYFNDSQR.Q PARC_hx3_03_itms.15251.15251.2 5.2271 0.4618 100.0 1660.0721 1660.9078 5295.3 1 8.916 83.3 2 R.IINEPTAAAIAYGLDK.K PARC_hx3_02_itms.11898.11898.2 4.4486 0.3801 100.0 1676.3121 1676.6964 7626.0 1 8.02 76.7 1 K.ATAGDTHLGGEDFDNR.L PARC_hx3_02_itms.16780.16780.2 3.5823 0.3472 100.0 1299.8121 1300.4198 6543.7 1 6.093 88.9 2 R.FEELCADLFR.S PARC_hx3_03_itms.13908.13908.2 4.2525 0.1364 99.8 1460.4521 1460.6273 7001.6 1 7.095 80.8 3 K.SQVDEIVLVGGSTR.I PARC_hx3_02_itms.19203.19203.2 5.7638 0.5185 100.0 2581.4722 2578.7925 11258.0 1 9.465 52.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T PARC_hx3_02_itms.18322.18322.2 4.3002 0.507 100.0 2126.2922 2124.3147 6652.6 1 8.325 61.1 1 F.STYADNQPGVLIQVFEGER.A PARC_hx3_03_itms.16996.16996.2 3.9281 0.3423 100.0 1772.1522 1772.9554 7386.2 1 7.344 63.3 2 Y.ADNQPGVLIQVFEGER.A PARC_hx3_04_itms.17140.17140.2 3.4154 0.3484 100.0 1184.4922 1184.3806 4116.3 1 6.952 90.0 9 K.FELSGIPPAPR.G * PARC_hx3_04_itms.17452.17452.2 2.6107 0.1775 98.5 1751.2522 1751.8877 7546.4 30 4.489 40.0 1 K.AEETIAWLDSNTTATK.E YDR382W 2 2 26.4% 110 11050 4.1 U RPP2B SGDID:S000002790, Chr IV from 1239482-1239814, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * PARC_hx3_03_itms.14021.14021.2 5.2932 0.4058 100.0 1638.4922 1638.9047 7226.3 1 7.721 71.9 1 Y.LLLVQGGNAAPSAADIK.A * PARC_hx3_02_itms.15094.15094.2 2.6104 0.1977 99.2 1273.4722 1274.4136 8477.0 2 5.523 72.7 1 K.GSLEEIIAEGQK.K YAL005C 11 26 24.3% 642 69768 5.1 U SSA1 SGDID:S000000004, Chr I from 141433-139505, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall" * PARC_hx3_02_itms.15380.15380.2 3.3374 0.4751 100.0 1472.2322 1472.5945 3499.5 1 7.288 79.2 1 R.TTPSFVAFTDTER.L PARC_hx3_03_itms.16975.16975.2 3.0486 0.2299 99.6 1551.4922 1551.798 6028.4 1 5.552 61.5 3 K.NFTPEQISSMVLGK.M PARC_hx3_02_itms.15519.15519.2 3.6795 0.3942 100.0 1896.5322 1896.0667 4054.4 1 6.236 56.2 1 K.VNDAVVTVPAYFNDSQR.Q PARC_hx3_03_itms.15251.15251.2 5.2271 0.4618 100.0 1660.0721 1660.9078 5295.3 1 8.916 83.3 2 R.IINEPTAAAIAYGLDK.K PARC_hx3_02_itms.11898.11898.2 4.4486 0.3801 100.0 1676.3121 1676.6964 7626.0 1 8.02 76.7 1 K.ATAGDTHLGGEDFDNR.L PARC_hx3_02_itms.16780.16780.2 3.5823 0.3472 100.0 1299.8121 1300.4198 6543.7 1 6.093 88.9 2 R.FEELCADLFR.S PARC_hx3_03_itms.13908.13908.2 4.2525 0.1364 99.8 1460.4521 1460.6273 7001.6 1 7.095 80.8 3 K.SQVDEIVLVGGSTR.I PARC_hx3_02_itms.19203.19203.2 5.7638 0.5185 100.0 2581.4722 2578.7925 11258.0 1 9.465 52.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T PARC_hx3_02_itms.18322.18322.2 4.3002 0.507 100.0 2126.2922 2124.3147 6652.6 1 8.325 61.1 1 F.STYADNQPGVLIQVFEGER.A PARC_hx3_03_itms.16996.16996.2 3.9281 0.3423 100.0 1772.1522 1772.9554 7386.2 1 7.344 63.3 2 Y.ADNQPGVLIQVFEGER.A PARC_hx3_04_itms.17140.17140.2 3.4154 0.3484 100.0 1184.4922 1184.3806 4116.3 1 6.952 90.0 9 K.FELSGIPPAPR.G YDR418W 2 2 23.0% 165 17823 9.4 U RPL12B SGDID:S000002826, Chr IV from 1301606-1302103, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins" YEL054C 2 2 23.0% 165 17823 9.4 U RPL12A SGDID:S000000780, Chr V from 53218-52721, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Bp; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins" PARC_hx3_04_itms.20447.20447.2 3.7566 0.3852 100.0 1813.0322 1814.1326 4182.7 1 6.529 58.3 1 R.QAAASVVPSASSLVITALK.E PARC_hx3_04_itms.19259.19259.2 2.921 0.1979 99.3 2075.4521 2075.2395 5466.4 2 4.304 47.2 1 K.NPHDIIEGINAGEIEIPEN.- YLR447C 4 6 21.4% 345 39791 4.6 U VMA6 SGDID:S000004439, Chr XII from 1027889-1026852, reverse complement, Verified ORF, "Subunit D of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found in the endomembrane system; stabilizes VO subunits; required for V1 domain assembly on the vacuolar membrane" * PARC_hx3_04_itms.20435.20435.3 4.0705 0.1585 96.7 2567.6943 2567.7786 10747.2 2 4.199 26.2 1 R.NGLLSNNQYINLTQCDTLEDLK.L * PARC_hx3_02_itms.22037.22037.2 4.608 0.4669 100.0 2274.9922 2276.5042 7684.2 1 8.226 58.3 1 K.AYLEDFYNFVTEEIPEPAK.E * PARC_hx3_02_itms.16959.16959.2 4.2804 0.4482 100.0 2043.4321 2044.2665 6919.9 1 8.253 66.7 3 R.SINIALNSLQSSDIDPDLK.S * PARC_hx3_04_itms.19398.19398.2 5.1316 0.374 100.0 1717.3322 1717.8883 9370.2 1 7.065 80.8 1 R.NITWIAECIAQNQR.E contaminant_KERATIN08 14 16 21.3% 469 50499 5.0 U no description PARC_hx3_02_itms.11624.11624.2 2.8329 0.2513 100.0 1091.0322 1091.2273 7077.7 2 5.405 87.5 1 K.VTMQNLNDR.L PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V PARC_hx3_02_itms.12040.12040.2 2.5325 0.1886 99.5 807.65216 807.8815 2388.5 1 4.578 91.7 1 R.LAADDFR.T PARC_hx3_02_itms.14591.14591.1 2.0106 0.0977 97.1 1029.66 1030.2096 3505.8 37 4.69 62.5 1 R.VLDELTLAR.T PARC_hx3_02_itms.14588.14588.2 3.6549 0.2643 100.0 1030.2122 1030.2096 4307.7 1 5.792 93.8 1 R.VLDELTLAR.T PARC_hx3_04_itms.15004.15004.2 2.948 0.0144 97.1 1241.6522 1242.3923 5159.3 1 5.849 72.2 2 K.NHEEEMLALR.G * PARC_hx3_02_itms.16138.16138.1 2.1683 0.3151 100.0 1096.46 1097.2126 5765.6 2 6.091 68.8 1 R.DAETWFLSK.T PARC_hx3_02_itms.12275.12275.1 2.0908 0.1627 98.1 1220.57 1221.3068 4519.2 14 4.198 55.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.12284.12284.2 3.2081 0.2446 100.0 1221.3121 1221.3068 7945.2 1 6.102 75.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.15365.15365.2 4.2594 0.2833 100.0 1343.6721 1343.523 8895.3 1 6.772 86.4 1 L.IGSVEEQLAQLR.C * PARC_hx3_02_itms.16569.16569.2 3.7985 0.316 100.0 2144.0923 2142.3516 7904.2 1 5.264 59.4 1 R.CEMEQQSQEYQILLDVK.T PARC_hx3_02_itms.12060.12060.1 2.634 0.1928 100.0 1122.5 1123.2511 5344.0 1 5.357 75.0 1 R.LEQEIATYR.R PARC_hx3_02_itms.12054.12054.2 3.732 0.2079 100.0 1122.6322 1123.2511 6185.9 1 5.886 93.8 1 R.LEQEIATYR.R contaminant_gi|7463016|pir||S77957 25 65 20.1% 269 27961 6.7 U lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes * PARC_hx3_03_itms.12514.12514.2 3.7839 0.3227 100.0 1491.2922 1491.5688 6869.0 1 6.861 85.0 3 V.VYWNYQNSTCR.A * PARC_hx3_04_itms.12932.12932.2 3.4277 0.4163 100.0 1228.9122 1229.2604 6283.1 1 6.365 100.0 4 Y.WNYQNSTCR.A * PARC_hx3_04_itms.21056.21056.2 3.4789 0.3126 100.0 1165.4321 1165.2963 5076.0 1 5.694 93.8 9 Y.NLFWAGWDR.R * PARC_hx3_04_itms.20229.20229.2 3.3005 0.2823 100.0 1051.1122 1051.1924 3523.8 3 5.207 92.9 11 N.LFWAGWDR.R * PARC_hx3_04_itms.17552.17552.2 2.6036 0.2314 96.2 938.0122 938.03296 2367.2 2 4.184 100.0 1 L.FWAGWDR.R * PARC_hx3_02_itms.12494.12494.2 4.7116 0.4513 100.0 1749.4321 1749.8718 3999.2 1 8.492 67.6 2 S.GGVTEPGSSGSPIYSPEK.R * PARC_hx3_02_itms.12462.12462.1 3.7191 0.3579 100.0 1750.8 1749.8718 5364.6 1 6.636 50.0 2 S.GGVTEPGSSGSPIYSPEK.R * PARC_hx3_02_itms.12453.12453.2 3.5812 0.3126 100.0 1692.2522 1692.82 5565.0 1 5.99 62.5 1 G.GVTEPGSSGSPIYSPEK.R * PARC_hx3_02_itms.12246.12246.2 3.8966 0.4425 100.0 1635.5721 1635.768 5014.5 1 7.283 66.7 2 G.VTEPGSSGSPIYSPEK.R * PARC_hx3_02_itms.12981.12981.1 2.5271 0.319 100.0 1305.46 1306.4149 4967.2 1 6.153 62.5 1 E.PGSSGSPIYSPEK.R * PARC_hx3_02_itms.11621.11621.2 2.8875 0.2339 95.9 1152.4922 1152.2462 5296.0 4 5.497 65.0 1 G.SSGSPIYSPEK.R * PARC_hx3_02_itms.11625.11625.1 2.5631 0.3302 100.0 1064.54 1065.1681 5326.5 1 5.475 61.1 1 S.SGSPIYSPEK.R * PARC_hx3_02_itms.11654.11654.2 2.5116 0.4009 100.0 1064.6322 1065.1681 4203.5 1 6.416 77.8 1 S.SGSPIYSPEK.R * PARC_hx3_04_itms.13572.13572.2 2.5347 0.2632 95.8 878.15216 878.0189 3032.8 3 5.087 75.0 1 R.VLGQLHGGP.S * PARC_hx3_04_itms.13388.13388.2 2.7386 0.2689 96.9 964.8522 965.0971 3041.9 1 6.658 83.3 1 R.VLGQLHGGPS.S * PARC_hx3_04_itms.13376.13376.2 3.3611 0.3358 100.0 1052.1122 1052.1753 4898.8 1 6.393 85.0 4 R.VLGQLHGGPSS.C * PARC_hx3_04_itms.13311.13311.1 2.4953 0.3887 100.0 1052.63 1052.1753 6012.4 1 6.37 65.0 1 R.VLGQLHGGPSS.C * PARC_hx3_04_itms.13442.13442.1 3.2542 0.4635 100.0 1211.65 1212.3141 6028.1 1 7.636 59.1 3 R.VLGQLHGGPSSC.S * PARC_hx3_04_itms.13430.13430.2 4.0328 0.4595 100.0 1212.7522 1212.3141 7136.4 1 8.297 95.5 10 R.VLGQLHGGPSSC.S * PARC_hx3_04_itms.13355.13355.2 3.0454 0.3313 100.0 1299.1921 1299.3923 8123.6 1 6.829 66.7 1 R.VLGQLHGGPSSCS.A * PARC_hx3_04_itms.13450.13450.2 3.644 0.3289 100.0 1370.1122 1370.4711 8114.2 1 7.122 76.9 1 R.VLGQLHGGPSSCSA.T * PARC_hx3_04_itms.13454.13454.2 3.284 0.4598 100.0 1471.3322 1471.5762 5392.2 1 8.376 64.3 1 R.VLGQLHGGPSSCSAT.G * PARC_hx3_04_itms.13508.13508.2 3.4317 0.2106 95.9 1529.1122 1528.628 7538.1 1 6.37 63.3 1 R.VLGQLHGGPSSCSATG.A * PARC_hx3_04_itms.13402.13402.1 2.6164 0.3838 100.0 1113.51 1113.1815 6030.9 1 6.271 65.0 1 V.LGQLHGGPSSC.S * PARC_hx3_04_itms.13395.13395.1 2.3143 0.4213 100.0 999.35 1000.0221 5567.8 1 7.061 61.1 1 L.GQLHGGPSSC.S YDR481C 7 8 17.0% 566 63004 5.6 U PHO8 SGDID:S000002889, Chr IV from 1420240-1418540, reverse complement, Verified ORF, "Repressible alkaline phosphatase, a glycoprotein localized to the vacuole; regulated by levels of inorganic phosphate and by a system consisting of Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides" * PARC_hx3_03_itms.16384.16384.2 4.1286 0.3567 100.0 2043.7122 2044.189 8774.8 1 7.11 50.0 1 R.SSDSLVTDSAAGATAFACALK.S * PARC_hx3_03_itms.12587.12587.2 3.1836 0.2218 98.3 960.1322 960.16187 5777.4 1 5.631 87.5 1 Y.LTGLVVTTR.I * PARC_hx3_04_itms.14960.14960.2 2.6925 0.0895 97.0 1766.8322 1767.8926 7424.4 1 4.033 53.3 1 R.ITDATPASFSSHVDYR.W * PARC_hx3_03_itms.14174.14174.2 3.4288 0.4177 100.0 1018.21216 1017.2316 5932.6 1 6.858 94.4 1 R.VVDLLMGGGR.S * PARC_hx3_02_itms.16263.16263.2 4.2458 0.4228 100.0 1966.2522 1967.0587 5701.9 1 8.192 59.4 1 R.DLIDEAQSNGWQYVGDR.K * PARC_hx3_03_itms.11859.11859.1 1.9948 0.075 97.2 800.39 800.97375 7941.7 11 3.927 64.3 1 K.VALGALEK.A * PARC_hx3_04_itms.11828.11828.2 4.3603 0.467 100.0 1646.2322 1645.7317 5117.5 1 8.39 71.4 2 R.IDHAGHQNDPASQVR.E contaminant_KERATIN07 11 17 15.2% 473 50915 5.5 U no description PARC_hx3_02_itms.11920.11920.2 2.2138 0.1811 98.7 809.6922 809.93774 2227.9 5 4.194 83.3 1 R.LASYLDK.V PARC_hx3_02_itms.11912.11912.1 2.2716 0.0967 98.1 810.55 809.93774 8580.4 51 4.288 75.0 2 R.LASYLDK.V * PARC_hx3_02_itms.16692.16692.2 5.6473 0.4179 100.0 2065.9521 2065.3774 7890.0 1 7.441 61.1 5 K.IIAATIENAQPILQIDNAR.L PARC_hx3_02_itms.12040.12040.2 2.5325 0.1886 99.5 807.65216 807.8815 2388.5 1 4.578 91.7 1 R.LAADDFR.T PARC_hx3_02_itms.14591.14591.1 2.0106 0.0977 97.1 1029.66 1030.2096 3505.8 37 4.69 62.5 1 R.VLDELTLAR.T PARC_hx3_02_itms.14588.14588.2 3.6549 0.2643 100.0 1030.2122 1030.2096 4307.7 1 5.792 93.8 1 R.VLDELTLAR.T PARC_hx3_04_itms.15004.15004.2 2.948 0.0144 97.1 1241.6522 1242.3923 5159.3 1 5.849 72.2 2 K.NHEEEMLALR.G PARC_hx3_02_itms.12275.12275.1 2.0908 0.1627 98.1 1220.57 1221.3068 4519.2 14 4.198 55.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.12284.12284.2 3.2081 0.2446 100.0 1221.3121 1221.3068 7945.2 1 6.102 75.0 1 K.ASLENSLEETK.G PARC_hx3_02_itms.12060.12060.1 2.634 0.1928 100.0 1122.5 1123.2511 5344.0 1 5.357 75.0 1 R.LEQEIATYR.R PARC_hx3_02_itms.12054.12054.2 3.732 0.2079 100.0 1122.6322 1123.2511 6185.9 1 5.886 93.8 1 R.LEQEIATYR.R YBR080C 6 7 13.6% 758 84056 8.0 U SEC18 SGDID:S000000284, Chr II from 400884-398608, reverse complement, Verified ORF, "ATPase required for the release of Sec17p during the 'priming' step in homotypic vacuole fusion and for ER to Golgi transport; homolog of the mammalian NSF" * PARC_hx3_03_itms.14877.14877.2 3.5702 0.2887 100.0 1590.4321 1590.7355 8859.4 1 6.209 69.2 1 R.TWGGWSLNQDVQAK.A * PARC_hx3_02_itms.16846.16846.2 5.3024 0.556 100.0 2343.4722 2343.5933 5484.2 1 8.718 54.5 1 R.NVQAIDLGDIEPTSAVATGIETK.G * PARC_hx3_02_itms.16336.16336.2 2.8464 0.2093 99.5 1657.0922 1657.821 5860.0 4 4.637 50.0 1 R.GDGTGVGDNVVNQLLAK.M * PARC_hx3_02_itms.19115.19115.2 2.1169 0.1794 96.9 2007.1721 2004.327 6636.0 2 3.676 35.3 1 K.MDGVDQLNNILVIGMTNR.K * PARC_hx3_03_itms.15239.15239.2 3.1688 0.2092 100.0 1106.1921 1106.3073 3479.4 1 5.07 87.5 1 R.LQIFDIQTK.K * PARC_hx3_04_itms.23265.23265.2 3.9213 0.4317 100.0 2437.9922 2438.6501 7091.8 1 8.091 52.4 2 R.EDFLNALNDVTPAFGISEEDLK.T YJL034W 7 17 13.3% 682 74468 4.9 U KAR2 SGDID:S000003571, Chr X from 381243-383291, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p" contaminant_GR78_YEAST 7 17 13.3% 682 74468 4.9 U owl|P16474| 78 KD GLUCOSE REGULATED PROTEIN HOMOLOG PRECURSOR (GRP 78) (IMMUNOGLOBULIN... PARC_hx3_02_itms.14381.14381.2 3.7283 0.4882 100.0 1514.5922 1514.6317 3991.9 1 8.088 75.0 1 R.ITPSYVAFTDDER.L PARC_hx3_02_itms.15326.15326.2 4.7973 0.2661 100.0 1673.4521 1673.8662 7156.3 1 6.814 82.1 4 K.NQVAANPQNTIFDIK.R PARC_hx3_04_itms.22242.22242.2 3.187 0.2763 100.0 1520.6122 1521.812 5734.7 1 6.799 69.2 2 K.VFTPEEISGMILGK.M PARC_hx3_02_itms.15584.15584.2 5.146 0.4852 100.0 1647.2922 1646.881 5523.8 1 9.121 83.3 1 R.IVNEPTAAAIAYGLDK.S PARC_hx3_03_itms.17512.17512.2 3.2757 0.1792 99.8 1268.0922 1268.4521 4720.3 3 4.125 77.8 1 K.FEELNLDLFK.K PARC_hx3_02_itms.16170.16170.2 3.6861 0.2595 100.0 1427.2322 1427.5969 8532.9 1 5.189 72.7 1 K.VQQLLESYFDGK.K PARC_hx3_04_itms.17414.17414.2 3.0053 0.3148 100.0 1197.9922 1198.4075 3395.1 1 5.818 85.0 7 K.FELTGIPPAPR.G YBR221C 3 4 12.3% 366 40054 5.3 U PDB1 SGDID:S000000425, Chr II from 666248-665148, reverse complement, Verified ORF, "E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved multi-protein complex found in mitochondria" * PARC_hx3_04_itms.20856.20856.2 3.1129 0.1213 98.6 2149.0122 2147.3025 10524.7 1 4.296 50.0 1 R.DDDVFLIGEEVAQYNGAYK.V * PARC_hx3_03_itms.14153.14153.2 3.125 0.2851 100.0 1221.3722 1221.3989 7854.2 1 5.954 80.0 2 K.YGVSAEVINLR.S * PARC_hx3_02_itms.17500.17500.2 3.8388 0.2647 100.0 1724.4722 1722.9324 7256.2 1 6.607 60.7 1 K.ELEDFAFPDTPTIVK.A YKL196C 2 2 12.0% 200 22707 5.7 U YKT6 SGDID:S000001679, Chr XI from 75539-74937, reverse complement, Verified ORF, "Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus" * PARC_hx3_02_itms.17822.17822.2 3.0734 0.1423 99.5 1245.6322 1246.3647 6305.3 1 5.251 77.8 1 K.DLSQFGFFER.S * PARC_hx3_02_itms.14202.14202.2 3.1207 0.4113 100.0 1620.9521 1621.6978 6571.8 1 6.533 65.4 1 K.EEWADVTETNDALK.M YLR058C 4 8 11.7% 469 52219 7.4 U SHM2 SGDID:S000004048, Chr XII from 259402-257993, reverse complement, Verified ORF, "Cytosolic serine hydroxymethyltransferase, involved in one-carbon metabolism" * PARC_hx3_04_itms.20237.20237.2 4.2875 0.436 100.0 1670.2922 1667.8584 8946.9 1 8.635 73.1 4 K.ISAVSTYFESFPYR.V * PARC_hx3_02_itms.15288.15288.2 4.6299 0.4966 100.0 1708.3722 1707.8749 3621.0 1 8.546 82.1 1 R.VNPETGIIDYDTLEK.N * PARC_hx3_03_itms.14227.14227.2 4.4052 0.2783 100.0 1573.4321 1573.7893 8042.9 2 5.502 65.4 2 K.AVEFAQQVQQSLPK.D * PARC_hx3_02_itms.14426.14426.2 4.0083 0.463 100.0 1363.1322 1363.4668 7273.5 1 8.015 86.4 1 K.VDEGSDVLNTWK.K YDR229W 3 8 11.7% 453 49976 5.0 U IVY1 SGDID:S000002637, Chr IV from 924779-926140, Verified ORF, "Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase" * PARC_hx3_03_itms.16574.16574.2 5.9558 0.4562 100.0 2051.8323 2052.2866 6937.0 1 9.301 68.4 4 R.ASSITSGTSTINDLQTLITK.R * PARC_hx3_02_itms.15290.15290.2 3.2635 0.3405 100.0 1263.4722 1261.4178 7109.5 1 5.428 75.0 1 K.ETQEALSTLLR.N * PARC_hx3_03_itms.00787.00787.2 4.4272 0.3146 100.0 2633.2522 2631.8523 10324.3 1 5.948 52.4 3 K.YFNDLLGDNLIDDIDEFELQTK.I YGR192C 3 5 11.7% 332 35747 7.0 U TDH3 SGDID:S000003424, Chr VII from 883815-882817, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " YJR009C 3 5 11.7% 332 35847 7.0 U TDH2 SGDID:S000003769, Chr X from 454595-453597, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall " PARC_hx3_03_itms.11314.11314.2 3.1687 0.1682 99.3 1374.7522 1375.5217 4064.0 9 4.419 57.1 1 R.TASGNIIPSSTGAAK.A PARC_hx3_02_itms.16676.16676.2 3.5158 0.439 100.0 1470.7322 1471.7344 8429.6 1 8.451 73.1 3 R.VPTVDVSVVDLTVK.L PARC_hx3_04_itms.14717.14717.2 2.9859 0.2917 100.0 1109.2522 1109.3109 5440.7 1 5.491 88.9 1 R.VVDLVEHVAK.A YOR270C 7 11 11.5% 840 95529 5.5 U VPH1 SGDID:S000005796, Chr XV from 830571-828049, reverse complement, Verified ORF, "Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V-ATPase complexes of the vacuole while Stv1p is located in V-ATPase complexes of the Golgi and endosomes" * PARC_hx3_03_itms.17093.17093.2 4.3085 0.3884 100.0 1669.6122 1668.89 8565.6 1 7.565 75.0 2 R.DSAYTLGQLGLVQFR.D * PARC_hx3_02_itms.17508.17508.2 3.2952 0.2218 99.6 2401.4922 2402.6196 3474.4 1 5.003 33.3 1 K.YLDGSGELYVPPSGSVIDDYVR.N * PARC_hx3_04_itms.20980.20980.2 3.417 0.285 100.0 1229.2522 1229.4648 6765.0 1 5.802 83.3 2 K.VATLEQILWR.V * PARC_hx3_02_itms.14679.14679.2 6.1734 0.5774 100.0 2068.3523 2069.146 8240.6 1 10.596 69.4 3 K.IAESLDANLYDVDSSNEGR.S * PARC_hx3_03_itms.16157.16157.2 3.1466 0.1006 99.2 1166.2722 1166.3599 4012.3 1 4.89 88.9 1 K.NLSDLYTVLK.T * PARC_hx3_02_itms.17258.17258.2 2.7149 0.0807 97.6 1396.4521 1396.4991 7453.7 1 3.317 70.0 1 K.ELDSWFQDVTR.E * PARC_hx3_04_itms.20056.20056.2 3.4345 0.3243 100.0 1167.9122 1168.4246 6303.9 1 6.6 94.4 1 K.ILIAEGWIPR.D YNL058C 2 3 11.4% 316 35046 7.2 U YNL058C SGDID:S000005003, Chr XIV from 516714-515764, reverse complement, Uncharacterized ORF, "Protein of unknown function, localizes to the vacuole; potential Cdc28p substrate" * PARC_hx3_04_itms.19268.19268.2 4.6636 0.362 100.0 1741.5122 1740.994 6563.5 1 7.208 71.4 2 R.SLFISPTLQVSQYEK.S * PARC_hx3_03_itms.14203.14203.2 5.1681 0.4755 100.0 2059.4521 2060.2688 4079.8 1 7.894 67.5 1 R.NQSSLGLIPVASATSNTSSPK.K YGL076C 2 2 11.1% 244 27638 10.1 U RPL7A SGDID:S000003044, Chr VII from 365999-365989,365529-365436,364967-364338, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" YPL198W 2 2 11.1% 244 27696 10.1 U RPL7B SGDID:S000006119, Chr XVI from 173151-173161,173571-173664,174072-174701, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)" PARC_hx3_04_itms.17472.17472.2 2.9546 0.254 99.6 1554.1921 1554.7838 6756.6 1 5.336 57.1 1 R.VPLSDNAIIEANLGK.Y PARC_hx3_04_itms.15108.15108.2 2.7977 0.2793 100.0 1227.2122 1227.3652 6875.4 6 5.372 63.6 1 K.LSNPSGGWGVPR.K YAL038W 3 3 10.6% 500 54545 7.7 U CDC19 SGDID:S000000036, Chr I from 71787-73289, Verified ORF, "Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration" * PARC_hx3_02_itms.13973.13973.2 3.0385 0.2875 100.0 1228.6122 1228.391 6380.7 1 5.064 80.0 1 K.TNNPETLVALR.K * PARC_hx3_02_itms.17813.17813.2 3.7348 0.3099 100.0 1752.6522 1750.0453 4933.0 1 5.613 50.0 1 R.GDLGIEIPAPEVLAVQK.K * PARC_hx3_02_itms.18815.18815.2 2.465 0.1005 95.8 2526.2322 2523.7378 4622.6 5 3.314 29.2 1 R.AEVSDVGNAILDGADCVMLSGETAK.G YDR119W 5 6 10.4% 768 85683 8.3 U YDR119W SGDID:S000002526, Chr IV from 688222-690528, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_02_itms.11388.11388.2 2.5337 0.0695 96.3 1161.4922 1161.2572 2920.7 2 4.58 70.0 1 R.TSNQIALGNDK.I * PARC_hx3_02_itms.14274.14274.2 4.893 0.348 100.0 1741.4521 1741.9359 10223.4 1 7.959 73.3 1 K.IEEINENSPLLSAPSK.Q * PARC_hx3_04_itms.15987.15987.2 4.4231 0.3593 100.0 1821.4922 1820.0093 7777.5 1 6.64 62.5 1 K.AVDIDTIDAQPLHEGPK.I * PARC_hx3_03_itms.15643.15643.2 4.4936 0.439 100.0 2199.152 2198.4346 6692.9 1 8.794 52.5 2 K.SLHIVAPSPEVPVSGDEITSY.G * PARC_hx3_04_itms.13509.13509.2 5.0208 0.5551 100.0 1681.4321 1681.7588 9397.8 1 9.979 71.4 1 K.HATESSDWVHESAPK.F YML123C 4 12 10.1% 587 64382 6.4 U PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p" * PARC_hx3_03_itms.16500.16500.2 5.2197 0.3744 100.0 1935.3322 1936.1284 8910.6 1 7.115 68.8 4 R.LALESIDDEGFGWQQVK.T * PARC_hx3_02_itms.12322.12322.2 4.6432 0.4851 100.0 1473.5922 1473.5798 7948.5 1 8.362 88.5 3 K.LELAAAAQEQDGEK.K * PARC_hx3_04_itms.10522.10522.2 2.7882 0.3681 100.0 1087.1921 1087.1777 5862.4 2 6.322 72.7 4 R.STAHGISAASGK.V * PARC_hx3_02_itms.11968.11968.2 5.0511 0.407 100.0 1756.1921 1756.7802 7118.0 1 7.728 73.3 1 K.NNDIESSSPSQLQHEA.- YNL071W 3 4 9.8% 482 51818 7.8 U LAT1 SGDID:S000005015, Chr XIV from 491524-492972, Verified ORF, "Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA" * PARC_hx3_04_itms.16762.16762.2 2.3569 0.1904 98.1 1700.2922 1700.9725 5494.1 81 3.888 46.4 1 K.DIPVNKPIAVYVEDK.A * PARC_hx3_04_itms.17331.17331.2 4.4995 0.4854 100.0 1723.9722 1721.9915 5553.5 1 7.958 66.7 2 R.LLQSTQGIPSYIVSSK.I * PARC_hx3_02_itms.16552.16552.2 3.1138 0.3232 100.0 1870.0322 1872.0905 7365.4 1 5.865 43.3 1 R.VPDANAYWLPNENVIR.K contaminant_KERATIN04 6 6 9.6% 458 49644 4.9 U no description * PARC_hx3_04_itms.14626.14626.2 3.2141 0.2285 99.6 2148.5122 2148.2195 7528.0 19 5.167 34.1 1 R.LQSSSASYGGGFGGGSCQLGGGR.G PARC_hx3_04_itms.14098.14098.2 2.8218 0.2574 95.8 1357.0521 1358.4972 7520.6 1 5.275 68.2 1 L.RQSVEADINGLR.R PARC_hx3_02_itms.13180.13180.1 1.4056 0.224 98.3 1201.61 1202.3097 1454.5 26 4.205 55.0 1 R.QSVEADINGLR.R PARC_hx3_02_itms.13168.13168.2 2.9528 0.301 100.0 1202.1721 1202.3097 3780.8 1 5.498 80.0 1 R.QSVEADINGLR.R PARC_hx3_02_itms.12060.12060.1 2.634 0.1928 100.0 1122.5 1123.2511 5344.0 1 5.357 75.0 1 R.LEQEIATYR.S PARC_hx3_02_itms.12054.12054.2 3.732 0.2079 100.0 1122.6322 1123.2511 6185.9 1 5.886 93.8 1 R.LEQEIATYR.S YBR031W 2 2 9.4% 362 39092 10.6 U RPL4A SGDID:S000000235, Chr II from 300166-301254, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins" YDR012W 2 2 9.4% 362 39062 10.6 U RPL4B SGDID:S000002419, Chr IV from 471850-472938, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins" PARC_hx3_02_itms.19533.19533.2 2.8909 0.3374 100.0 1674.2322 1672.9188 5669.2 2 6.222 46.9 1 H.SLTGEATANALPLPAVF.S PARC_hx3_02_itms.19302.19302.2 2.7494 0.1268 97.9 1884.0322 1882.2047 6596.1 1 4.068 50.0 1 K.IPEIPLVVSTDLESIQK.T YDR089W 5 10 9.3% 869 98712 5.5 U YDR089W SGDID:S000002496, Chr IV from 622107-624716, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_03_itms.16678.16678.2 3.8689 0.3546 100.0 1437.5922 1438.661 7478.4 1 7.255 75.0 2 R.ILSVESSIIDFSK.G * PARC_hx3_02_itms.18050.18050.2 4.9685 0.4841 100.0 2623.7922 2624.864 9450.3 1 9.087 50.0 1 K.LLNEFPQDSENPLTASEYVTSIR.N * PARC_hx3_02_itms.16593.16593.2 3.3856 0.1143 99.3 1351.1721 1351.5396 6776.8 1 4.201 81.8 1 R.FLLSSEDIEGLK.F * PARC_hx3_03_itms.17234.17234.2 4.5462 0.3319 100.0 1669.4521 1669.9158 7593.8 1 7.249 70.0 4 K.NISALINSLDPSPISK.I * PARC_hx3_03_itms.17081.17081.2 3.9667 0.3572 100.0 1912.3922 1913.0477 7783.5 1 5.87 59.4 2 K.LNSDDSLSPDEFFQLGK.D YLR342W 11 15 9.0% 1876 214849 7.2 U FKS1 SGDID:S000004334, Chr XII from 809997-815627, Verified ORF, "Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling" PARC_hx3_02_itms.13396.13396.2 2.9785 0.2677 96.2 1436.9122 1437.5059 6987.4 1 4.925 66.7 1 K.IEGDNSLEAADFR.W PARC_hx3_03_itms.13877.13877.2 3.5884 0.1715 96.2 1346.3722 1346.4949 7316.2 1 5.409 80.0 1 Y.LLCWGEANQVR.F * PARC_hx3_02_itms.15890.15890.2 3.4519 0.3102 100.0 1738.8922 1739.8549 7043.6 1 6.418 69.2 1 K.CALDYLDSPLCQQR.Q * PARC_hx3_03_itms.18605.18605.2 2.7604 0.3062 100.0 1440.4922 1440.6384 5069.8 1 5.873 77.3 1 R.LGDVVWDDVFFK.T PARC_hx3_03_itms.18168.18168.2 4.7126 0.4218 100.0 2409.9722 2409.5732 10783.4 1 8.168 60.5 3 R.APTFFVSQDDNNFETEFFPR.D * PARC_hx3_02_itms.17843.17843.2 5.3676 0.4753 100.0 2646.172 2646.867 5622.1 1 8.725 54.5 1 R.AYPDLQIAYLDEEPPLTEGEEPR.I PARC_hx3_02_itms.13979.13979.2 3.3706 0.4049 100.0 1298.4321 1298.4819 6024.8 1 6.841 75.0 1 R.VQLSGNPILGDGK.S PARC_hx3_02_itms.17776.17776.2 3.847 0.3821 100.0 2429.7122 2429.6086 5760.8 1 6.441 44.7 2 R.GEYIQLIDANQDNYLEECLK.I * PARC_hx3_04_itms.13828.13828.2 4.3603 0.418 100.0 1785.4521 1785.9542 5827.6 1 8.025 63.3 1 R.YEEQTTNHPVAIVGAR.E PARC_hx3_03_itms.15670.15670.2 4.1117 0.1619 100.0 1857.0122 1857.027 8336.3 2 6.875 55.9 2 R.EYIFSENSGVLGDVAAGK.E PARC_hx3_04_itms.16534.16534.2 2.3518 0.2274 99.5 995.0522 995.1258 5229.7 41 4.385 71.4 1 R.NSWIGYVR.M YCL043C 3 3 9.0% 522 58227 4.5 U PDI1 SGDID:S000000548, Chr III from 50221-48653, reverse complement, Verified ORF, "Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, essential for the formation of disulfide bonds in secretory and cell-surface proteins, unscrambles non-native disulfide bonds" * PARC_hx3_02_itms.15892.15892.2 4.051 0.1875 100.0 1524.4122 1522.8058 8484.4 2 3.873 70.8 1 L.FTELAKKNRGLMN.F * PARC_hx3_02_itms.18692.18692.2 3.9573 0.3279 100.0 1942.7522 1942.0863 4944.4 1 6.653 59.4 1 K.YGLPQLSEEAFDELSDK.I * PARC_hx3_03_itms.16663.16663.2 2.5506 0.1991 98.6 1764.9321 1763.0868 5666.5 1 5.124 50.0 1 R.GVVIEGYPTIVLYPGGK.K contaminant_SPA1_STAAU 4 5 9.0% 524 57320 5.7 U owl|P02976| IMMUNOGLOBULIN G BINDING PROTEIN A PRECURSOR (PROTEIN A). - STAPHYLOCOCCUS... PARC_hx3_04_itms.18221.18221.2 2.676 0.3405 100.0 1562.9722 1563.6665 4557.4 1 6.176 66.7 1 Q.HDEAQQNAFYQVL.N * PARC_hx3_03_itms.17986.17986.3 3.7787 0.205 100.0 2383.9443 2382.6099 10495.0 61 4.574 30.3 1 K.DQQSAFYEILNMPNLNEAQR.N * PARC_hx3_02_itms.15160.15160.2 3.4146 0.3106 100.0 1542.3722 1542.7502 6118.7 1 5.806 79.2 2 Y.EILNMPNLNEAQR.N PARC_hx3_02_itms.11884.11884.2 3.6427 0.3892 100.0 1461.4521 1461.5254 5059.0 1 6.409 76.9 1 K.DDPSQSTNVLGEAK.K YGR193C 2 2 9.0% 410 45362 5.7 U PDX1 SGDID:S000003425, Chr VII from 885746-884514, reverse complement, Verified ORF, "Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP) of the mitochondrial pyruvate dehydrogenase (PDH) complex, plays a structural role in the complex by binding and positioning E3 to the dihydrolipoamide acetyltransferase (E2) core" * PARC_hx3_03_itms.20017.20017.2 3.1983 0.3583 100.0 2347.2522 2348.566 8345.0 2 6.037 33.3 1 K.DVDVGEPIAYIADVDDDLATIK.L * PARC_hx3_03_itms.20963.20963.2 2.8701 0.3358 100.0 1814.0922 1813.0599 9870.4 1 6.042 64.3 1 K.YFDPIFEDLVTLSPR.E YNL217W 2 2 8.9% 326 37151 8.3 U YNL217W SGDID:S000005161, Chr XIV from 240332-241312, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_04_itms.21394.21394.2 2.6892 0.281 99.6 1566.4922 1566.9219 2487.0 1 5.323 53.6 1 R.LSPPVSLLPTISTLK.K * PARC_hx3_04_itms.16754.16754.2 3.4652 0.2863 100.0 1731.0922 1731.8658 7866.1 3 5.31 53.8 1 K.KGQYDYELIQVQCS.- YDR452W 5 6 8.5% 674 78344 6.9 U PPN1 SGDID:S000002860, Chr IV from 1362868-1364892, Verified ORF, "Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer" * PARC_hx3_04_itms.13708.13708.2 2.0615 0.3559 95.6 957.4122 957.11786 4514.4 5 5.968 75.0 1 F.ALGPTLQTR.E * PARC_hx3_03_itms.15596.15596.2 3.7396 0.4314 100.0 1249.2322 1249.4497 4991.2 1 6.811 72.7 1 R.SASFLTEVIPGK.L * PARC_hx3_04_itms.20931.20931.2 3.6222 0.3219 100.0 1852.1921 1853.1277 7150.6 1 5.765 56.7 1 K.YELGPAYVPQLFTPTR.F * PARC_hx3_04_itms.18070.18070.2 3.2868 0.3025 100.0 1260.1721 1260.432 6891.0 1 5.522 88.9 2 R.FVQFYADLEK.I * PARC_hx3_04_itms.13768.13768.2 2.7246 0.073 97.8 1278.5721 1278.4503 5735.5 1 3.443 83.3 1 R.LYENKPAWEK.Y YDL229W 3 5 8.2% 613 66602 5.4 U SSB1 SGDID:S000002388, Chr IV from 44066-45907, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; interacts with the phosphatase subunit Reg1p" YNL209W 3 5 8.2% 613 66595 5.5 U SSB2 SGDID:S000005153, Chr XIV from 252060-253901, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; homolog of SSB1" PARC_hx3_02_itms.15362.15362.2 3.5405 0.2457 100.0 1186.2922 1186.3536 6839.0 1 5.065 90.9 1 K.DAGAISGLNVLR.I PARC_hx3_04_itms.18957.18957.2 4.6113 0.4599 100.0 1731.4922 1731.0018 8328.8 1 8.928 64.7 1 R.IINEPTAAAIAYGLGAGK.S PARC_hx3_02_itms.18244.18244.2 5.0841 0.541 100.0 2166.1921 2167.418 7505.5 1 10.292 63.2 3 R.LESYVASIEQTVTDPVLSSK.L YIL117C 2 3 7.9% 318 34651 7.1 U PRM5 SGDID:S000001379, Chr IX from 141566-140610, reverse complement, Verified ORF, "Pheromone-regulated protein, predicted to have 1 transmembrane segment; induced during cell integrity signaling" * PARC_hx3_04_itms.17115.17115.2 3.2501 0.3328 100.0 1221.3722 1221.3556 7490.3 1 6.029 80.0 1 R.PLFSLASESNR.N * PARC_hx3_04_itms.19638.19638.2 3.8391 0.2936 100.0 1568.3922 1568.81 5962.5 1 5.265 80.8 2 R.NSLFISPTGDILYK.T YLR197W 2 2 7.7% 504 56864 8.9 U SIK1 SGDID:S000004187, Chr XII from 546099-547613, Verified ORF, "Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects" * PARC_hx3_04_itms.20067.20067.2 2.2231 0.2133 98.1 2217.7722 2218.3794 5484.8 1 4.741 35.7 1 K.GAAEALENANDISEGLVSESLK.A * PARC_hx3_02_itms.16683.16683.2 3.3326 0.2575 100.0 1900.5521 1899.0642 5152.9 1 5.698 50.0 1 R.IDNYSEEPSNVFGSVLK.K contaminant_INT-STD1 4 5 7.4% 607 69271 6.1 U BSA * PARC_hx3_02_itms.17225.17225.2 2.9296 0.2497 99.6 1956.0322 1957.1443 4356.1 1 5.341 64.7 1 K.DAIPENLPPLTADFAEDK.D * PARC_hx3_03_itms.15813.15813.2 4.3361 0.4297 100.0 1480.4122 1480.7068 8574.3 1 8.274 75.0 2 K.LGEYGFQNALIVR.Y * PARC_hx3_04_itms.16320.16320.2 2.7795 0.2552 97.6 1017.9322 1018.204 5424.6 4 5.005 81.2 1 Y.GFQNALIVR.Y * PARC_hx3_03_itms.13663.13663.2 2.8212 0.3485 100.0 1512.4321 1512.7465 7686.5 1 5.514 61.5 1 K.VPQVSTPTLVEVSR.S YLL029W 4 7 7.3% 749 84924 6.9 U YLL029W SGDID:S000003952, Chr XII from 81460-83709, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_04_itms.16421.16421.2 3.0113 0.0503 97.4 1500.6522 1500.5645 11098.3 7 4.373 58.3 1 R.DLLNFNDDHPDGK.S * PARC_hx3_02_itms.16671.16671.2 2.8399 0.1815 99.2 1860.4122 1861.9745 5448.9 1 5.199 53.8 1 R.QNEDPITWQEWCVR.E * PARC_hx3_04_itms.20045.20045.2 3.6657 0.2876 100.0 1347.5122 1347.5596 7875.0 1 6.59 85.0 1 Y.FAWLEQQLVGR.E * PARC_hx3_04_itms.21212.21212.2 4.1313 0.4177 100.0 1887.3722 1889.1613 5171.0 1 6.87 65.6 4 R.LIFPENTPGFNIDAIAR.Q YDL077C 5 7 7.2% 1049 122881 7.1 U VAM6 SGDID:S000002235, Chr IV from 320120-316971, reverse complement, Verified ORF, "Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by facilitating guanine nucleotide exchange on small guanosine triphosphatase Ypt7p" * PARC_hx3_02_itms.14663.14663.2 3.1123 0.2802 100.0 1619.2722 1618.7814 8163.9 3 4.72 57.1 1 K.SSDITAILPTEQSQK.L * PARC_hx3_04_itms.19992.19992.2 3.7805 0.2492 100.0 1551.0122 1549.81 5115.4 1 5.139 79.2 2 K.LFQVYPDLLQNAK.N * PARC_hx3_02_itms.17403.17403.2 3.495 0.2621 100.0 1739.2122 1736.9213 6855.7 1 6.425 65.4 2 K.FVDYENGFTFLQQK.I * PARC_hx3_02_itms.14432.14432.2 2.4147 0.2822 99.6 1398.0521 1395.5522 6702.8 1 4.95 63.6 1 K.SLLETTSVYEPR.T * PARC_hx3_02_itms.16942.16942.2 6.4163 0.5046 100.0 2417.652 2417.6782 5802.8 1 8.584 61.9 1 K.LLNDAIESGSDQLPTNQLNFVK.Y contaminant_KERATIN15 6 15 7.2% 629 64511 6.5 U no description PARC_hx3_02_itms.12962.12962.2 4.6907 0.1167 100.0 1479.6122 1477.7007 11433.2 1 5.544 90.9 4 R.FLEQQNKVLETK.W * PARC_hx3_02_itms.18794.18794.1 3.0084 0.243 100.0 1303.59 1303.4521 11946.9 12 5.793 54.2 1 R.SLDLDSIIAEVGA.Q * PARC_hx3_04_itms.21502.21502.2 5.3556 0.3228 100.0 1306.4122 1303.4521 8516.6 1 6.55 79.2 7 R.SLDLDSIIAEVGA.Q PARC_hx3_02_itms.13863.13863.1 2.9816 0.2629 100.0 1139.48 1140.2965 6128.0 1 5.927 75.0 1 R.DYQELMNVK.L PARC_hx3_02_itms.13858.13858.2 3.1432 0.292 100.0 1140.2722 1140.2965 8311.6 2 6.005 87.5 1 R.DYQELMNVK.L PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K contaminant_TRYPSIN 7 13 7.0% 229 23993 7.9 U no description * PARC_hx3_04_itms.18046.18046.2 4.3625 0.4446 100.0 1685.2922 1686.8309 8460.1 1 7.525 66.7 1 F.CGGSLINSQWVVSAAH.C * PARC_hx3_04_itms.17955.17955.2 3.7411 0.2621 100.0 1526.4122 1526.6921 7473.4 1 6.477 64.3 2 C.GGSLINSQWVVSAAH.C * PARC_hx3_04_itms.18051.18051.2 4.8906 0.455 100.0 1468.7722 1469.6401 9078.6 1 7.799 73.1 4 G.GSLINSQWVVSAAH.C * PARC_hx3_04_itms.18099.18099.2 3.7182 0.3854 100.0 1412.6322 1412.5883 8427.5 1 7.39 70.8 1 G.SLINSQWVVSAAH.C * PARC_hx3_04_itms.16784.16784.2 4.075 0.3765 100.0 1324.7722 1325.51 8754.0 1 6.987 86.4 3 S.LINSQWVVSAAH.C * PARC_hx3_03_itms.12906.12906.2 4.1411 0.3461 100.0 1212.2922 1212.3506 8281.8 1 6.772 90.0 1 L.INSQWVVSAAH.C * PARC_hx3_03_itms.11955.11955.2 2.8024 0.3383 100.0 984.77216 985.08734 3520.2 1 6.407 93.8 1 N.SQWVVSAAH.C YHR028C 4 4 6.5% 818 93404 5.5 U DAP2 SGDID:S000001070, Chr VIII from 167427-164971, reverse complement, Verified ORF, "Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor; localizes to the vacuolar membrane; similar to Ste13p" * PARC_hx3_02_itms.15116.15116.2 3.4324 0.3539 100.0 1689.6122 1689.8163 4555.1 1 5.851 64.3 1 K.SVYDDSYNSVLLEGK.T * PARC_hx3_04_itms.16844.16844.2 2.3134 0.1162 98.1 900.09216 900.06537 2802.8 1 4.244 91.7 1 R.LYFISTR.K * PARC_hx3_03_itms.17336.17336.2 2.4297 0.0811 95.0 2040.7722 2041.2653 8255.7 1 3.881 47.2 1 R.DQISAASLYGSLTFVDPQK.I * PARC_hx3_03_itms.14879.14879.2 2.8808 0.2761 100.0 1382.3322 1382.5768 5674.7 1 5.686 72.7 1 K.YGMSVAPVTDWR.F YLR220W 2 3 6.5% 322 34250 5.1 U CCC1 SGDID:S000004210, Chr XII from 576827-577795, Verified ORF, "Putative vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack the ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation" * PARC_hx3_03_itms.12867.12867.2 2.6857 0.1041 98.5 986.0122 986.19977 4246.8 2 6.196 87.5 1 K.NAVVTLIQK.A * PARC_hx3_04_itms.18660.18660.2 3.1807 0.3535 100.0 1351.1122 1351.5046 7156.2 1 5.712 77.3 2 K.ANLGFFQSVDPR.V YHR174W 2 6 6.4% 437 46914 6.0 U ENO2 SGDID:S000001217, Chr VIII from 451327-452640, Verified ORF, "Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is induced in response to glucose" PARC_hx3_04_itms.13540.13540.2 3.3977 0.2866 100.0 1160.3121 1160.3152 4474.7 3 5.417 77.8 1 R.IGSEVYHNLK.S * PARC_hx3_03_itms.15659.15659.2 4.0936 0.4598 100.0 1853.5122 1856.0862 7377.7 1 8.384 64.7 5 K.TAGIQIVADDLTVTNPAR.I contaminant_KERATIN14 5 9 6.3% 638 65871 8.1 U no description PARC_hx3_02_itms.12962.12962.2 4.6907 0.1167 100.0 1479.6122 1477.7007 11433.2 1 5.544 90.9 4 R.FLEQQNKVLETK.W PARC_hx3_02_itms.13863.13863.1 2.9816 0.2629 100.0 1139.48 1140.2965 6128.0 1 5.927 75.0 1 R.DYQELMNVK.L PARC_hx3_02_itms.13858.13858.2 3.1432 0.292 100.0 1140.2722 1140.2965 8311.6 2 6.005 87.5 1 R.DYQELMNVK.L PARC_hx3_02_itms.16499.16499.2 2.4911 0.2679 99.6 1264.6122 1264.4644 6743.6 1 5.244 80.0 1 K.LALDVEIATYR.K PARC_hx3_02_itms.10497.10497.2 2.5921 0.1503 99.2 1006.0522 1006.0667 4357.9 2 4.792 92.9 2 K.LLEGEECR.M YLR396C 3 3 5.5% 691 79271 5.3 U VPS33 SGDID:S000004388, Chr XII from 912310-910235, reverse complement, Verified ORF, "ATP-binding protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at both the Golgi-to-endosome and endosome-to-vacuole stages of protein transport" * PARC_hx3_03_itms.16537.16537.2 4.2592 0.3414 100.0 1708.2522 1706.9365 4981.7 1 7.587 64.3 1 N.SLLTFQDLTQSTPVR.K * PARC_hx3_02_itms.14744.14744.2 2.5874 0.1434 98.5 1379.3121 1379.5126 6400.7 12 3.901 68.2 1 K.EFVDSLGSLQQR.Q * PARC_hx3_04_itms.13754.13754.2 2.3268 0.1254 97.3 1215.3522 1215.3489 5119.1 12 4.245 60.0 1 K.NHTTLSSDVLK.V YJL172W 2 2 5.4% 576 64597 5.5 U CPS1 SGDID:S000003708, Chr X from 97731-99461, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions" * PARC_hx3_04_itms.22803.22803.2 5.2685 0.3749 100.0 2319.0322 2319.4988 7899.7 1 7.818 62.5 1 R.YGDDGIYSIIDEGEGIMEVDK.D * PARC_hx3_04_itms.17261.17261.2 2.5789 0.2043 99.5 1131.6322 1132.3141 4627.1 1 4.161 83.3 1 K.TILGAPFCPR.R YLR148W 4 4 5.3% 918 107398 7.0 U PEP3 SGDID:S000004138, Chr XII from 434642-437398, Verified ORF, "Vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis, forms complex with Pep5p that mediates protein transport to the vacuole" * PARC_hx3_02_itms.17285.17285.2 3.4629 0.2197 100.0 1706.1322 1706.8926 4207.0 1 5.266 61.5 1 K.FPLVLPDESEQFER.L * PARC_hx3_04_itms.18760.18760.2 3.0154 0.2211 100.0 951.27216 951.15393 5102.0 1 4.445 92.9 1 K.TSIFLLTR.L * PARC_hx3_02_itms.16004.16004.2 3.1637 0.3079 100.0 1473.8522 1474.6946 8125.3 1 6.015 66.7 1 R.TILNDSNEILTIK.D * PARC_hx3_02_itms.14625.14625.2 3.0889 0.1367 98.7 1571.4722 1572.7527 6804.9 1 4.639 61.5 1 K.IDQPISIDETELAK.W YOR291W 6 6 5.1% 1472 166749 6.1 U YOR291W SGDID:S000005817, Chr XV from 861172-865590, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_03_itms.11243.11243.2 2.5079 0.3308 100.0 953.5722 954.07086 3287.2 1 5.952 87.5 1 R.IYGTGLSSR.R * PARC_hx3_04_itms.17673.17673.2 3.7187 0.4873 100.0 1399.0721 1398.7069 2956.7 1 7.858 76.9 1 R.IAPGQTAALAMVVR.T * PARC_hx3_02_itms.17342.17342.2 2.5703 0.3398 100.0 1488.4922 1490.6531 6921.4 1 6.068 57.7 1 R.SVDGNLLGDPLDFK.M * PARC_hx3_04_itms.18048.18048.2 3.0098 0.1682 99.2 1975.1522 1976.1124 6689.5 5 4.704 43.8 1 R.ENTFTDNDPHNFLGVVR.S * PARC_hx3_03_itms.16911.16911.2 3.6914 0.2155 100.0 1127.7122 1128.27 6541.9 1 5.856 87.5 1 R.SFEFLSELR.R * PARC_hx3_02_itms.16976.16976.2 2.2463 0.2613 99.2 1378.1921 1377.537 2634.1 1 5.184 68.2 1 K.STLPADFEEVLR.C YDR135C 5 8 4.8% 1515 171120 8.4 U YCF1 SGDID:S000002542, Chr IV from 727546-722999, reverse complement, Verified ORF, "Vacuolar glutathione S-conjugate transporter of the ATP-binding cassette family, has a role in detoxifying metals such as cadmium, mercury, and arsenite; also transports unconjugated bilirubin; similar to human cystic fibrosis protein CFTR" * PARC_hx3_04_itms.18110.18110.2 2.8972 0.1966 99.6 1108.3121 1108.3231 7503.7 3 5.636 72.2 1 K.SALTALIYQK.S * PARC_hx3_03_itms.17378.17378.2 4.3517 0.3207 100.0 2071.3523 2072.2817 5744.6 1 6.928 62.5 2 R.LFTFFTNEELQPDSVQR.L * PARC_hx3_03_itms.16116.16116.2 3.8635 0.4818 100.0 1468.1322 1468.7106 8999.0 1 8.209 70.8 2 R.APMTFFETTPIGR.I * PARC_hx3_04_itms.18922.18922.2 3.4685 0.3762 100.0 1789.5922 1790.0262 4554.8 1 6.288 60.0 2 K.LSIIPQDSQVFEGTVR.E * PARC_hx3_02_itms.16990.16990.2 4.3507 0.4094 100.0 1977.5922 1978.1252 8142.4 1 8.089 66.7 1 R.ENIDPINQYTDEAIWR.A YBR118W 2 3 4.1% 458 50033 9.0 U TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF1; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" YPR080W 2 3 4.1% 458 50033 9.0 U TEF1 SGDID:S000006284, Chr XVI from 700592-701968, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes" PARC_hx3_03_itms.13004.13004.2 2.7932 0.1948 99.6 976.5722 976.1607 3847.5 1 4.366 92.9 1 R.LPLQDVYK.I PARC_hx3_04_itms.14847.14847.2 3.3216 0.2381 100.0 1025.6921 1026.2241 5187.7 1 5.503 90.0 2 K.IGGIGTVPVGR.V contaminant_KERATIN16 3 7 3.9% 534 57265 6.6 U no description PARC_hx3_02_itms.12962.12962.2 4.6907 0.1167 100.0 1479.6122 1477.7007 11433.2 1 5.544 90.9 4 Q.FLEQQNKVLETK.W PARC_hx3_02_itms.11271.11271.1 1.9795 0.195 97.7 1107.64 1108.196 5163.2 3 5.035 68.8 1 R.AQYEEIAQR.S PARC_hx3_02_itms.11249.11249.2 3.1946 0.337 100.0 1108.3121 1108.196 5142.1 1 5.625 87.5 2 R.AQYEEIAQR.S YNL268W 2 2 3.8% 611 68090 7.0 U LYP1 SGDID:S000005212, Chr XIV from 138551-140386, Verified ORF, "Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids" * PARC_hx3_03_itms.11960.11960.2 2.0171 0.1435 96.7 1023.2322 1024.1619 3388.5 1 3.376 87.5 1 R.FSNIITSNK.W PARC_hx3_04_itms.16497.16497.2 3.219 0.4482 100.0 1400.0721 1399.5461 8456.6 1 7.84 69.2 1 R.NPGAWGPGIISSDK.S YNR013C 3 3 3.6% 894 99490 8.0 U PHO91 SGDID:S000005296, Chr XIV from 651714-649030, reverse complement, Verified ORF, "Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth" * PARC_hx3_03_itms.13296.13296.2 2.9603 0.1298 99.2 1133.2522 1133.3329 4428.0 1 4.297 88.9 1 K.FVAALNQELK.K * PARC_hx3_04_itms.20477.20477.2 2.5265 0.0607 95.6 1410.7722 1408.6781 5259.5 3 3.156 72.7 1 R.LISIYTQLSELK.D * PARC_hx3_04_itms.18506.18506.2 2.8137 0.4122 100.0 1170.3522 1171.3818 5766.3 1 6.266 94.4 1 R.YLTVGTFITR.G YMR246W 2 2 3.6% 694 77267 6.6 U FAA4 SGDID:S000004860, Chr XIII from 759806-761890, Verified ORF, "Long chain fatty acyl-CoA synthetase, regulates protein modification during growth in the presence of ethanol, functions to incorporate palmitic acid into phospholipids and neutral lipids" * PARC_hx3_04_itms.14854.14854.2 2.7715 0.2697 99.6 1512.6921 1511.6744 6709.5 1 4.795 75.0 1 K.FVIHNEPIDPSDK.R * PARC_hx3_04_itms.16318.16318.2 3.3554 0.3088 100.0 1325.4722 1326.5358 9157.8 1 6.022 72.7 1 R.DILAAVKPDVER.V YDR080W 3 4 3.5% 992 113412 4.9 U VPS41 SGDID:S000002487, Chr IV from 604004-606982, Verified ORF, "Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of protein transport" * PARC_hx3_04_itms.19271.19271.2 3.0737 0.2352 100.0 1272.4321 1272.4899 3774.0 1 4.969 80.0 1 R.SQLLNIPFPSR.I * PARC_hx3_02_itms.19406.19406.2 3.9272 0.398 100.0 1746.6721 1743.8645 11849.1 1 7.113 69.2 2 K.LFSVEDFEEELETR.I * PARC_hx3_03_itms.14928.14928.2 3.0067 0.2724 100.0 1145.2722 1145.344 7196.2 1 5.047 83.3 1 K.NPQLAIDFVK.N YPL045W 3 3 3.5% 798 92741 7.1 U VPS16 SGDID:S000005966, Chr XVI from 467257-469653, Verified ORF, "Subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; part of the Class C Vps complex essential for membrane docking and fusion at both the Golgi-to-endosome and endosome-to-vacuole stages of protein transport" * PARC_hx3_02_itms.13836.13836.1 1.8731 0.0897 97.2 1052.05 1051.1033 3294.4 3 4.087 64.3 1 K.NPSFDWER.L * PARC_hx3_03_itms.12220.12220.2 2.3731 0.242 99.5 1190.1322 1190.3445 3156.9 56 5.564 61.1 1 R.VQPQTSNIFR.I * PARC_hx3_03_itms.15201.15201.2 3.2835 0.3144 100.0 1237.3722 1237.441 5751.4 3 5.617 88.9 1 K.LWIYQESLGK.R YER001W 2 2 3.5% 762 88529 7.2 U MNN1 SGDID:S000000803, Chr V from 153519-155807, Verified ORF, "Alpha-1,3-mannosyltransferase, integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family" * PARC_hx3_03_itms.15522.15522.2 4.2889 0.331 100.0 1536.5721 1536.771 5037.5 1 7.732 79.2 1 R.FEGNTLPIQVVYR.G * PARC_hx3_04_itms.15112.15112.2 4.9388 0.3496 100.0 1642.4722 1642.7631 7276.5 1 8.298 84.6 1 R.TTHGELITLDEEQR.L contaminant_NRL_1MCOH 2 2 3.5% 428 46852 8.9 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H... * PARC_hx3_02_itms.12304.12304.1 2.0477 0.0813 97.1 835.53 835.994 3075.6 25 3.397 75.0 1 K.DTLMISR.T * PARC_hx3_03_itms.11446.11446.1 1.8124 0.1268 97.0 838.51 839.02264 2765.5 1 4.653 78.6 1 K.ALPAPIEK.T YMR231W 3 3 3.0% 1029 117477 5.8 U PEP5 SGDID:S000004844, Chr XIII from 733544-736633, Verified ORF, "Peripheral vacuolar membrane protein required for protein trafficking and vacuole biogenesis; forms complex with Pep3p that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, also interacts with Pep7p" * PARC_hx3_04_itms.13991.13991.2 3.1451 0.2096 99.8 1373.8922 1374.5364 4586.3 1 4.781 80.0 1 R.EQLYHSQVELK.N * PARC_hx3_04_itms.17842.17842.2 3.2828 0.294 100.0 1035.0122 1035.2314 4301.3 1 4.667 93.8 1 R.ILLFNTTGR.N * PARC_hx3_04_itms.14022.14022.2 3.7588 0.312 100.0 1328.7322 1329.4955 10075.6 1 6.144 80.0 1 K.LFEAQHEVVEK.N YPL019C 2 2 2.9% 835 96553 7.4 U VTC3 SGDID:S000005940, Chr XVI from 517016-514509, reverse complement, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion" * PARC_hx3_02_itms.17242.17242.2 3.6267 0.3671 100.0 1610.7122 1611.7484 5984.8 1 5.987 66.7 1 R.DFDNIQNFIVEEK.L * PARC_hx3_03_itms.13013.13013.2 2.1927 0.144 97.1 1203.4122 1203.3378 3156.4 122 3.968 55.0 1 K.ISVPDGKTTER.Q YLR241W 2 3 2.8% 782 89344 8.1 U YLR241W SGDID:S000004231, Chr XII from 620475-622823, Uncharacterized ORF, "Hypothetical protein" * PARC_hx3_03_itms.14844.14844.2 3.2267 0.3059 100.0 998.1122 998.21075 2519.8 2 5.462 93.8 1 R.LSGIPIELR.D * PARC_hx3_04_itms.21720.21720.2 2.6524 0.1112 97.6 1579.5922 1578.7594 4049.6 2 3.383 58.3 2 K.EVDAIEYLEQQLK.F YJL198W 2 2 2.7% 881 97689 7.1 U PHO90 SGDID:S000003734, Chr X from 60843-63488, Verified ORF, "Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth" * PARC_hx3_02_itms.15965.15965.2 3.4213 0.1087 99.5 1371.4122 1371.5298 9594.1 1 4.383 80.0 1 R.TELIESEQFFK.D * PARC_hx3_03_itms.14218.14218.2 3.3288 0.3889 100.0 1234.3121 1234.4355 6889.8 1 6.564 79.2 1 K.AVSSSGLLSTIAK.A YGL006W 2 2 2.0% 1173 130861 7.4 U PMC1 SGDID:S000002974, Chr VII from 485925-489446, Verified ORF, "Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions; prevents growth inhibition by activation of calcineurin in the presence of elevated concentrations of calcium" * PARC_hx3_03_itms.14913.14913.2 3.463 0.2831 100.0 1434.1921 1434.5919 4823.2 1 5.533 79.2 1 K.NAGISLPEISNYR.K * PARC_hx3_03_itms.13070.13070.2 2.6789 0.1929 99.3 1262.9321 1263.4362 4382.2 3 4.341 65.0 1 K.VVQTIPFESSR.K YBL017C 2 2 1.9% 1579 177777 4.9 U PEP1 SGDID:S000000113, Chr II from 191586-186847, reverse complement, Verified ORF, "Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments" * PARC_hx3_02_itms.15544.15544.2 3.0161 0.1722 99.2 1959.3722 1957.9679 5787.8 1 4.067 60.0 1 K.TCEENDFEDWNLAEGK.C * PARC_hx3_02_itms.17477.17477.2 4.1637 0.4085 100.0 1716.4122 1715.8634 7219.0 1 6.945 80.8 1 K.VFEDLQLFETACDK.C YLL048C 2 4 1.8% 1661 189161 8.1 U YBT1 SGDID:S000003971, Chr XII from 46264-41279, reverse complement, Verified ORF, "Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport; similar to mammalian bile transporters" * PARC_hx3_04_itms.19032.19032.2 4.3683 0.2842 100.0 1536.3121 1536.6873 9180.3 2 5.828 70.8 2 K.NNILFNSPFNEAR.Y * PARC_hx3_03_itms.17171.17171.2 3.1352 0.2312 99.6 1832.6122 1832.1473 3579.3 1 4.916 59.4 2 R.SITIIPQDPTLFSGTIK.T YKL064W 2 2 1.5% 969 109736 7.5 U MNR2 SGDID:S000001547, Chr XI from 317408-320317, Verified ORF, "Putative magnesium transporter; has similarity to Alr1p and Alr2p, which mediate influx of Mg2+ and other divalent cations" * PARC_hx3_04_itms.18208.18208.2 3.5082 0.0079 97.0 1657.4321 1656.8826 8631.1 71 3.044 53.6 1 K.SRIQSGLQDNLLVGR.N * PARC_hx3_02_itms.14680.14680.2 3.5354 0.3279 100.0 1414.2122 1413.617 8044.6 1 6.397 75.0 1 R.IQSGLQDNLLVGR.N Reverse_YPL084W 2 3 1.3% 844 97276 5.4 U BRO1 SGDID:S000006005, Chr XVI from 394035-396569, Verified ORF, "Cytoplasmic class E vacuolar protein sorting (VPS) factor that coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes" * PARC_hx3_02_itms.15976.15976.2 3.3261 0.1638 99.6 1205.9722 1205.2236 5105.4 1 4.325 83.3 2 K.TIDDNNIEDR.L * PARC_hx3_04_itms.21533.21533.2 3.0841 0.2279 95.5 1317.5721 1318.383 4860.6 2 4.468 75.0 1 K.TIDDNNIEDRL.E Proteins Peptide IDs Spectra Unfiltered 10674 56775 61162 Filtered 81 480 902 Forward matches 80 478 899 Decoy matches 1 2 3 Forward FP rate 1.25 0.42 0.33 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0