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Protein Overview: AAER_ECOLI, YHCS...

General Information:
Name(s) found: YHCS_ECOLI [Swiss-Prot]
AAER_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|7448776|pir||E65116 hypothetical protein b3243 - Escherichia coli (strain K-12) [NCBI NR]
  • gi|606182|gb|AAA58045.1| ORF_o309 [Escherichia coli] [NCBI NR]
  • gi|54042784|sp|P67662.1|AAER_ECOLI RecName: Full=HTH-type transcriptional activator aaeR [NCBI NR]
  • pir||D91143 probable transcription regulator LYSR-type [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209757706|gb|ACI77165.1| putative transcriptional regulator LYSR-type [Escherichia coli] [NCBI NR]
  • gi|209757704|gb|ACI77164.1| putative transcriptional regulator LYSR-type [Escherichia coli] [NCBI NR]
  • gi|209757702|gb|ACI77163.1| putative transcriptional regulator LYSR-type [Escherichia coli] [NCBI NR]
  • gi|209757700|gb|ACI77162.1| putative transcriptional regulator LYSR-type [Escherichia coli] [NCBI NR]
  • gi|209757698|gb|ACI77161.1| putative transcriptional regulator LYSR-type [Escherichia coli] [NCBI NR]
  • (P67662) Putative HTH-type transcriptional regulator yhcS [Swiss-Prot]
  • HTH-type transcriptional activator aaeR - Escherichia coli [Swiss-Prot]
  • putative transcriptional regulator (LysR family); putative transcriptional regulator LYSR-type [Escherichia coli K12]gi|15833370|ref|NP_312143.1| putative transcriptional regulator LYSR-type [Escherichia coli O157:H7]gi|26249824|ref|NP_755864.1| Hypothe [nrdb_11152004_Chlamydomonas]
  • HTH-type transcriptional activator aaeR [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • HTH-type transcriptional activator AaeR OS=Escherichia coli (strain K12) GN=aaeR PE=4 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • HTH-type transcriptional activator AaeR OS=Escherichia coli (strain K12) GN=aaeR PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLKRMSVF AKVVEFGSFT AAARQLQMSV SSISQTVSKL EDELQVKLLN RSTRSIGLTE  60
   61 AGRIYYQGCR RMLHEVQDVH EQLYAFNNTP IGTLRIGCSS TMAQNVLAGL TAKMLKEYPG 120
  121 LSVNLVTGIP APDLIADGLD VVIRVGALQD SSLFSRRLGA MPMVVCAAKS YLTQYGIPEK 180
  181 PADLSSHSWL EYSVRPDNEF ELIAPEGIST RLIPQGRFVT NDPMTLVRWL TAGAGIAYVP 240
  241 LMWVINEINR GELEILLPRY QSDPRPVYAL YTEKDKLPLK VQVVINSLTD YFVEVGKLFQ 300
  301 EMHGRGKEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 39.154902 No description for 2h9qA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.37

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle