Systematic search for zinc-binding proteins in Escherichia coli

Eur J Biochem. 2002 May;269(9):2403-13. doi: 10.1046/j.1432-1033.2002.02900.x.

Abstract

A systematic search for Escherichia coli proteins with the zinc-binding activity was performed using the assay of radioactive Zn(II) binding to total E. coli proteins fractionated by two methods of two-dimensional gel electrophoresis. A total of 30-40 radioactive spots were identified, of which 14 have been assigned from N-terminal sequencing. In addition to five known zinc-binding proteins, nine zinc-binding proteins were newly identified including: acetate kinase (AckA), DnaK, serine hydroxymethyltransferase (GlyA), transketolase isozymes (TktA/TktB), translation elongation factor Ts (Tsf), ribosomal proteins L2 (RplB), L13 (RplM) and one of S15 (RpsO), S16 (RpsP) or S17 (RpsQ). Together with about 20 known zinc-binding proteins, the total number of zinc-binding proteins in E. coli increased up to more than 30 species (or more than 3% of about 1000 proteins expressed under laboratory culture conditions). The specificity and affinity of zinc-binding were analysed for some of the zinc-binding proteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / analysis*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Carrier Proteins / analysis*
  • Carrier Proteins / chemistry
  • Carrier Proteins / metabolism
  • Escherichia coli / chemistry*
  • Zinc / metabolism

Substances

  • Bacterial Proteins
  • Carrier Proteins
  • zinc-binding protein
  • Zinc