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Protein Overview: AMD1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) AMD1 YJL070C
View Details Krogan NJ, et al. (2006) AMD1 RRB1 YJL070C

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data AMD1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..240] MSA 1.021976 View MSA. No confident structure predictions are available.
2 View Details [241..293] deduced N/A Confident ab initio structure predictions are available.
3 View Details [294..562] Pfam 35.468521 Adenosine/AMP deaminase No confident structure predictions are available.
4 View Details [563..810] PSI-BLAST 43.0 No description for 1m7mA_ was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • catalytic activity
  • 1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
  • 1.12925526582667 bayes_pls_golite062009
  • transcription regulator activity
  • 0.867179877821333 bayes_pls_golite062009
  • nucleic acid binding
  • 0.784495708118775 bayes_pls_golite062009
  • DNA binding
  • 0.58985393219841 bayes_pls_golite062009
  • binding
  • 0.568044210518453 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
  • 0.248802326836448 bayes_pls_golite062009
  • hydrolase activity
  • 0.24275130580417 bayes_pls_golite062009
  • dihydroorotase activity
  • 0.203044795244555 bayes_pls_golite062009
  • deaminase activity
  • 0.18698811376434 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
  • 0.0954028693917728 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle