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Protein Overview: SKN7

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SKN7 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..67] deduced N/A No confident structure predictions are available.
2 View Details [68..201] PSI-BLAST 200.9897 Heat-shock transcription factor
3 View Details [202..369] MSA 25.748997 View MSA. No confident structure predictions are available.
4 View Details [370..500] PSI-BLAST 122.232149 PhoB; PhoB receiver domain
5 View Details [501..622] PSI-BLAST 122.232149 PhoB; PhoB receiver domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 5.55329976718261 bayes_pls_golite062009
  • DNA binding
  • 4.84466441605416 bayes_pls_golite062009
  • nucleic acid binding
  • 4.57954522145536 bayes_pls_golite062009
  • transcription factor activity
  • 4.12685284895733 bayes_pls_golite062009
  • binding
  • 3.52874320222492 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.3918869755162 bayes_pls_golite062009
  • transcription activator activity
  • 2.37668609508629 bayes_pls_golite062009
  • transcription repressor activity
  • 2.22485867684613 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.70025468248325 bayes_pls_golite062009
  • transcription factor binding
  • 0.85714789329232 bayes_pls_golite062009
  • protein binding
  • 0.753698599635855 bayes_pls_golite062009
  • two-component response regulator activity
  • 0.290986349914258 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle