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Protein Overview: MSF1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data MSF1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..469] PSI-BLAST 49.0 Domains B1 and B5 of PheRS-beta, PheT; Domain B2 of PheRS-beta, PheT; Phenylalanyl-tRNA synthetase; Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain; B3/B4 domain of PheRS, PheT

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 7.88410036819636 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
  • 7.1807508219467 bayes_pls_golite062009
  • ligase activity
  • 6.92073480193262 bayes_pls_golite062009
  • serine-tRNA ligase activity
  • 2.46505535069103 bayes_pls_golite062009
  • glycine-tRNA ligase activity
  • 2.29229136935761 bayes_pls_golite062009
  • threonine-tRNA ligase activity
  • 2.18642354927 bayes_pls_golite062009
  • catalytic activity
  • 1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
  • 1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
  • 1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
  • 1.72215103383322 bayes_pls_golite062009
  • binding
  • 0.966824335333342 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
  • 0.921492123574877 bayes_pls_golite062009
  • transcription regulator activity
  • 0.375542987753806 bayes_pls_golite062009
  • transcription activator activity
  • 0.36727492354438 bayes_pls_golite062009
  • nucleic acid binding
  • 0.281662799812287 bayes_pls_golite062009
  • protein binding
  • 0.0804954454681041 bayes_pls_golite062009
  • DNA binding
  • 0.0309732052586011 bayes_pls_golite062009
  • RNA binding
  • 0.0221706730298825 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
  • 0.00572514744734753 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle