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Protein Overview: RDR1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) NSA1 PMS1 RDR1

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..99] PSI-BLAST 36.0 PUT3
2 View Details [100..546] MSA 9.232982 View MSA. No confident structure predictions are available.
3 View Details [223..351] Pfam 19.568636 No description for PF04082.9 was found. No confident structure predictions are available.
4 View Details [352..546] MSA 4.393996 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.36540182658818 bayes_pls_golite062009
  • nucleic acid binding
  • 1.82012686871762 bayes_pls_golite062009
  • DNA binding
  • 1.78629392205727 bayes_pls_golite062009
  • transcription regulator activity
  • 1.70162817919532 bayes_pls_golite062009
  • transcription factor activity
  • 0.606922041618269 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.160255273911114 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0882387940255902 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle