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Protein Overview: YNFE_ECOLI

General Information:
Name(s) found: YNFE_ECOLI [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Putative dimethyl sulfoxide reductase chain ynfE precursor (EC 1.8.99.-) (DMSO reductase) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 808 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNERMVGI SRRTLVKSTA IGSLALAAGG FSLPFTLRNA AAAVQQAREK VVWGACSVNC  60
   61 GSRCALRLHV KDNEVTWVET DNTGSDEYGN HQVRACLRGR SIRRRINHPD RLNYPMKRVG 120
  121 KRGEGKFERI SWDEALDTIA SSLKKTVEQY GNEAVYIQYS SGIVGGNMTR SSPSASAVKR 180
  181 LMNCYGGSLN QYGSYSTAQI SCAMPYTYGS NDGNSTTDIE NSKLVVMFGN NPAETRMSGG 240
  241 GITYLLEKAR EKSNAKMIVI DPRYTDTAAG REDEWLPIRP GTDAALVAGI AWVLINENLV 300
  301 DQPFLDKYCV GYDEKTLPAD APKNGHYKAY ILGEGDDKTA KTPQWASQIT GIPEDRIIKL 360
  361 AREIGTAKPA YICQGWGPQR QANGELTARA IAMLPILTGN VGISGGNSGA RESTYTITIE 420
  421 RLPVLDNPVK TSISCFSWTD AIDHGPQMTA IRDGVRGKDK LDVPIKFIWN YAGNTLVNQH 480
  481 SDINKTHEIL QDESKCEMIV VIENFMTSSA KYADILLPDL MTVEQEDIIP NDYAGNMGYL 540
  541 IFLQPVTSEK FERKPIYWIL SEVAKRLGPD VYQKFTEGRT QEQWLQHLYA KMLAKDPALP 600
  601 SYDELKKMGI YKRKDPNGHF VAYKAFRDDP EANPLKTPSG KIEIYSSRLA EIARTWELEK 660
  661 DEVISPLPVY ASTFEGWNSP ERRTFPLQLF GFHYKSRTHS TYGNIDLLKA ACRQEVWINP 720
  721 IDAQKRGIAN GDMVRVFNHR GEVRLPAKVT PRILPGVSAM GQGAWHEANM SGDKIDHGGC 780
  781 VNTLTTLRPS PLAKGNPQHT NLVEIEKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..808] PSI-BLAST 152.0 OXIDIZED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nitrate reductase activity
    		•  13.0318477645691 bayes_pls_golite062009
  • oxidoreductase activity, acting on other nitrogenous compounds as donors
    		•  12.1969883329386 bayes_pls_golite062009
  • trimethylamine-N-oxide reductase activity
    		•  8.75612712598998 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  6.81363258746891 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  6.68295624624715 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  5.7442724322527 bayes_pls_golite062009
  • metal cluster binding
    		•  5.7442724322527 bayes_pls_golite062009
  • molybdenum ion binding
    		•  3.31971125919934 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor
    		•  2.54554723799271 bayes_pls_golite062009
  • catalytic activity
    		•  1.93875927205186 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.8662488889516 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.84836110501265 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.29705810885029 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.27093915206504 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  0.968773059107375 bayes_pls_golite062009
  • lyase activity
    		•  0.603656450860878 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.134493772161849 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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