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Protein Overview: HFM1

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..107] PSI-BLAST 37.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
2 View Details [108..884] PSI-BLAST 6.522879 Helicase-like "domain" of reverse gyrase; Topoisomerase "domain" of reverse gyrase
3 View Details [885..971] MSA 3.065994 View MSA. No confident structure predictions are available.
4 View Details [972..1187] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 2.4974940028864 bayes_pls_golite062009
  • nucleic acid binding
  • 1.49633029954726 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.49611313354225 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • helicase activity
  • 1.16085745407703 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • DNA binding
  • 0.967303417236485 bayes_pls_golite062009
  • transcription regulator activity
  • 0.748437190903548 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • microtubule motor activity
  • 0.38363601832205 bayes_pls_golite062009
  • protein binding
  • 0.378225828131122 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 0.3625050107782 bayes_pls_golite062009
  • DNA clamp loader activity
  • 0.27925703205288 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.249173645231486 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.22150712609541 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.0781650226500197 bayes_pls_golite062009
  • DNA polymerase activity
  • 4.95561462330096E-4 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
  • 2.5075656948209 bayes_pls_golite062009
  • protein binding
  • 1.71025015568774 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.71818218589805 bayes_pls_golite062009
  • actin binding
  • 0.68323011536902 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle