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Protein Overview: gi|15234737, gi|...

General Information:
Name(s) found: gi|7267296 [NCBI NR]
gi|25407335 [NCBI NR]
gi|15234737 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|7267296|emb|CAB81078.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||D85067 hypothetical protein AT4g05360 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15234737|ref|NP_192445.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromosome [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA][ISS]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIKDQKGK EHDHSQCRRY VLQSYLLRTE HISPNSTRNI NMITQDDSLC LLSISIYTLN  60
   61 SSHASLWLFT RSEEESADFG ESEDPSKTVR KRKKLSSSKL GFRRLDNQSK KDQLFNEPLF 120
  121 TGFSNVLLSV FKKDCVAKSY FAAPKEPASV PVSSPTREAE TEINSASPVT QSTVPDSTNQ 180
  181 ESTVQRSSGQ QTEHFQGVAL KFVLPGLNIL EYMLSPPPRS SPFRTNGFTI HPETWETGSY 240
  241 RTQPSTSNNT EELHFLEEGV NTPVRSPVTQ DSGGFSGRTR ALAQHLKERY SGYLSLNKIL 300
  301 EGKTRKIAAR MFYETLGEVP EIVQKIIQEV RQSLKSRLME ILRLPFKKRF SWNERNRALH 360
  361 EFKVDGNKEV LYKSSKGKRC FECKGFRHMC SECANLMKEK EKKFIMSDSE IDSDDGEELK 420
  421 NLVAFTTFES SIASASASGP TSASATGSTS ASATGPATGS DNDQSDDDDL SISDEEFAEN 480
  481 YKALYEHCVK VVEENSVLTK EKLKLEAKVV KTLKFAAEKE EEASQLEETQ KNLRMLNNGT 540
  541 KKLGHILSIG KTDKCGLGFK GNPSKSDPVF VYGGKITSAS GTVKETATVA EIASDTRTDS 600
  601 RTDTETTSGT RKVQKLQSEP RRVFRPVCHH CGVVGHIRPR CFRLLREKNR LMNAYDVRFH 660
  661 GPKCYHYGVQ GHIKRNCFRF IRECSHEGLR RNKVWVRKDD FHGSGGENDD VFGDVVLELE 720
  721 LMSSQHSQKG GDLKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] FFAS03 1.15 Photosynthetic reaction centre (cytochrome subunit)
    2 View Details [263..495] deduced N/A No confident structure predictions are available.
    3 View Details [496..735] MSA 2.183997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle