YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|11357819, gi|...

General Information:
Name(s) found: gi|7630011 [NCBI NR]
gi|15232361 [NCBI NR]
gi|11357819 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|7630011|emb|CAB88353.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232361|ref|NP_190959.1| malate dehydrogenase-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T45931 hypothetical protein F5K20.210 - Arabidopsis thaliana [NCBI NR]
  • (Q9M335) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357819|pir||T45931 hypothetical protein F5K20.210 - Arabidopsis thalianagi|15232361|ref|NP_190959.1| malate dehydrogenase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Malate dehydrogenase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | malate dehydrogenase-related | chr3:19970834-19971424 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | malate dehydrogenase-related | chr3:19959856-19960446 REVERSE LENGTH=108 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Malate dehydrogenase-like protein OS=Arabidopsis thaliana GN=F5K20_210 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 108 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    malate metabolic process [IEA]
    Molecular Function: L-malate dehydrogenase activity [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLRNSDPYA MISFLKSLIR ALDGDDDVFD FAFVASSVTE LPYFATRTKI GKKRIEEVID  60
   61 SDLQGLAKYE ERAIKAIKPR VKVTIEKDIT LLQRTFVAIS VYKLLIVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] PSI-BLAST 26.39794 Malate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.14023531388481 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.35135191441759 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.289188075300681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle