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Protein Overview: CCR4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CCR4 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..397] PSI-BLAST 16.221849 Leucine rich effector protein YopM
2 View Details [398..458] PSI-BLAST 13.69897 No description for 1k14A_ was found.
3 View Details [459..837] ORFEUS 14.32 DNA repair endonuclease Hap1

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • hydrolase activity
  • 3.03637986118891 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 2.85165370336889 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 2.64138912616286 bayes_pls_golite062009
  • transcription regulator activity
  • 2.38142407142222 bayes_pls_golite062009
  • nucleic acid binding
  • 2.36300991054709 bayes_pls_golite062009
  • DNA binding
  • 2.34848945028683 bayes_pls_golite062009
  • exonuclease activity
  • 2.30441725834613 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 2.03997717198568 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 1.84704109624149 bayes_pls_golite062009
  • exodeoxyribonuclease activity
  • 1.84015252069596 bayes_pls_golite062009
  • binding
  • 1.77207262408714 bayes_pls_golite062009
  • catalytic activity
  • 1.63030570728465 bayes_pls_golite062009
  • nuclease activity
  • 1.43406183661088 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.3192080792879 bayes_pls_golite062009
  • transcription repressor activity
  • 1.14505069034044 bayes_pls_golite062009
  • oxidoreductase activity
  • 1.01237142327007 bayes_pls_golite062009
  • ribonuclease activity
  • 0.921398762372674 bayes_pls_golite062009
  • transcription activator activity
  • 0.794530147502372 bayes_pls_golite062009
  • transcription factor binding
  • 0.676190329566283 bayes_pls_golite062009
  • protein binding
  • 0.477100720412367 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.456888438009074 bayes_pls_golite062009
  • phosphatase activity
  • 0.36890149558152 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
  • 0.323823757876148 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 0.299808718537723 bayes_pls_golite062009
  • endonuclease activity
  • 0.122198690326292 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle