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Protein Overview: VPS3

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) PLB3 RPS10B SCM3 SUP35 SUP45 TRM12 VPS3

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data VPS3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..98] deduced N/A No confident structure predictions are available.
2 View Details [99..726] MSA 15.038994 View MSA. No confident structure predictions are available.
3 View Details [727..1011] deduced N/A No confident structure predictions are available.
4 View Details [407..491] deduced N/A No confident structure predictions are available.
5 View Details [492..1011] FFAS03 0.962 Clathrin heavy chain proximal leg segment

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • protein transporter activity
  • 2.99345877012947 bayes_pls_golite062009
  • binding
  • 2.33303322187387 bayes_pls_golite062009
  • transporter activity
  • 1.85346023606579 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.51565516399356 bayes_pls_golite062009
  • protein binding
  • 1.5114863464349 bayes_pls_golite062009
  • protein transmembrane transporter activity
  • 1.12112006227201 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.710528717985301 bayes_pls_golite062009
  • proton-transporting ATPase activity, rotational mechanism
  • 0.68860343348996 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.39311980867126 bayes_pls_golite062009
  • signal sequence binding
  • 0.279693431859311 bayes_pls_golite062009
  • nuclear localization sequence binding
  • 0.241630311762028 bayes_pls_golite062009
  • nucleic acid binding
  • 0.170608604167104 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.109435859778099 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0728493557966827 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.0641324729536009 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.0615190129942244 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle