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Protein Overview: CMR2

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) CMR2 SSA3
View Details Krogan NJ, et al. (2006) CMR2 MTC5

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run YJR012C No Comments Hazbun TR, et al. (2003)
View Run RIX7 No Comments Hazbun TR, et al. (2003)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..61] MSA 2.20399 View MSA. No confident structure predictions are available.
2 View Details [62..139] deduced N/A No confident structure predictions are available.
3 View Details [140..154]
[425..701]
PSI-BLAST 131.0 Phenylalanine activating domain of gramicidin synthetase 1
4 View Details [155..196]
[337..424]
[702..832]
PSI-BLAST 131.0 Phenylalanine activating domain of gramicidin synthetase 1
5 View Details [197..336] PSI-BLAST 131.0 Phenylalanine activating domain of gramicidin synthetase 1
6 View Details [833..910] PSI-BLAST 13.045757 Peptidyl carrier protein (PCP), thioester domain
7 View Details [911..973] deduced N/A Confident ab initio structure predictions are available.
8 View Details [974..1009]
[1023..1175]
PSI-BLAST 79.09691 Luciferase
9 View Details [1010..1022]
[1176..1510]
PSI-BLAST 79.09691 Luciferase
10 View Details [1511..1648] PSI-BLAST 79.09691 Luciferase

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • catalytic activity
  • 1.06902368506559 bayes_pls_golite062009
  • ligase activity
  • 0.763554068965808 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
  • 0.619465698462354 bayes_pls_golite062009
    3
    Term Confidence Notes
  • substrate-specific transporter activity
  • 0.205687421762746 bayes_pls_golite062009
  • transporter activity
  • 0.164841961310903 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.39

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle