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Protein Overview: CCH1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CCH1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..232] deduced N/A No confident structure predictions are available.
2 View Details [233..365] PSI-BLAST 19.0 KV1.1
3 View Details [366..426] deduced N/A Confident ab initio structure predictions are available.
4 View Details [427..611] MSA 4.065986 View MSA. No confident structure predictions are available.
5 View Details [612..1110] MSA 24.222986 View MSA. No confident structure predictions are available.
6 View Details [1111..1197] deduced N/A No confident structure predictions are available.
7 View Details [1198..1330] MSA 2.132996 View MSA. No confident structure predictions are available.
8 View Details [1331..1437] MSA 7.141995 View MSA. No confident structure predictions are available.
9 View Details [1438..1528] PSI-BLAST 3.522879 Sodium channel IIA
10 View Details [1529..1761] MSA 11.213994 View MSA. No confident structure predictions are available.
11 View Details [1762..1891] MSA 2.175984 View MSA. No confident structure predictions are available.
12 View Details [1892..2039] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5 No functions predicted.
6
Term Confidence Notes
  • metal ion transmembrane transporter activity
  • 4.7372448658795 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 4.63984862452408 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 4.6123766644348 bayes_pls_golite062009
  • voltage-gated potassium channel activity
  • 4.56176308768245 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 4.53708718755887 bayes_pls_golite062009
  • potassium channel activity
  • 4.51985608289081 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 4.5171803357978 bayes_pls_golite062009
  • voltage-gated channel activity
  • 4.51256290813453 bayes_pls_golite062009
  • cation channel activity
  • 4.45938408950249 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 4.18703661144599 bayes_pls_golite062009
  • gated channel activity
  • 3.79587174965364 bayes_pls_golite062009
  • substrate-specific channel activity
  • 3.72917222310854 bayes_pls_golite062009
  • ion channel activity
  • 3.48521592747971 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 3.39410147300457 bayes_pls_golite062009
  • channel activity
  • 3.39410147300457 bayes_pls_golite062009
  • transporter activity
  • 2.77619896060397 bayes_pls_golite062009
  • transmembrane transporter activity
  • 2.65613366364107 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 2.3511225030312 bayes_pls_golite062009
  • inward rectifier potassium channel activity
  • 2.22500563098935 bayes_pls_golite062009
  • ligand-gated channel activity
  • 1.95018194128504 bayes_pls_golite062009
  • ligand-gated ion channel activity
  • 1.95018194128504 bayes_pls_golite062009
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.
    11 No functions predicted.
    12 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle