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Protein Overview: syg-1

General Information:
Name(s) found: syg-1 / CE37121 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00006365 locus:syg-1 status:Partially_confirmed UniProt:H2L0B4 protein_id:CCD72282.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISSLink to PubMed article]
    synapse [IDALink to PubMed article]
    axon [IDALink to PubMed article]
    Biological Process: synapse organization [IMPLink to PubMed article]
    cell-cell signaling [IMPLink to PubMed article]
    branching morphogenesis of a nerve [IMPLink to PubMed article]
    synaptic target recognition [IMPLink to PubMed article]
    Molecular Function: transmembrane receptor activity [ISSLink to PubMed article]
    immunoglobulin binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRWQTWPLL LLFQLVTCQQ LQQRIVEAPK DTLAAVGETA ILTCRVEHQQ GPVQWMKDDF  60
   61 GLGTDRDKPL PGNKRYRMVG SAANGEYNLE ISNVTLFDDD DFACQISESD HAKAVVSSKA 120
  121 KLTVLVRPTP PKIVKSHHSL KAIAGDPITQ SCLSRKGKPP PTIGWAIASD EHGKHIVSWL 180
  181 GESRSKFGGI HAKPEISQET VIAHVNETTQ VEEGGNNSRE DSSIYSIMSN LSFIPRPEDD 240
  241 HKYLICISQH MTFPNKIEVD SVKLSLRYAP QINLTVASKL PLRENGSALL ACNVNAKPLD 300
  301 NVKISWYKGN QKLRETGDTL TFETLKMEDH NRDIFCEATN EIGTTRGSIK LNVAFGARIM 360
  361 STSQDKEVNE GDNAFFHCAT LANPAPAIFW TRGDSDEIIG HGENLTLENV RTWQQGNYNC 420
  421 TATVEGFRKQ ILSHYLHIRG PPTVSMKDEV SASLDEATEI ICEISGRPKT NNVRWTVNGK 480
  481 EINFNNGRIT VHQYPKPYGK ESILKIKDLK EEDFGVYNCS ANNGLGFDNR GTLLKKRNIL 540
  541 DWIVITAKFD RMVALAIISA GVLLVSLLCC LCMCRSNCRS RKSKFIDDQS DVTVKCEALD 600
  601 GQYFPEMYSS SPVDNVHLST KDYISIPQNN PDLDFLGATG SFGPPGGLYP KCFNNSANEY 660
  661 IYNRYVRRGD ERQIAGYGDA TGSGDSQNVQ LQLPLVAGSG PTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..703] PSI-BLAST 45.221849 Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle