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Protein Overview: TIF3

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run TID3 No Comments Cheeseman IM, et al. (2002)
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TIF3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..92] PSI-BLAST 46.522879 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
2 View Details [93..217] PSI-BLAST 14.045757 Poly(A)-binding protein
3 View Details [218..336] PSI-BLAST 14.045757 Poly(A)-binding protein
4 View Details [337..436] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 4.50438526063124 bayes_pls_golite062009
  • structural molecule activity
  • 4.28696884073791 bayes_pls_golite062009
  • translation initiation factor activity
  • 3.27900316559423 bayes_pls_golite062009
  • nucleic acid binding
  • 3.2381342715237 bayes_pls_golite062009
  • mRNA binding
  • 2.92795844574986 bayes_pls_golite062009
  • binding
  • 2.62183511329394 bayes_pls_golite062009
  • 1.49431666307335 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.90573796517364 bayes_pls_golite062009
  • RNA cap binding
  • 0.65495719965273 bayes_pls_golite062009
  • protein binding
  • 0.42571879933058 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.32812362201346 bayes_pls_golite062009
  • DNA binding
  • 0.139020718026377 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0995666109361987 bayes_pls_golite062009
    2
    Term Confidence Notes
  • RNA binding
  • 4.50438526063124 bayes_pls_golite062009
  • structural molecule activity
  • 4.28696884073791 bayes_pls_golite062009
  • translation initiation factor activity
  • 3.27900316559423 bayes_pls_golite062009
  • nucleic acid binding
  • 3.2381342715237 bayes_pls_golite062009
  • mRNA binding
  • 2.92795844574986 bayes_pls_golite062009
  • binding
  • 2.62183511329394 bayes_pls_golite062009
  • 1.49431666307335 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.90573796517364 bayes_pls_golite062009
  • RNA cap binding
  • 0.65495719965273 bayes_pls_golite062009
  • protein binding
  • 0.42571879933058 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.32812362201346 bayes_pls_golite062009
  • DNA binding
  • 0.139020718026377 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0995666109361987 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle