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Protein Overview: Taf1-PB

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..135] PSI-BLAST 22.09691 TAF(II)230 TBP-binding fragment
2 View Details [136..188] deduced N/A No confident structure predictions are available.
3 View Details [189..389] MSA 1.020949 View MSA. No confident structure predictions are available.
4 View Details [390..470] deduced N/A No confident structure predictions are available.
5 View Details [471..534] deduced N/A No confident structure predictions are available.
6 View Details [535..622] deduced N/A No confident structure predictions are available.
7 View Details [623..880] deduced N/A No confident structure predictions are available.
8 View Details [881..1336] PSI-BLAST 4.522879 alpha-actinin
9 View Details [1337..1400] deduced N/A No confident structure predictions are available.
10 View Details [1401..1724] PSI-BLAST 49.045757 TAFII250 double bromodomain module
11 View Details [1725..1814] deduced N/A No confident structure predictions are available.
12 View Details [1815..2016] MSA 1.242988 View MSA. No confident structure predictions are available.
13 View Details [2017..2129] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5 No functions predicted.
6 No functions predicted.
7 No functions predicted.
8
Term Confidence Notes
  • cytoskeletal protein binding
  • 3.1249176514747 bayes_pls_golite062009
  • protein binding
  • 3.02658853804606 bayes_pls_golite062009
  • binding
  • 3.02588173330447 bayes_pls_golite062009
  • actin binding
  • 2.99249761866244 bayes_pls_golite062009
  • actin filament binding
  • 2.67692481578399 bayes_pls_golite062009
  • transcription regulator activity
  • 2.44577095508006 bayes_pls_golite062009
  • transcription activator activity
  • 2.01637187744715 bayes_pls_golite062009
  • protein complex binding
  • 1.83007463428411 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.17938200837598 bayes_pls_golite062009
  • protein dimerization activity
  • 0.909550969508159 bayes_pls_golite062009
  • identical protein binding
  • 0.650360032617391 bayes_pls_golite062009
  • structural molecule activity
  • 0.565745818602161 bayes_pls_golite062009
  • transcription factor binding
  • 0.563443610763849 bayes_pls_golite062009
  • receptor binding
  • 0.344679796081435 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.32199002401243 bayes_pls_golite062009
    9 No functions predicted.
    10 No functions predicted.
    11 No functions predicted.
    12 No functions predicted.
    13 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle