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Protein Overview: SLF1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SLF1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..257] ORFEUS 14.16 RBP1
2 View Details [258..363] MSA 6.075982 View MSA. No confident structure predictions are available.
3 View Details [364..447] MSA 2.037994 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • mRNA binding
  • 4.52007814408702 bayes_pls_golite062009
  • RNA binding
  • 4.50438526063124 bayes_pls_golite062009
  • nucleic acid binding
  • 3.64594243387558 bayes_pls_golite062009
  • binding
  • 3.00411894202318 bayes_pls_golite062009
  • structural constituent of ribosome
  • 2.95301685898669 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • 1.49431666307335 bayes_pls_golite062009
  • poly(U) RNA binding
  • 1.35467931535417 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.90573796517364 bayes_pls_golite062009
  • transcription regulator activity
  • 0.737458867828906 bayes_pls_golite062009
  • DNA binding
  • 0.691258294213766 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.599389001184667 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.32812362201346 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle