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Protein Overview: LDB19

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) ADE6 BUL1 LDB19 RSP5 RUP1 UBP2 YHR131C

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data LDB19 and CHC1 Huh WK, et al. (2003)
View Data LDB19 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..79] deduced N/A No confident structure predictions are available.
2 View Details [80..387] MSA 3.004923 View MSA. No confident structure predictions are available.
3 View Details [388..818] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • clathrin binding
  • 2.57748868504781 bayes_pls_golite062009
  • binding
  • 2.01341910518392 bayes_pls_golite062009
  • protein binding
  • 1.608080422834 bayes_pls_golite062009
  • transporter activity
  • 1.10239137184953 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.949536954960448 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.781060752903079 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.660409340901077 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.56446678342098 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.486294295028555 bayes_pls_golite062009
  • channel activity
  • 0.465630241372545 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.465630241372545 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.455589501590218 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 0.44519612509266 bayes_pls_golite062009
  • potassium channel activity
  • 0.423464159542763 bayes_pls_golite062009
  • cation channel activity
  • 0.406614358442595 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 0.402494949667906 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 0.39571309893169 bayes_pls_golite062009
  • ion channel activity
  • 0.395022246697853 bayes_pls_golite062009
  • voltage-gated channel activity
  • 0.387394052239826 bayes_pls_golite062009
  • voltage-gated potassium channel activity
  • 0.326855275194847 bayes_pls_golite062009
  • gated channel activity
  • 0.266124158878986 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.0852462445742306 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle