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Protein Overview: SEC7

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run GWT1 No Comments Hazbun TR, et al. (2003)
View Run MIH1 experimental1 - mih1-1 McCusker D, et al (2007)
View Run MIH1 experimental2 - mih1-2 McCusker D, et al (2007)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SEC7 Huh WK, et al. (2003)
View Data SEC7 and CHC1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..355] PSI-BLAST 11.221849 Heavy meromyosin subfragment
2 View Details [356..777] deduced N/A No confident structure predictions are available.
3 View Details [778..897] PSI-BLAST 520.36704 Exchange factor ARNO
4 View Details [898..1032] PSI-BLAST 520.36704 Exchange factor ARNO
5 View Details [1033..1325] ORFEUS 13.23 Constant regulatory domain of protein phosphatase 2a, pr65alpha
6 View Details [1326..1401] ORFEUS 13.23 Constant regulatory domain of protein phosphatase 2a, pr65alpha
7 View Details [1402..1708] ORFEUS 13.23 Constant regulatory domain of protein phosphatase 2a, pr65alpha
8 View Details [1709..1771] deduced N/A No confident structure predictions are available.
9 View Details [1772..2009] MSA 1.024942 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • ARF guanyl-nucleotide exchange factor activity
  • 6.57705646633597 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
  • 2.34270596875878 bayes_pls_golite062009
  • GTPase regulator activity
  • 2.33775275044058 bayes_pls_golite062009
  • enzyme regulator activity
  • 2.18282128472415 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
  • 2.13694141859871 bayes_pls_golite062009
  • small GTPase regulator activity
  • 1.9528150458215 bayes_pls_golite062009
  • binding
  • 1.48136085083473 bayes_pls_golite062009
  • protein binding
  • 0.709918436973955 bayes_pls_golite062009
    6 No functions predicted.
    7
    Term Confidence Notes
  • transcription regulator activity
  • 4.23589314549461 bayes_pls_golite062009
  • transcription factor activity
  • 3.20154674515543 bayes_pls_golite062009
  • binding
  • 1.86110799162977 bayes_pls_golite062009
  • transcription activator activity
  • 1.49121387344133 bayes_pls_golite062009
  • transcription repressor activity
  • 1.37470101715384 bayes_pls_golite062009
  • nucleic acid binding
  • 1.23329188282806 bayes_pls_golite062009
  • DNA binding
  • 1.13681181911191 bayes_pls_golite062009
  • protein binding
  • 1.08484616730639 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.716405160484334 bayes_pls_golite062009
  • structural molecule activity
  • 0.699916732836588 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.642134554528826 bayes_pls_golite062009
  • ligase activity
  • 0.480312224694405 bayes_pls_golite062009
  • catalytic activity
  • 0.22314902412029 bayes_pls_golite062009
  • transcription factor binding
  • 0.175826195692125 bayes_pls_golite062009
  • transporter activity
  • 0.157041289238914 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 0.11628064315417 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 0.0898225651928188 bayes_pls_golite062009
    8 No functions predicted.
    9 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle