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Protein Overview: pmp-5

General Information:
Name(s) found: pmp-5 / CE36505 [WormBase]
Description(s) found:
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  • WBGene00004062 locus:pmp-5 status:Partially_confirmed UniProt:Q86S26 protein_id:CCD71213.1 [WormBase]
  • gi|72000518|ref|NP_872135.2| Peroxisomal Membrane Protein related family member (pmp-5) [Caenorhabditis elegans] [NCBI NR]
  • gi|45430251|gb|AAO25995.2| Peroxisomal membrane protein related protein 5, isoform b [Caenorhabditis elegans] [NCBI NR]
  • Peroxisomal membrane protein related protein 5, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed TR:Q86S26 protein_id:AAO25995.2 [wormpep150.fasta]
  • 36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed TR:Q86S26 protein_id:AAO25995.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed UniProt:Q86S26_CAEEL protein_id:AAO25995.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed UniProt:Q86S26_CAEEL protein_id:AAO25995.2| [wormORF-contam.fasta]
  • Peroxisomal Membrane Protein related family member (pmp-5) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed UniProt:Q86S26 protein_id:AAO25995.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36505 WBGene00004062 locus:pmp-5 status:Partially_confirmed UniProt:Q86S26 protein_id:CCD71213.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Peroxisomal Membrane Protein related OS=Caenorhabditis elegans GN=pmp-5 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 626 amino acids

    Gene Ontology:
    Cellular Component: Gram-negative-bacterium-type cell wall [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    outer membrane-bounded periplasmic space [IEALink to PubMed article]
    Biological Process: cell division [IEALink to PubMed article]
    cobalt ion transport [IEALink to PubMed article]
    cytochrome complex assembly [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: ATPase activity [IEALink to PubMed article]
    nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATPase activity, coupled to transmembrane movement of substances [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    cysteine-type peptidase activity [IEALink to PubMed article]
    toxin transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLQVIEKK FEFGFRVFYN LFRLFPLIYS NTWLTLVLTA VTIAASVGNE IVNYKTGVIP  60
   61 GKFYVALIEK DEPKFWHIFW IASLCYVGLC LLMALMNFFS WCLYIQQRKN LVQCLHKLYY 120
  121 KNNFYYQLNG VDDHGIDNPD QRITQDADKL TKLLGTSIIP TVLLSPFIIS YYGVRVWETA 180
  181 GGWGFGMIVA YFLIGVIINR ILIGPITPWA ARVEKAEGDF RYKHVSVRVN AEESAFYKSA 240
  241 EFEHVFSDLS FDVLFKRLLN FMCWRFPSQF FQSFFDYYGG CMSYILQLFP LFVFHMYDNL 300
  301 TPAELSGQIS NNAFYFIYLI NCFTRLTDLA MNIAELGGYI MRFYSEHFCN FCLVSEFVDT 360
  361 GKLHQSGIKN EAFRRNSELP EKASGDDNLI ETEHLSFGPP TNSNIRIIEM GGFMIFVLIL 420
  421 FQSGYTDLTF HLPRNKTLLI TGDSGIGKTS LMRVIADMWP HQGILKKHFK KTDAYFLPQK 480
  481 PYFPVGRLSL KQQLVFPAEE NEEKSGNDEE IVRILHELKL GHLLPIVGNI HDSVDFEWQE 540
  541 TLSPGEQQRL CFARMILAEP TVAFLDESTC NVDEGMENAM YEMLRKHSIT YISVGHRKSL 600
  601 RSHHDFELRI PSSSSFLFHE IHNQKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..626] PSI-BLAST 124.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  5.57844095962502 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  5.5689620139321 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  5.55992639965745 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  5.50005167063544 bayes_pls_golite062009
  • lipid transporter activity
    		•  5.43964691043504 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  4.98276715440477 bayes_pls_golite062009
  • ATPase activity
    		•  4.69795387297193 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  4.45923622153365 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  4.39781350157199 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  4.38133275795019 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  4.38085303582726 bayes_pls_golite062009
  • transporter activity
    		•  3.71239480053329 bayes_pls_golite062009
  • hydrolase activity
    		•  3.14498892233323 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.13960906549884 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1318898376276 bayes_pls_golite062009
  • ATP binding
    		•  3.01346604299372 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  2.96271391116269 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  2.91131545957759 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  2.70262534541085 bayes_pls_golite062009
  • ribonucleotide binding
    		•  2.70178191749524 bayes_pls_golite062009
  • purine nucleotide binding
    		•  2.6583477492092 bayes_pls_golite062009
  • nucleotide binding
    		•  2.62374702628143 bayes_pls_golite062009
  • binding
    		•  1.69327117652379 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  1.37783759788533 bayes_pls_golite062009
  • peptide transporter activity
    		•  1.19353064661766 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.08692822631118 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.977237423302079 bayes_pls_golite062009
  • motor activity
    		•  0.677658554107 bayes_pls_golite062009
  • cholesterol transporter activity
    		•  0.644421039250979 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.557919489256916 bayes_pls_golite062009
  • sterol transporter activity
    		•  0.51525091036229 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  0.38711726712063 bayes_pls_golite062009
  • protein binding
    		•  0.378225828131122 bayes_pls_golite062009
  • catalytic activity
    		•  0.368034275052766 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  0.278494397068437 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  0.213018989352421 bayes_pls_golite062009
  • GTPase activity
    		•  0.20164416416912 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.123304946374679 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.11674780318211 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0775601177068852 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle