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Protein Overview: TDP1

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TDP1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..222] PSI-BLAST 289.9897 Tyrosyl-DNA phosphodiesterase TDP1
2 View Details [223..268] PSI-BLAST 289.9897 Tyrosyl-DNA phosphodiesterase TDP1
3 View Details [269..287]
[461..486]
PSI-BLAST 289.9897 Tyrosyl-DNA phosphodiesterase TDP1
4 View Details [288..460]
[487..544]
PSI-BLAST 289.9897 Tyrosyl-DNA phosphodiesterase TDP1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • 3'-tyrosyl-DNA phosphodiesterase activity
  • 1.46693175347055 bayes_pls_golite062009
  • tyrosyl-DNA phosphodiesterase activity
  • 1.46693175347055 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.41591686174898 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.29668490323599 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.29429720882252 bayes_pls_golite062009
  • catalytic activity
  • 1.29236214516383 bayes_pls_golite062009
  • binding
  • 1.26667168593698 bayes_pls_golite062009
  • nucleic acid binding
  • 0.926017334343152 bayes_pls_golite062009
  • DNA binding
  • 0.840595330626189 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.235198647671849 bayes_pls_golite062009
  • protein binding
  • 0.162885453822356 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle