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Protein Overview: YBIB_ECOLI

General Information:
Name(s) found: YBIB_ECOLI [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Hypothetical protein ybiB - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 320 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYRKIIKEI GRGKNHARDL DRDTARGLYA HMLNGEVPDL ELGGVLIALR IKGEGEAEML  60
   61 GFYEAMQNHT IKLTPPAGKP MPIVIPSYNG ARKQANLTPL LAILLHKLGF PVVVHGVSED 120
  121 PTRVLTETIF ELMGITPTLH GGQAQAKLDE HQPVFMPVGA FCPPLEKQLA MRWRMGVRNS 180
  181 AHTLAKLATP FAEGEALRLS SVSHPEYIGR VAKFFSDIGG RALLMHGTEG EVYANPQRCP 240
  241 QINLIDREGM RVLYEKQDTA GSELLPQAKD PETTAQWIER CLAGSEPIPE SLKIQMACCL 300
  301 VATGEAATIS DGLARVNQAF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..320] PSI-BLAST 80.30103 Anthranilate phosphoribosyltransferase (TrpD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46176712656049 bayes_pls_golite062009
  • transferase activity
    		•  0.81464991834813 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.66332294370811 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  0.39419152146588 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle