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Protein Overview: RAD30

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD30 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..33]
[122..299]
PSI-BLAST 10119.0 DNA polymerase eta
2 View Details [34..121]
[300..388]
PSI-BLAST 10119.0 DNA polymerase eta
3 View Details [389..530] PSI-BLAST 10119.0 DNA polymerase eta
4 View Details [531..632] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA-directed DNA polymerase activity
  • 8.5725258398851 bayes_pls_golite062009
  • DNA polymerase activity
  • 8.52309706572764 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 6.34496739872612 bayes_pls_golite062009
  • DNA primase activity
  • 5.34779288251618 bayes_pls_golite062009
  • chromatin binding
  • 2.18085270555452 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.74380808085854 bayes_pls_golite062009
  • DNA binding
  • 1.69096430884207 bayes_pls_golite062009
  • nucleic acid binding
  • 1.57540655259696 bayes_pls_golite062009
  • binding
  • 1.40175931463327 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.06010018021303 bayes_pls_golite062009
  • catalytic activity
  • 1.04899053677564 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.83818211151495 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.83818211151495 bayes_pls_golite062009
  • transferase activity
  • 0.784455099927681 bayes_pls_golite062009
  • exonuclease activity
  • 0.778608024896469 bayes_pls_golite062009
  • damaged DNA binding
  • 0.39441061793492 bayes_pls_golite062009
  • protein binding
  • 0.354190470641287 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 0.0700154911930899 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
  • 3.3375695352073 bayes_pls_golite062009
  • DNA binding
  • 3.28852346568913 bayes_pls_golite062009
  • nucleic acid binding
  • 3.28464324017293 bayes_pls_golite062009
  • binding
  • 2.56809202445862 bayes_pls_golite062009
  • structure-specific DNA binding
  • 2.42858975345257 bayes_pls_golite062009
  • transcription factor activity
  • 2.32991522163341 bayes_pls_golite062009
  • chromatin binding
  • 2.32872787634324 bayes_pls_golite062009
  • transcription activator activity
  • 1.20800295439208 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.14039305317011 bayes_pls_golite062009
  • protein binding
  • 0.952480850696098 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.752135837564561 bayes_pls_golite062009
  • transcription repressor activity
  • 0.733541244206639 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.564341752288536 bayes_pls_golite062009
  • transcription factor binding
  • 0.547857728784058 bayes_pls_golite062009
  • catalytic activity
  • 0.263007611601737 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle