Crystal structure of the novel aspartic proteinase zymogen proplasmepsin II from plasmodium falciparum

Nat Struct Biol. 1999 Jan;6(1):32-7. doi: 10.1038/4905.

Abstract

Proplasmepsin II is the zymogen of plasmepsin II, an aspartic proteinase used by Plasmodiumfalciparum to digest hemoglobin during the blood stage of malaria. A large shift between the N-domain and the central and C-domains of proplasmepsin II opens the active site cleft, preventing the formation of a functional aspartic proteinase active site. This mode of inhibition of catalytic activity has not been observed in any other aspartic proteinase zymogen. Instead of occluding a pre-formed active site, as in the gastric aspartic proteinase zymogens, the prosegment of proplasmepsin II interacts extensively with the C-domain and serves as a 'harness' to keep the domains apart. Disruption of key salt bridges at low pH may be important in activation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Aspartic Acid Endopeptidases / chemistry*
  • Aspartic Acid Endopeptidases / genetics
  • Crystallography, X-Ray
  • Enzyme Precursors / chemistry*
  • Enzyme Precursors / genetics
  • Molecular Sequence Data
  • Plasmodium falciparum / chemistry*
  • Protein Conformation
  • Protozoan Proteins
  • Sequence Analysis

Substances

  • Enzyme Precursors
  • Protozoan Proteins
  • Aspartic Acid Endopeptidases
  • proplasmepsin II
  • plasmepsin II

Associated data

  • PDB/1PFZ
  • PDB/R1PFZSF