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Protein Overview: orf19.5887, orf1...

General Information:
Name(s) found: orf19.5887 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13308 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
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  • NUP85 CGDID:CAL0002462 Assembly 19, Contig19-10236 (59883, 57562) CDS, reverse complemented, translated using codon table 12 (773 residues)||Protein not essential for viability; similar to S. cerevisiae Nup85p, which is a subunit of the nuclear pore compl [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • NUP85 CGDID:CAL0002462 Assembly 19, Contig19-20236 (59866, 57545) CDS, reverse complemented, translated using codon table 12 (773 residues)||Protein not essential for viability; similar to S. cerevisiae Nup85p, which is a subunit of the nuclear pore compl [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 773 amino acids

    Gene Ontology:
    Cellular Component: Nup107-160 complex [IEA]
    Biological Process: mRNA export from nucleus [IEA]
    nuclear envelope organization [IEA]
    biofilm formation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEYTNFESK FDDIDMLEIP EDDDGENSID NSISSETEGI SDSSDSSKSS YDQWSPVAIF  60
   61 KSDKEYIDLS DWLNTQKSLE FKFDVQKYRK GIEKSRPFDE KYILYVNNMF KIIQKLTEDD 120
  121 ITRFDLEEDD SPIGLVMDSM GSKAKQVRKF KKIDEALREI IDYLQDLVNS IPKEEQESYD 180
  181 SQCLQHVLYI LECFEANNFY FDIQQKPELI IKWVNTFDPK PDPELLNDVI VNTPQPYLHP 240
  241 RFWNTCISQL LTRGLFTQIH EVIEHSQYQE LKEKCPELYA VIGDMDTLLS NYTSYSSKGQ 300
  301 FTAWKLLACE FRDSLSSVRN ESITETKHKL IIDQIYDLAC IFTGLPKTIS SYCDTWYEVY 360
  361 LALSLYQVRD SNEVYIDYFK TAVSEKPPSD IFDDENENLD GLTEACFLNI LENNFLKVLE 420
  421 TLHELDPPTT AYLAELMELR FLLRGYYFDV TVTSSASFED LLNRRIVSEY FLTRHAYDCL 480
  481 NIHELVPVGI GLLLNNVVCT SNNAVSANRK VIATFLPNYI CNTNDDLEWA LTICANLNLV 540
  541 STARQLYYQA GLKSLEEGYM YEALNNFVNC YDPTLLSGEN HSEGMKKVHY IVWDLIFANC 600
  601 LVHNRPIKDE LINNIVDKKV DLNFKIHPVI QQCLAPYAVL KEFYETLPQR DIKLSNKLSK 660
  661 LIHLLKFNYL PKKFVPLLLA QFIPFLSEPN TTFQLPDLVI IIELLDNYES DRNEKELKEG 720
  721 ADLYLYSINN IESDADENDW RKLVGKDNLP KDIDSFTRLL RNLIAAKVGK VFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle