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Protein Overview: SWI6

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SWI6 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..201] MSA 1.285973 View MSA. No confident structure predictions are available.
2 View Details [202..511] PSI-BLAST 10043.0 Swi6 ankyrin-repeat fragment
3 View Details [512..600] PSI-BLAST 41.69897 bcl-3
4 View Details [601..803] ORFEUS 8.12 Prolactin (placental lactogen)

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • protein binding
  • 2.69918165732603 bayes_pls_golite062009
  • binding
  • 2.60916417202222 bayes_pls_golite062009
  • transcription regulator activity
  • 2.37103377984038 bayes_pls_golite062009
  • nucleic acid binding
  • 1.8957142857582 bayes_pls_golite062009
  • DNA binding
  • 1.78305438715057 bayes_pls_golite062009
  • transcription activator activity
  • 1.6418915400902 bayes_pls_golite062009
  • transcription factor activity
  • 1.2667825651547 bayes_pls_golite062009
  • transcription factor binding
  • 1.06366405671195 bayes_pls_golite062009
  • RNA binding
  • 0.969928411729387 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.949906091645366 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.590503097160372 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
  • 0.0462605323512499 bayes_pls_golite062009
    3
    Term Confidence Notes
  • protein binding
  • 2.69918165732603 bayes_pls_golite062009
  • binding
  • 2.60916417202222 bayes_pls_golite062009
  • transcription regulator activity
  • 2.37103377984038 bayes_pls_golite062009
  • nucleic acid binding
  • 1.8957142857582 bayes_pls_golite062009
  • DNA binding
  • 1.78305438715057 bayes_pls_golite062009
  • transcription activator activity
  • 1.6418915400902 bayes_pls_golite062009
  • transcription factor activity
  • 1.2667825651547 bayes_pls_golite062009
  • transcription factor binding
  • 1.06366405671195 bayes_pls_golite062009
  • RNA binding
  • 0.969928411729387 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.949906091645366 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.590503097160372 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
  • 0.0462605323512499 bayes_pls_golite062009
    4
    Term Confidence Notes
  • protein binding
  • 3.32153200117175 bayes_pls_golite062009
  • binding
  • 3.246345109977 bayes_pls_golite062009
  • receptor binding
  • 2.75738439909781 bayes_pls_golite062009
  • transcription regulator activity
  • 2.27089567891838 bayes_pls_golite062009
  • cytokine receptor binding
  • 1.13209989837612 bayes_pls_golite062009
  • cytokine activity
  • 0.865612008604712 bayes_pls_golite062009
  • growth factor activity
  • 0.805183150393473 bayes_pls_golite062009
  • catalytic activity
  • 0.263255675478865 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle