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Protein Overview: btz-PB

General Information:
Name(s) found: btz-PB / FBpp0084591 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene barentsz is referred to in FlyBase by the symbol Dmel\btz (CG12878, FBgn0045862). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23525986..23529174. It has the cytological map location 98B1-98B2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: pole plasm protein localization; pole plasm oskar mRNA localization; oocyte microtubule cytoskeleton polarization. 8 alleles are reported. The phenotypes of these alleles are annotated with: abdomen; embryonic/first instar larval cuticle; pole cell; denticle belt. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDA]
    cytoplasm [IDA]
    Biological Process: pole plasm protein localization [IMP]
    [NOT]bicoid mRNA localization [IMP]
    pole plasm oskar mRNA localization [IMP][TAS]
    [NOT]oocyte microtubule cytoskeleton polarization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRRRSSSS SSEAENRRDP AMAEVEKPTA ATPPTDIPQA TAAPASEAPV AVTPTADTTV  60
   61 DVEPGTSPTQ EPNSNSHPHD SEYDTASDLE GGEDYDDEES ASGSASGSGS EEESETDDED 120
  121 DEVGSETDDG EGEQAMDRSV ADSEAQKKVD EDRSNPQYIP KRGTFYEHDD RTAETEGEIL 180
  181 IEPENGAGQA AAEPNGELNG LAAAGATPTG QTPQISQASK TMRKWQPASG GDRWSHDRFE 240
  241 ATEQAPKSRA ELLQTYGYDI RNEDAPPRAR RRRRYTRGPS KYSRNWEDEQ AYLKASNKER 300
  301 KPPRPQDFPA LNERKPRGPR TSSSREEKEN RRSVAAEGLV PEKQQPLASS SNPHRSQERE 360
  361 RERERERERD REPKNRNFGR MNGGPGRQNG MEFKKNNRGQ QLRERERGPD QLDNRNQKPS 420
  421 TPRSNQQQQP QQQPHHQQQP QQQRQPSQPQ QSPQTPLSTS NLSQRLQQVQ QRNDPSHVGS 480
  481 VQMHSLASQN QAPQQQQQQP LHQEQRNAPK RYSSLRRSQQ EASQHLAEQQ QQQMQQQLHL 540
  541 QQQQQQQQSQ IMIQDPHVLM QIAYQQQELQ AQLQTMQLGP PTAAGAVPTP PKPHAPPAAA 600
  601 YPQAQAAPYY VTGTEPVPVP VPQAPYVNPA SAAYLPTTPA AVAYAQAGPP VVTQPTPPPA 660
  661 QAPPATQPAQ PYQNYNTVGG TTYFVPPAQT TSRPSALPQR RPTNAIPILP PSEKHKVKGG 720
  721 AKEEGISDNI DHIIDNMFVQ RPSAFQATGE GATPGGGTKE EAAATPPAAE QNLQPVPATG 780
  781 QE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] FFAS03 1.18 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [125..351] PSI-BLAST 11.09691 No description for 2j0qI was found.
    3 View Details [352..497] deduced N/A No confident structure predictions are available.
    4 View Details [498..702] PSI-BLAST 5.69897 Sec24
    5 View Details [703..782] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle